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Y08

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C11N1sing1.35Å1.32Å
N1C12sing1.47Å1.50Å
N1HN1sing0.97Å1.00Å
O1C04sing1.43Å1.49Å
O1HO1sing0.97Å0.95Å
C17N2sing1.47Å1.48Å
C18N2sing1.35Å1.37Å
N2C16sing1.47Å1.48Å
O2C06sing1.43Å1.51Å
O2HO2sing0.97Å0.95Å
O3C05sing1.43Å1.49Å
O3HO3sing0.97Å0.95Å
C11O4doub1.21Å1.23Å
O5C18doub1.21Å1.24Å
C22O6sing1.43Å1.48Å
O6C07sing1.43Å1.44Å
C02C01sing1.51Å1.51Å
C09C01sing1.53Å1.51Å
C01C10sing1.53Å1.55Å
C01C08sing1.53Å1.52Å
C03C02doub1.31Å1.33Å
C02H02sing1.08Å1.08Å
C04C03sing1.51Å1.49Å
C03H03sing1.08Å1.08Å
C05C04sing1.53Å1.54Å
C04H04sing1.09Å1.10Å
C05C06sing1.53Å1.52Å
C05H05sing1.09Å1.10Å
C06C07sing1.53Å1.51Å
C06H06sing1.09Å1.10Å
C07C11sing1.51Å1.50Å
C07H07sing1.09Å1.10Å
C08H08sing1.09Å1.10Å
C08H08Asing1.09Å1.10Å
C08H08Bsing1.09Å1.10Å
C09H09sing1.09Å1.10Å
C09H09Asing1.09Å1.10Å
C09H09Bsing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C10H10Bsing1.09Å1.10Å
C12C13sing1.53Å1.52Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C13C14sing1.53Å1.55Å
C13C17sing1.53Å1.57Å
C13H13sing1.09Å1.10Å
C14C15sing1.53Å1.55Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C15C16sing1.53Å1.57Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
C16H16sing1.09Å1.10Å
C16H16Asing1.09Å1.10Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
C18C19sing1.51Å1.56Å
C20C19sing1.53Å1.59Å
C21C19sing1.53Å1.51Å
C19H19sing1.09Å1.10Å
C20C21sing1.53Å1.53Å
C20H20sing1.09Å1.10Å
C20H20Asing1.09Å1.10Å
C21H21sing1.09Å1.10Å
C21H21Asing1.09Å1.10Å
C22H22sing1.09Å1.10Å
C22H22Asing1.09Å1.10Å
C22H22Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C11N1C12123.2°120.0°
C11N1HN1118.4°120.0°
N1C11O4120.8°120.0°
N1C11C07118.0°120.0°
C12N1HN1118.4°120.0°
N1C12C13111.8°109.4°
N1C12H12108.9°109.5°
N1C12H12A108.9°109.5°
C04O1HO1109.5°114.1°
O1C04C03110.6°109.4°
O1C04C05104.5°109.5°
O1C04H04110.8°109.5°
C17N2C18123.5°120.6°
C17N2C16112.6°118.7°
N2C17C13107.3°108.8°
N2C17H17110.0°109.6°
N2C17H17A110.0°109.6°
C18N2C16123.8°120.6°
N2C18O5116.4°120.0°
N2C18C19120.2°120.0°
N2C16C15110.6°108.8°
N2C16H16109.2°109.6°
N2C16H16A109.2°109.6°
C06O2HO2109.5°114.0°
O2C06C05101.5°109.5°
O2C06C07108.9°109.4°
O2C06H06110.9°109.5°
C05O3HO3109.5°114.0°
O3C05C04110.1°109.5°
O3C05C06109.2°109.5°
O3C05H05109.0°109.4°
O4C11C07121.1°120.0°
O5C18C19122.4°120.0°
C22O6C07111.0°114.0°
O6C22H22109.5°109.5°
O6C22H22A109.4°109.5°
O6C22H22B109.5°109.5°
O6C07C06104.5°109.5°
O6C07C11112.6°109.5°
O6C07H07110.9°109.5°
C02C01C09111.8°109.5°
C02C01C10109.6°109.5°
C02C01C08106.7°109.5°
C01C02C03125.4°120.0°
C01C02H02117.3°119.9°
C09C01C10106.2°109.4°
C09C01C08111.5°109.5°
C01C09H09109.5°109.5°
C01C09H09A109.5°109.4°
C01C09H09B109.4°109.5°
