XXX
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O3A | C4A | sing | 1.43Å | 1.45Å | |
O3A | HO3A | sing | 0.97Å | 0.95Å | |
C4A | C5A | sing | 1.53Å | 1.58Å | |
C4A | C9 | sing | 1.53Å | 1.58Å | |
C4A | H4A | sing | 1.09Å | 1.11Å | |
C5A | O4A | sing | 1.43Å | 1.43Å | |
C5A | C6A | sing | 1.53Å | 1.51Å | |
C5A | H5A | sing | 1.09Å | 1.11Å | |
O4A | HO4A | sing | 0.97Å | 0.95Å | |
C6A | N1 | sing | 1.47Å | 1.50Å | |
C6A | C7 | sing | 1.53Å | 1.55Å | |
C6A | H6 | sing | 1.09Å | 1.12Å | |
N1 | HN11 | sing | 1.01Å | 1.02Å | |
N1 | HN12 | sing | 1.01Å | 1.02Å | |
C7 | C8 | sing | 1.53Å | 1.56Å | |
C7 | H71 | sing | 1.09Å | 1.12Å | |
C7 | H72 | sing | 1.09Å | 1.11Å | |
C8 | N2 | sing | 1.47Å | 1.52Å | |
C8 | C9 | sing | 1.53Å | 1.50Å | |
C8 | H8 | sing | 1.09Å | 1.12Å | |
N2 | HN21 | sing | 1.01Å | 1.02Å | |
N2 | HN22 | sing | 1.01Å | 1.02Å | |
C9 | O1 | sing | 1.43Å | 1.37Å | |
C9 | H9 | sing | 1.09Å | 1.11Å | |
O1 | C1 | sing | 1.43Å | 1.39Å | |
C1 | O5 | sing | 1.43Å | 1.53Å | |
C1 | C2 | sing | 1.53Å | 1.55Å | |
C1 | H1 | sing | 1.09Å | 1.11Å | |
O5 | C5 | sing | 1.43Å | 1.50Å | |
C5 | C6 | sing | 1.53Å | 1.54Å | |
C5 | C4 | sing | 1.53Å | 1.50Å | |
C5 | H5 | sing | 1.09Å | 1.12Å | |
C6 | N3 | sing | 1.47Å | 1.49Å | |
C6 | H61 | sing | 1.09Å | 1.11Å | |
C6 | H62 | sing | 1.09Å | 1.11Å | |
N3 | HN31 | sing | 1.01Å | 1.02Å | |
N3 | HN32 | sing | 1.01Å | 1.02Å | |
C4 | O4 | sing | 1.43Å | 1.39Å | |
C4 | C3 | sing | 1.53Å | 1.50Å | |
C4 | H4 | sing | 1.09Å | 1.11Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C3 | O3 | sing | 1.43Å | 1.43Å | |
C3 | C2 | sing | 1.53Å | 1.49Å | |
C3 | H3 | sing | 1.09Å | 1.11Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C2 | N4 | sing | 1.47Å | 1.51Å | |
C2 | H2 | sing | 1.09Å | 1.12Å | |
N4 | HN41 | sing | 1.01Å | 1.02Å | |
N4 | HN42 | sing | 1.01Å | 1.02Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C4A | O3A | HO3A | 109.4° | 106.8° |
O3A | C4A | C5A | 109.4° | 109.5° |
O3A | C4A | C9 | 110.1° | 109.5° |
O3A | C4A | H4A | 108.9° | 109.5° |
C5A | C4A | C9 | 108.8° | 109.4° |
C5A | C4A | H4A | 110.2° | 109.5° |
