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Y0V

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C1doub1.40Å1.41ÅAromatic
C11C1sing1.47Å1.50Å
C1C6sing1.40Å1.39ÅAromatic
C5I1sing2.10Å2.14Å
C4N1sing1.40Å1.41Å
N1C7sing1.37Å1.38ÅAromatic
N1C10sing1.37Å1.38ÅAromatic
C11O1sing1.35Å1.27Å
O1HO1sing0.97Å0.95Å
C2C3sing1.38Å1.40ÅAromatic
C2H2sing1.08Å1.08Å
I2C3sing2.09Å2.13Å
C6O2sing1.36Å1.37Å
O2HO2sing0.97Å0.95Å
C3C4doub1.39Å1.41ÅAromatic
O3C11doub1.22Å1.27Å
C4C5sing1.39Å1.41ÅAromatic
C6C5doub1.38Å1.41ÅAromatic
C7C8doub1.35Å1.37ÅAromatic
C7H7sing1.08Å1.08Å
C8C9sing1.41Å1.42ÅAromatic
C8H8sing1.08Å1.08Å
C10C9doub1.35Å1.38ÅAromatic
C9H9sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C11119.1°120.2°
C2C1C6119.4°119.7°
C1C2C3121.7°120.0°
C1C2H2119.1°120.0°
C11C1C6121.5°120.1°
C1C11O1117.4°120.0°
C1C11O3115.7°120.0°
C1C6O2118.3°120.1°
C1C6C5120.0°119.7°
I1C5C4121.6°120.0°
I1C5C6118.1°120.0°
C4N1C7124.0°125.7°
C4N1C10127.5°125.7°
N1C4C3123.7°119.9°
N1C4C5116.1°119.9°
C7N1C10108.5°108.7°
N1C7C8108.9°108.2°
N1C7H7125.6°125.9°
N1C10C9107.9°108.2°
N1C10H10126.1°126.0°
C11O1HO1109.5°117.0°
O1C11O3126.8°120.0°
C3C2H2119.1°120.0°
C2C3I2115.3°119.9°
C2C3C4118.4°120.2°
I2C3C4126.3°119.9°
C6O2HO2109.5°114.0°
O2C6C5121.8°120.1°
C3C4C5120.2°120.2°
C4C5C6120.3°120.0°
C8C7H7125.6°125.9°
C7C8C9106.9°107.5°
C7C8H8126.5°126.2°
C9C8H8126.6°126.2°
C8C9C10107.8°107.4°
C8C9H9126.1°126.3°
C10C9H9126.1°126.3°
C9C10H10126.0°125.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C11C6179.9°179.8°
C2C1C11O1175.8°0.2°
C1C2C3H2180.0°180.0°
C1C2C3I2179.8°180.0°
C2C1C6O2179.9°180.0°
C1C2C3C40.3°0.0°
C2C1C11O34.5°179.7°
C2C1C6C50.1°0.1°
C1C11O1O3179.7°179.9°
C1C11O1HO1179.7°180.0°
C11C1C2C3179.9°179.7°
C11C1C2H20.1°0.3°
C11C1C6O20.0°0.2°
C11C1C6C5179.8°179.7°
C1C6C5I1179.4°180.0°
C6C1C11O14.1°180.0°
C6C1C2C30.0°0.0°
C6C1C2H2180.0°180.0°
C1C6O2C5179.8°179.9°
C1C6O2HO2180.0°90.0°
C6C1C11O3175.6°0.1°
C1C6C5C40.1°0.0°
I1C5C4N11.5°0.0°
I1C5C6O20.3°0.1°
I1C5C4C3179.7°179.9°
I1C5C4C6179.3°180.0°
C4N1C7C10178.9°179.8°
N1C4C3C2179.2°180.0°
N1C4C3I21.4°0.0°
N1C4C3C5178.7°180.0°
N1C4C5C6179.1°180.0°
C4N1C7C8178.6°179.8°
C4N1C7H71.5°0.2°
C4N1C10C9178.8°179.8°
C4N1C10H101.2°0.3°
C7N1C4C3103.9°65.0°
C7N1C4C574.8°115.1°
N1C7C8H7180.0°180.0°
N1C7C8C90.5°0.0°
N1C7C8H8179.5°180.0°
C7N1C10C90.1°0.0°
C7N1C10H10179.9°180.0°
C10N1C4C377.4°115.3°
C10N1C4C5103.9°64.7°
C10N1C7C80.4°0.0°
C10N1C7H7179.6°180.0°
N1C10C9C80.2°0.0°
N1C10C9H10180.0°180.0°
N1C10C9H9179.7°180.0°
HO1O1C11O30.0°0.1°
C2C3I2C4179.5°180.0°
C2C3C4C50.5°0.1°
H2C2C3I20.2°0.0°
H2C2C3C4179.7°180.0°
I2C3C4C5179.9°180.0°
O2C6C5C4179.7°179.9°
HO2O2C6C50.2°90.0°
C3C4C5C60.3°0.0°
C7C8C9H8180.0°180.0°
C7C8C9C100.5°0.0°
C7C8C9H9179.5°180.0°
H7C7C8C9179.5°180.0°
H7C7C8H80.5°0.0°
C8C9C10H9180.0°179.9°
C8C9C10H10179.8°180.0°
H8C8C9C10179.6°180.0°
H8C8C9H90.5°0.1°
H9C9C10H100.3°0.0°

220113

PDB entries from 2024-05-22

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