C10C01C08111.2°109.5°
C01C10H10109.5°109.5°
C01C10H10A109.5°109.5°
C01C10H10B109.5°109.5°
C01C08H08109.5°109.5°
C01C08H08A109.5°109.5°
C01C08H08B109.5°109.5°
C03C02H02117.3°120.0°
C02C03C04115.9°120.0°
C02C03H03122.0°120.0°
C04C03H03122.0°120.0°
C03C04C05109.8°109.5°
C03C04H04110.8°109.5°
C05C04H04110.1°109.5°
C04C05C06111.7°109.5°
C04C05H05108.3°109.5°
C06C05H05108.6°109.5°
C05C06C07113.6°109.5°
C05C06H06110.7°109.5°
C07C06H06110.8°109.5°
C06C07C11108.8°109.5°
C06C07H07109.9°109.5°
C11C07H07110.1°109.5°
H08C08H08A109.5°109.4°
H08C08H08B109.5°109.5°
H08AC08H08B109.5°109.5°
H09C09H09A109.5°109.4°
H09C09H09B109.5°109.5°
H09AC09H09B109.5°109.5°
H10C10H10A109.5°109.5°
H10C10H10B109.5°109.4°
H10AC10H10B109.5°109.4°
C13C12H12108.9°109.5°
C13C12H12A108.9°109.5°
C12C13C14103.2°109.5°
C12C13C17107.5°109.5°
C12C13H13111.8°109.5°
H12C12H12A109.4°109.5°
C14C13C17111.8°109.3°
C14C13H13111.2°109.5°
C13C14C15110.6°109.6°
C13C14H14109.2°109.5°
C13C14H14A109.2°109.5°
C17C13H13111.1°109.5°
C13C17H17110.1°109.6°
C13C17H17A110.0°109.6°
C15C14H14109.2°109.4°
C15C14H14A109.2°109.5°
C14C15C16113.5°109.3°
C14C15H15108.5°109.5°
C14C15H15A108.5°109.5°
H14C14H14A109.5°109.4°
C16C15H15108.4°109.5°
C16C15H15A108.5°109.5°
C15C16H16109.2°109.6°
C15C16H16A109.2°109.5°
H15C15H15A109.4°109.5°
H16C16H16A109.5°109.7°
H17C17H17A109.5°109.7°
C18C19C20115.1°117.5°
C18C19C21132.4°117.5°
C18C19H19112.2°115.5°
C20C19C2159.2°60.0°
C20C19H19111.8°117.5°
C19C20C2157.9°60.0°
C19C20H20120.3°117.5°
C19C20H20A120.3°117.5°
C21C19H19113.0°117.5°
C19C21C2063.0°60.0°
C19C21H21119.5°117.5°
C19C21H21A119.5°117.5°
C21C20H20120.4°117.5°
C21C20H20A120.3°117.5°
C20C21H21119.5°117.4°
C20C21H21A119.5°117.5°
H20C20H20A109.5°115.5°
H21C21H21A109.5°115.6°
H22C22H22A109.5°109.5°
H22C22H22B109.5°109.5°
H22AC22H22B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C11N1C12HN1180.0°179.7°
N1C11O4C07177.4°180.0°
N1C11C07O6150.1°175.0°
N1C11C07C0694.6°65.0°
N1C11C07H0725.9°55.0°
C11N1C12C1399.0°179.7°
C11N1C12H12140.6°60.3°
C11N1C12H12A21.3°59.7°
C12N1C11O41.1°0.0°
C12N1C11C07176.4°180.0°
N1C12C13H12120.4°120.0°
N1C12C13H12A120.4°120.0°
N1C12H12H12A118.9°120.1°
N1C12C13C1476.2°65.1°
N1C12C13C17165.5°175.1°
N1C12C13H1343.4°55.1°
HN1N1C11O4178.9°179.7°
HN1N1C11C073.6°0.3°
HN1N1C12C1380.9°0.1°
HN1N1C12H1239.4°120.0°
HN1N1C12H12A158.7°119.9°
O1C04C05O343.3°65.0°
O1C04C03C02135.6°5.0°
O1C04C03C05114.8°119.9°
O1C04C03H04123.3°120.0°
O1C04C03H0344.4°175.0°
O1C04C05H04119.1°120.1°
O1C04C05C06164.7°55.1°
O1C04C05H0575.8°175.1°
HO1O1C04C03180.0°60.0°
HO1O1C04C0561.9°59.9°
HO1O1C04H0456.7°180.0°
C17N2C18C16176.9°179.7°
C17N2C18O50.1°0.3°
N2C17C13C12172.6°174.6°
N2C17C13C1460.1°54.6°
N2C17C13H17119.7°119.8°
N2C17C13H17A119.6°119.8°