C4A | C5A | O4A | 111.6° | 109.4° |
C4A | C5A | C6A | 110.6° | 109.5° |
C4A | C5A | H5A | 106.7° | 109.5° |
C9 | C4A | H4A | 109.5° | 109.4° |
C4A | C9 | C8 | 105.2° | 109.5° |
C4A | C9 | O1 | 107.0° | 109.5° |
C4A | C9 | H9 | 114.3° | 109.4° |
O4A | C5A | C6A | 107.9° | 109.5° |
O4A | C5A | H5A | 109.5° | 109.5° |
C5A | O4A | HO4A | 111.6° | 106.8° |
C6A | C5A | H5A | 110.6° | 109.4° |
C5A | C6A | N1 | 109.7° | 109.5° |
C5A | C6A | C7 | 109.2° | 109.5° |
C5A | C6A | H6 | 109.9° | 109.5° |
N1 | C6A | C7 | 110.7° | 109.5° |
N1 | C6A | H6 | 108.4° | 109.4° |
C6A | N1 | HN11 | 112.1° | 106.7° |
C6A | N1 | HN12 | 109.7° | 106.7° |
C7 | C6A | H6 | 109.0° | 109.5° |
C6A | C7 | C8 | 108.1° | 109.5° |
C6A | C7 | H71 | 112.7° | 109.5° |
C6A | C7 | H72 | 112.7° | 109.5° |
HN11 | N1 | HN12 | 112.1° | 106.7° |
C8 | C7 | H71 | 112.7° | 109.4° |
C8 | C7 | H72 | 112.7° | 109.4° |
C7 | C8 | N2 | 105.5° | 109.5° |
C7 | C8 | C9 | 110.7° | 109.5° |
C7 | C8 | H8 | 110.5° | 109.4° |
H71 | C7 | H72 | 97.8° | 109.5° |
N2 | C8 | C9 | 107.0° | 109.5° |
N2 | C8 | H8 | 114.0° | 109.5° |
C8 | N2 | HN21 | 113.7° | 106.7° |
C8 | N2 | HN22 | 105.5° | 106.7° |
C9 | C8 | H8 | 109.1° | 109.5° |
C8 | C9 | O1 | 110.9° | 109.5° |
C8 | C9 | H9 | 110.6° | 109.4° |
HN21 | N2 | HN22 | 113.7° | 106.7° |
O1 | C9 | H9 | 108.9° | 109.5° |
C9 | O1 | C1 | 121.0° | 106.8° |
O1 | C1 | O5 | 104.1° | 109.4° |
O1 | C1 | C2 | 114.1° | 109.4° |
O1 | C1 | H1 | 108.9° | 109.4° |
O5 | C1 | C2 | 105.9° | 109.8° |
O5 | C1 | H1 | 116.8° | 109.4° |
C1 | O5 | C5 | 113.1° | 107.6° |
C2 | C1 | H1 | 107.3° | 109.4° |
C1 | C2 | C3 | 112.3° | 109.0° |
C1 | C2 | N4 | 108.9° | 109.5° |
C1 | C2 | H2 | 107.9° | 109.5° |
O5 | C5 | C6 | 110.6° | 109.4° |
O5 | C5 | C4 | 108.7° | 109.7° |
O5 | C5 | H5 | 109.1° | 109.4° |
C6 | C5 | C4 | 108.9° | 109.4° |
C6 | C5 | H5 | 108.8° | 109.5° |
C5 | C6 | N3 | 110.6° | 109.5° |
C5 | C6 | H61 | 111.8° | 109.5° |
C5 | C6 | H62 | 111.8° | 109.5° |
C4 | C5 | H5 | 110.7° | 109.4° |
C5 | C4 | O4 | 108.6° | 109.5° |
C5 | C4 | C3 | 111.5° | 109.1° |
C5 | C4 | H4 | 108.7° | 109.7° |
N3 | C6 | H61 | 111.8° | 109.5° |
N3 | C6 | H62 | 111.8° | 109.4° |
C6 | N3 | HN31 | 111.8° | 106.7° |
C6 | N3 | HN32 | 110.6° | 106.7° |
H61 | C6 | H62 | 98.6° | 109.4° |
HN31 | N3 | HN32 | 111.8° | 106.7° |
O4 | C4 | C3 | 109.3° | 109.5° |
O4 | C4 | H4 | 110.8° | 109.5° |
C4 | O4 | HO4 | 108.6° | 106.8° |
C3 | C4 | H4 | 107.9° | 109.6° |
C4 | C3 | O3 | 110.3° | 109.8° |
C4 | C3 | C2 | 108.9° | 108.6° |
C4 | C3 | H3 | 109.2° | 109.7° |
O3 | C3 | C2 | 109.1° | 109.6° |
O3 | C3 | H3 | 109.0° | 109.6° |
C3 | O3 | HO3 | 110.3° | 106.8° |
C2 | C3 | H3 | 110.3° | 109.6° |
C3 | C2 | N4 | 109.4° | 109.6° |
C3 | C2 | H2 | 107.4° | 109.6° |
N4 | C2 | H2 | 110.9° | 109.6° |
C2 | N4 | HN41 | 112.4° | 106.7° |
C2 | N4 | HN42 | 108.9° | 106.7° |
HN41 | N4 | HN42 | 112.4° | 106.7° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O3A | C4A | C5A | C9 | 120.3° | 120.0° |
O3A | C4A | C5A | H4A | 119.7° | 120.1° |
O3A | C4A | C9 | H4A | 119.7° | 120.0° |
O3A | C4A | C5A | O4A | 59.3° | 60.1° |
O3A | C4A | C5A | C6A | 179.4° | 180.0° |
O3A | C4A | C5A | H5A | 60.3° | 60.0° |
O3A | C4A | C9 | C8 | 178.4° | 180.0° |
O3A | C4A | C9 | O1 | 60.4° | 60.0° |
O3A | C4A | C9 | H9 | 60.2° | 60.0° |
HO3A | O3A | C4A | C5A | 180.0° | 60.0° |
HO3A | O3A | C4A | C9 | 60.5° | 180.0° |
HO3A | O3A | C4A | H4A | 59.5° | 60.0° |
C5A | C4A | C9 | H4A | 120.5° | 120.0° |
C4A | C5A | O4A | C6A | 121.7° | 120.0° |
C4A | C5A | O4A | H5A | 117.9° | 120.0° |
C4A | C5A | C6A | H5A | 118.0° | 120.1° |
C4A | C5A | O4A | HO4A | 180.0° | 60.1° |
C4A | C5A | C6A | N1 | 179.8° | 180.0° |
C4A | C5A | C6A | C7 | 58.4° | 60.0° |
C4A | C5A | C6A | H6 | 61.1° | 60.0° |
C5A | C4A | C9 | C8 | 61.8° | 60.0° |
C5A | C4A | C9 | O1 | 179.8° | 180.0° |
C5A | C4A | C9 | H9 | 59.6° | 60.0° |
C9 | C4A | C5A | O4A | 179.6° | 180.0° |
C9 | C4A | C5A | C6A | 60.3° | 60.0° |
C9 | C4A | C5A | H5A | 60.0° | 60.0° |
C4A | C9 | C8 | C7 | 65.3° | 60.0° |
C4A | C9 | C8 | N2 | 179.8° | 180.0° |
C4A | C9 | C8 | O1 | 115.3° | 120.0° |
C4A | C9 | C8 | H9 | 123.8° | 120.0° |
C4A | C9 | C8 | H8 | 56.4° | 60.0° |
C4A | C9 | O1 | H9 | 123.9° | 120.0° |
C4A | C9 | O1 | C1 | 68.6° | 91.7° |