N2C17C13H1364.8°65.4°
C17N2C16C1560.0°53.6°
C17N2C16H16179.9°173.4°
C17N2C16H16A60.2°66.2°
N2C17H17H17A121.0°120.3°
C17N2C18C19168.7°179.8°
N2C18O5C19168.6°179.9°
C18N2C17C13117.8°126.7°
C18N2C16C15122.8°126.7°
C18N2C16H162.7°6.9°
C18N2C16H16A117.0°113.6°
C18N2C17H17122.5°113.6°
C18N2C17H17A1.8°6.8°
N2C18C19C20156.8°179.9°
N2C18C19C2186.6°111.2°
N2C18C19H1973.9°34.4°
C16N2C18O5177.1°180.0°
C16N2C17C1364.9°53.6°
N2C16C15C1449.3°54.6°
N2C16C15H16120.2°119.8°
N2C16C15H16A120.2°119.8°
N2C16C15H15169.9°174.6°
N2C16C15H15A71.4°65.4°
N2C16H16H16A119.5°120.4°
C16N2C17H1754.8°66.2°
C16N2C17H17A175.4°173.4°
C16N2C18C198.2°0.0°
O2C06C05O345.3°60.0°
O2C06C07O6152.5°174.7°
O2C06C05C0476.7°60.1°
O2C06C05C07116.8°119.9°
O2C06C05H06117.9°120.1°
O2C06C05H05164.0°179.9°
O2C06C07H06122.3°120.0°
O2C06C07C1187.0°65.3°
O2C06C07H0733.6°54.7°
HO2O2C06C05180.0°60.0°
HO2O2C06C0759.9°60.0°
HO2O2C06H0662.3°180.0°
O3C05C04C03161.9°55.0°
O3C05C04C06121.5°120.0°
O3C05C04H05119.0°120.0°
O3C05C04H0475.8°175.0°
O3C05C06H05118.7°120.0°
O3C05C06C0771.4°60.0°
O3C05C06H06163.2°180.0°
HO3O3C05C04180.0°59.9°
HO3O3C05C0657.1°60.1°
HO3O3C05H0561.4°179.9°
O4C11C07O632.4°5.0°
O4C11C07C0682.9°115.0°
O4C11C07H07156.7°125.0°
O5C18C19C2035.1°0.0°
O5C18C19C21105.3°68.7°
O5C18C19H1994.2°145.7°
C22O6C07C06170.0°123.3°
C22O6C07C1172.1°116.8°
C22O6C07H0751.7°3.2°
O6C22H22H22A120.0°120.0°
O6C22H22H22B120.0°120.0°
O6C22H22AH22B120.0°120.0°
O6C07C06C0540.2°54.8°
O6C07C06C11120.5°120.0°
O6C07C06H07119.0°120.0°
O6C07C06H0685.2°65.3°
O6C07C11H07124.3°120.0°
C07O6C22H22180.0°175.7°
C07O6C22H22A60.0°55.7°
C07O6C22H22B60.0°64.3°
C02C01C09C10119.5°120.0°
C02C01C09C08119.3°120.0°
C02C01C10C08117.7°120.0°
C01C02C03H02180.0°179.9°
C01C02C03C04177.1°180.0°
C01C02C03H032.9°0.0°
C02C01C08H08180.0°60.0°
C02C01C08H08A60.0°60.0°
C02C01C08H08B60.0°180.0°
C02C01C09H09180.0°180.0°
C02C01C09H09A60.0°60.0°
C02C01C09H09B60.0°60.0°
C02C01C10H10180.0°179.9°
C02C01C10H10A60.0°60.0°
C02C01C10H10B60.0°60.0°
C09C01C10C08121.4°120.0°
C09C01C02C031.0°119.9°
C09C01C02H02179.0°60.0°
C09C01C08H0857.7°180.0°
C09C01C08H08A177.7°60.1°
C09C01C08H08B62.3°60.0°
C01C09H09H09A120.0°119.9°
C01C09H09H09B120.0°120.1°
C01C09H09AH09B120.0°120.0°
C09C01C10H1059.1°60.0°
C09C01C10H10A60.9°60.0°
C09C01C10H10B179.1°180.0°
C10C01C02C03116.4°0.0°
C10C01C02H0263.6°180.0°
C10C01C08H0860.5°60.0°
C10C01C08H08A59.4°180.0°
C10C01C08H08B179.5°60.0°
C10C01C09H0960.5°60.0°
C10C01C09H09A179.5°180.0°
C10C01C09H09B59.5°60.0°
C01C10H10H10A120.0°120.1°
C01C10H10H10B120.0°120.0°
C01C10H10AH10B120.0°120.0°
C08C01C02C03123.1°120.0°
C08C01C02H0256.9°60.0°
C01C08H08H08A120.0°120.0°
C01C08H08H08B120.0°120.0°
C01C08H08AH08B120.0°120.0°
C08C01C09H0960.7°60.0°
C08C01C09H09A59.3°60.0°