H4A | C4A | C5A | O4A | 60.3° | 60.0° |
H4A | C4A | C5A | C6A | 59.7° | 60.0° |
H4A | C4A | C5A | H5A | 179.9° | 180.0° |
H4A | C4A | C9 | C8 | 58.7° | 60.0° |
H4A | C4A | C9 | O1 | 59.3° | 60.0° |
H4A | C4A | C9 | H9 | 179.9° | 180.0° |
O4A | C5A | C6A | H5A | 119.7° | 120.0° |
O4A | C5A | C6A | N1 | 57.9° | 60.0° |
O4A | C5A | C6A | C7 | 179.3° | 180.0° |
O4A | C5A | C6A | H6 | 61.2° | 60.0° |
C6A | C5A | O4A | HO4A | 58.3° | 180.0° |
C5A | C6A | N1 | C7 | 120.5° | 120.0° |
C5A | C6A | N1 | H6 | 120.0° | 120.0° |
C5A | C6A | C7 | H6 | 120.1° | 120.0° |
C5A | C6A | N1 | HN11 | 54.7° | 180.0° |
C5A | C6A | N1 | HN12 | 180.0° | 66.2° |
C5A | C6A | C7 | C8 | 59.0° | 60.0° |
C5A | C6A | C7 | H71 | 175.7° | 180.0° |
C5A | C6A | C7 | H72 | 66.2° | 60.0° |
H5A | C5A | O4A | HO4A | 62.1° | 60.0° |
H5A | C5A | C6A | N1 | 61.8° | 60.0° |
H5A | C5A | C6A | C7 | 59.6° | 60.0° |
H5A | C5A | C6A | H6 | 179.1° | 180.0° |
N1 | C6A | C7 | H6 | 119.1° | 120.0° |
C6A | N1 | HN11 | HN12 | 123.9° | 113.8° |
N1 | C6A | C7 | C8 | 179.8° | 180.0° |
N1 | C6A | C7 | H71 | 54.9° | 60.0° |
N1 | C6A | C7 | H72 | 54.6° | 60.0° |
C7 | C6A | N1 | HN11 | 175.2° | 60.0° |
C7 | C6A | N1 | HN12 | 59.5° | 53.8° |
C6A | C7 | C8 | H71 | 125.2° | 120.0° |
C6A | C7 | C8 | H72 | 125.3° | 120.0° |
C6A | C7 | H71 | H72 | 118.7° | 120.0° |
C6A | C7 | C8 | N2 | 179.6° | 180.0° |
C6A | C7 | C8 | C9 | 65.0° | 60.0° |
C6A | C7 | C8 | H8 | 55.9° | 60.0° |
H6 | C6A | N1 | HN11 | 65.3° | 60.0° |
H6 | C6A | N1 | HN12 | 60.0° | 173.8° |
H6 | C6A | C7 | C8 | 61.1° | 60.0° |
H6 | C6A | C7 | H71 | 64.2° | 60.0° |
H6 | C6A | C7 | H72 | 173.7° | 180.0° |
C8 | C7 | H71 | H72 | 118.6° | 119.9° |
C7 | C8 | N2 | C9 | 117.9° | 120.0° |
C7 | C8 | N2 | H8 | 121.4° | 120.0° |
C7 | C8 | C9 | H8 | 121.8° | 120.0° |
C7 | C8 | N2 | HN21 | 54.8° | 52.8° |
C7 | C8 | N2 | HN22 | 180.0° | 166.6° |
C7 | C8 | C9 | O1 | 179.3° | 180.0° |
C7 | C8 | C9 | H9 | 58.5° | 60.0° |
H71 | C7 | C8 | N2 | 54.3° | 60.0° |
H71 | C7 | C8 | C9 | 169.7° | 180.0° |
H71 | C7 | C8 | H8 | 69.3° | 60.0° |
H72 | C7 | C8 | N2 | 55.2° | 60.0° |
H72 | C7 | C8 | C9 | 60.3° | 60.0° |
H72 | C7 | C8 | H8 | 178.8° | 180.0° |
N2 | C8 | C9 | H8 | 123.7° | 120.0° |
C8 | N2 | HN21 | HN22 | 120.8° | 113.8° |
N2 | C8 | C9 | O1 | 64.8° | 60.0° |
N2 | C8 | C9 | H9 | 56.0° | 60.1° |
C9 | C8 | N2 | HN21 | 172.7° | 172.9° |
C9 | C8 | N2 | HN22 | 62.1° | 73.3° |
C8 | C9 | O1 | H9 | 121.9° | 120.0° |
C8 | C9 | O1 | C1 | 177.2° | 148.3° |
H8 | C8 | N2 | HN21 | 66.7° | 67.1° |
H8 | C8 | N2 | HN22 | 58.6° | 46.7° |
H8 | C8 | C9 | O1 | 58.9° | 60.0° |
H8 | C8 | C9 | H9 | 179.8° | 180.0° |
C9 | O1 | C1 | O5 | 95.1° | 74.7° |
C9 | O1 | C1 | C2 | 149.9° | 164.9° |
C9 | O1 | C1 | H1 | 30.1° | 45.2° |
H9 | C9 | O1 | C1 | 55.3° | 28.3° |
O1 | C1 | O5 | C2 | 120.6° | 120.0° |
O1 | C1 | O5 | H1 | 120.1° | 119.9° |
O1 | C1 | C2 | H1 | 120.7° | 119.8° |
O1 | C1 | O5 | C5 | 63.4° | 52.5° |
O1 | C1 | C2 | C3 | 56.8° | 58.8° |
O1 | C1 | C2 | N4 | 64.6° | 61.1° |
O1 | C1 | C2 | H2 | 175.0° | 178.7° |
O5 | C1 | C2 | H1 | 125.4° | 120.1° |
C1 | O5 | C5 | C6 | 178.9° | 172.3° |
C1 | O5 | C5 | C4 | 59.3° | 67.6° |
C1 | O5 | C5 | H5 | 61.5° | 52.4° |
O5 | C1 | C2 | C3 | 57.1° | 61.3° |
O5 | C1 | C2 | N4 | 178.4° | 178.8° |
O5 | C1 | C2 | H2 | 61.1° | 58.6° |
C2 | C1 | O5 | C5 | 57.1° | 67.6° |
C1 | C2 | C3 | C4 | 59.3° | 53.7° |
C1 | C2 | C3 | O3 | 179.7° | 173.6° |
C1 | C2 | C3 | N4 | 121.1° | 119.9° |
C1 | C2 | C3 | H2 | 118.5° | 119.8° |
C1 | C2 | C3 | H3 | 60.5° | 66.1° |
C1 | C2 | N4 | H2 | 118.6° | 120.2° |
C1 | C2 | N4 | HN41 | 54.7° | 60.0° |
C1 | C2 | N4 | HN42 | 180.0° | 173.8° |
H1 | C1 | O5 | C5 | 176.5° | 172.3° |
H1 | C1 | C2 | C3 | 177.5° | 178.6° |
H1 | C1 | C2 | N4 | 56.2° | 58.7° |
H1 | C1 | C2 | H2 | 64.3° | 61.5° |
O5 | C5 | C6 | C4 | 119.4° | 120.3° |
O5 | C5 | C6 | H5 | 119.8° | 119.8° |
O5 | C5 | C4 | H5 | 119.8° | 120.0° |
O5 | C5 | C6 | N3 | 60.3° | 64.8° |
O5 | C5 | C6 | H61 | 65.0° | 55.2° |
O5 | C5 | C6 | H62 | 174.5° | 175.2° |
O5 | C5 | C4 | O4 | 179.4° | 178.8° |
O5 | C5 | C4 | C3 | 58.9° | 61.3° |
O5 | C5 | C4 | H4 | 59.9° | 58.6° |
C6 | C5 | C4 | H5 | 119.6° | 119.9° |
C5 | C6 | N3 | H61 | 125.3° | 120.0° |
C5 | C6 | N3 | H62 | 125.2° | 120.0° |