C08C01C09H09B179.3°180.0°
C08C01C10H1062.3°60.0°
C08C01C10H10A177.7°180.0°
C08C01C10H10B57.7°60.0°
C02C03C04H03180.0°180.0°
C02C03C04C05109.6°125.0°
C02C03C04H0412.3°115.0°
H02C02C03C042.9°0.0°
H02C02C03H03177.1°180.0°
C03C04C05H04122.3°120.0°
C03C04C05C0676.6°175.0°
C03C04C05H0542.9°65.0°
H03C03C04C0570.4°55.0°
H03C03C04H04167.7°65.0°
C04C05C06H05119.3°120.0°
C04C05C06C07166.6°180.0°
C04C05C06H0641.2°59.9°
H04C04C05C0645.6°65.0°
H04C04C05H05165.1°55.0°
C05C06C07H06125.3°120.0°
C05C06C07C11160.7°174.8°
C05C06C07H0778.8°65.2°
H05C05C06C0747.2°60.0°
H05C05C06H0678.1°60.0°
C06C07C11H07120.4°120.0°
H06C06C07C1135.3°54.7°
H06C06C07H07155.8°174.7°
H08C08H08AH08B120.0°120.0°
H09C09H09AH09B120.0°120.0°
H10C10H10AH10B120.0°119.9°
C13C12H12H12A118.9°120.0°
C12C13C14C17115.3°119.9°
C12C13C14H13120.0°120.1°
C12C13C17H13122.6°120.0°
C12C13C14C15166.6°178.7°
C12C13C14H1446.4°61.2°
C12C13C14H14A73.2°58.7°
C12C13C17H1753.0°54.8°
C12C13C17H17A67.7°65.6°
H12C12C13C14163.5°175.0°
H12C12C13C1745.2°55.2°
H12C12C13H1377.0°64.9°
H12AC12C13C1444.2°54.9°
H12AC12C13C1774.1°64.9°
H12AC12C13H13163.8°175.1°
C14C13C17H13124.9°120.0°
C13C14C15H14120.2°120.1°
C13C14C15H14A120.1°120.0°
C13C14H14H14A119.4°120.0°
C13C14C15C1645.6°61.4°
C13C14C15H15166.2°178.6°
C13C14C15H15A75.0°58.5°
C14C13C17H1759.6°65.1°
C14C13C17H17A179.7°174.4°
C17C13C14C1551.3°61.4°
C17C13C14H1468.8°58.7°
C17C13C14H14A171.5°178.6°
C13C17H17H17A121.0°120.4°
H13C13C14C1573.5°58.6°
H13C13C14H14166.4°178.6°
H13C13C14H14A46.7°61.4°
H13C13C17H17175.6°174.8°
H13C13C17H17A54.8°54.4°
C15C14H14H14A119.5°119.9°
C14C15C16H15120.6°120.0°
C14C15C16H15A120.6°120.0°
C14C15H15H15A118.2°120.1°
C14C15C16H16169.4°174.4°
C14C15C16H16A70.9°65.2°
H14C14C15C1674.5°58.7°
H14C14C15H1546.1°61.3°
H14C14C15H15A164.9°178.6°
H14AC14C15C16165.8°178.6°
H14AC14C15H1573.6°58.6°
H14AC14C15H15A45.2°61.5°
C16C15H15H15A118.1°120.0°
C15C16H16H16A119.5°120.3°
H15C15C16H1669.9°65.6°
H15C15C16H16A49.7°54.8°
H15AC15C16H1648.8°54.4°
H15AC15C16H16A168.5°174.8°
C18C19C20C21126.0°107.5°
C18C19C20H19129.5°145.0°
C18C19C21H19160.4°145.0°
C18C19C20H2017.1°0.0°
C18C19C20H20A125.1°145.0°
C18C19C21H21152.7°145.0°
C18C19C21H21A13.2°0.1°
C20C19C21H19102.5°107.5°
C19C20C21H20108.9°107.5°
C19C20C21H20A108.9°107.5°
C19C20H20H20A145.9°145.7°
C19C20C21H21110.3°107.5°
C19C20C21H21A110.2°107.5°
C19C21H21H21A143.1°145.7°
H19C19C20H20146.6°145.0°
H19C19C20H20A4.3°0.0°
H19C19C21H217.7°0.1°
H19C19C21H21A147.2°145.0°
C21C20H20H20A145.9°145.7°
C20C21H21H21A143.1°145.7°
H20C20C21H21140.9°145.0°
H20C20C21H21A1.4°0.0°
H20AC20C21H211.4°0.1°
H20AC20C21H21A140.9°145.0°
H22C22H22AH22B120.0°120.0°

221051

PDB entries from 2024-06-12

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