C5 | C6 | H61 | H62 | 117.7° | 120.0° |
C5 | C6 | N3 | HN31 | 54.7° | 66.3° |
C5 | C6 | N3 | HN32 | 180.0° | 180.0° |
C6 | C5 | C4 | O4 | 60.0° | 58.7° |
C6 | C5 | C4 | C3 | 179.5° | 178.6° |
C6 | C5 | C4 | H4 | 60.6° | 61.5° |
C4 | C5 | C6 | N3 | 179.7° | 174.9° |
C4 | C5 | C6 | H61 | 54.4° | 65.1° |
C4 | C5 | C6 | H62 | 55.0° | 54.9° |
C5 | C4 | O4 | C3 | 121.8° | 119.6° |
C5 | C4 | O4 | H4 | 119.3° | 120.3° |
C5 | C4 | C3 | H4 | 119.3° | 120.0° |
C5 | C4 | O4 | HO4 | 180.0° | 179.5° |
C5 | C4 | C3 | O3 | 179.2° | 173.7° |
C5 | C4 | C3 | C2 | 59.5° | 53.8° |
C5 | C4 | C3 | H3 | 61.1° | 65.9° |
H5 | C5 | C6 | N3 | 59.5° | 55.0° |
H5 | C5 | C6 | H61 | 175.3° | 175.0° |
H5 | C5 | C6 | H62 | 65.8° | 65.0° |
H5 | C5 | C4 | O4 | 59.6° | 61.2° |
H5 | C5 | C4 | C3 | 60.9° | 58.6° |
H5 | C5 | C4 | H4 | 179.7° | 178.6° |
N3 | C6 | H61 | H62 | 117.7° | 120.0° |
C6 | N3 | HN31 | HN32 | 124.6° | 113.7° |
H61 | C6 | N3 | HN31 | 180.0° | 173.7° |
H61 | C6 | N3 | HN32 | 54.7° | 60.0° |
H62 | C6 | N3 | HN31 | 70.5° | 53.8° |
H62 | C6 | N3 | HN32 | 54.8° | 60.0° |
O4 | C4 | C3 | H4 | 120.6° | 120.1° |
O4 | C4 | C3 | O3 | 60.7° | 66.5° |
O4 | C4 | C3 | C2 | 179.5° | 173.7° |
O4 | C4 | C3 | H3 | 59.0° | 53.9° |
C3 | C4 | O4 | HO4 | 58.2° | 60.0° |
C4 | C3 | O3 | C2 | 119.6° | 119.2° |
C4 | C3 | O3 | H3 | 119.9° | 120.5° |
C4 | C3 | C2 | H3 | 119.9° | 119.8° |
C4 | C3 | O3 | HO3 | 180.0° | 60.8° |
C4 | C3 | C2 | N4 | 179.6° | 173.6° |
C4 | C3 | C2 | H2 | 59.2° | 66.1° |
H4 | C4 | O4 | HO4 | 60.7° | 60.2° |
H4 | C4 | C3 | O3 | 59.9° | 53.6° |
H4 | C4 | C3 | C2 | 59.8° | 66.2° |
H4 | C4 | C3 | H3 | 179.6° | 174.0° |
O3 | C3 | C2 | H3 | 119.7° | 120.3° |
O3 | C3 | C2 | N4 | 59.2° | 66.5° |
O3 | C3 | C2 | H2 | 61.3° | 53.8° |
C2 | C3 | O3 | HO3 | 60.4° | 180.0° |
C3 | C2 | N4 | H2 | 118.3° | 120.3° |
C3 | C2 | N4 | HN41 | 177.8° | 179.6° |
C3 | C2 | N4 | HN42 | 56.9° | 66.6° |
H3 | C3 | O3 | HO3 | 60.2° | 59.7° |
H3 | C3 | C2 | N4 | 60.5° | 53.8° |
H3 | C3 | C2 | H2 | 179.0° | 174.1° |
C2 | N4 | HN41 | HN42 | 123.4° | 113.8° |
H2 | C2 | N4 | HN41 | 63.9° | 60.1° |
H2 | C2 | N4 | HN42 | 61.4° | 53.6° |