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XXB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1doub1.22Å1.22Å
C1C2sing1.47Å1.51Å
C1O2sing1.35Å1.31Å
N1C2sing1.37Å1.36ÅAromatic
N1N2sing1.28Å1.40ÅAromatic
N1C5sing1.47Å1.48Å
C2C3doub1.38Å1.41ÅAromatic
N2C4doub1.31Å1.35ÅAromatic
C3C4sing1.40Å1.38ÅAromatic
C5C6sing1.53Å1.52Å
C6C7sing1.53Å1.52Å
C7C8sing1.53Å1.52Å
O2HO2sing0.97Å0.95Å
C3H3sing1.08Å1.08Å
C4H4sing1.08Å1.08Å
C5H5sing1.09Å1.10Å
C5H5Asing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C8H8Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2134.6°120.0°
O1C1O2117.0°120.0°
C2C1O299.3°120.0°
C1C2N1128.6°126.9°
C1C2C3126.0°126.9°
C1O2HO2109.5°117.0°
C2N1N2111.0°109.6°
C2N1C5134.3°125.2°
N1C2C3105.1°106.2°
N2N1C5114.7°125.2°
N1N2C4106.2°110.9°
N1C5C6109.7°109.5°
N1C5H5109.4°109.5°
N1C5H5A109.4°109.4°
C2C3C4108.3°105.3°
C2C3H3125.9°127.4°
N2C4C3109.4°107.9°
N2C4H4125.3°126.1°
C4C3H3125.8°127.3°
C3C4H4125.3°126.0°
C5C6C7114.1°109.4°
C6C5H5109.4°109.5°
C6C5H5A109.4°109.5°
C5C6H6107.9°109.5°
C5C6H6A107.9°109.5°
C6C7C8109.8°109.4°
C7C6H6108.0°109.5°
C7C6H6A108.0°109.5°
C6C7H7109.4°109.5°
C6C7H7A109.4°109.5°
C8C7H7109.3°109.5°
C8C7H7A109.3°109.4°
C7C8H8109.5°109.5°
C7C8H8A109.5°109.4°
C7C8H8B109.5°109.4°
H5C5H5A109.6°109.4°
H6C6H6A110.9°109.5°
H7C7H7A109.6°109.5°
H8C8H8A109.5°109.5°
H8C8H8B109.5°109.5°
H8AC8H8B109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2O2143.8°179.6°
O1C1C2N127.4°180.0°
O1C1C2C3145.1°0.1°
O1C1O2HO20.0°0.1°
C1C2N1C3173.8°179.9°
C1C2N1N2175.3°179.9°
C1C2N1C55.1°0.3°
C1C2C3C4175.9°179.9°
C2C1O2HO2151.8°179.7°
C1C2C3H34.1°0.1°
O2C1C2N1171.2°0.3°
O2C1C2C31.3°179.8°
C2N1N2C5179.7°179.8°
C2N1N2C40.5°0.0°
N1C2C3C41.9°0.0°
C2N1C5C695.0°90.0°
N1C2C3H3178.1°180.0°
C2N1C5H525.0°150.0°
C2N1C5H5A145.1°30.0°
N2N1C2C31.5°0.0°
N1N2C4C30.8°0.0°
N2N1C5C684.7°90.3°
N1N2C4H4179.2°179.9°
N2N1C5H5155.3°29.8°
N2N1C5H5A35.3°149.7°
C5N1C2C3178.9°179.8°
C5N1N2C4179.8°179.8°
N1C5C6H5120.0°120.1°
N1C5C6H5A120.0°119.9°
N1C5C6C7116.1°180.0°
N1C5H5H5A119.9°119.9°
N1C5C6H6123.9°60.0°
N1C5C6H6A3.9°60.0°
C2C3C4N21.7°0.0°
C2C3C4H3180.0°180.0°
C2C3C4H4178.3°179.9°
N2C4C3H4180.0°179.9°
N2C4C3H3178.3°180.0°
C5C6C7H6120.0°120.0°
C5C6C7H6A120.0°120.0°
C5C6C7C8111.2°180.0°
C6C5H5H5A119.9°120.0°
C5C6H6H6A118.1°120.0°
C5C6C7H78.8°60.0°
C5C6C7H7A128.8°60.1°
C6C7C8H7120.0°120.0°
C6C7C8H7A120.0°119.9°
C7C6C5H53.9°60.0°
C7C6C5H5A124.0°60.0°
C7C6H6H6A118.1°120.0°
C6C7H7H7A119.9°120.0°
C6C7C8H8180.0°60.0°
C6C7C8H8A60.0°60.1°
C6C7C8H8B60.0°179.9°
C8C7C6H6128.8°60.0°
C8C7C6H6A8.8°60.0°
C8C7H7H7A119.8°120.0°
C7C8H8H8A120.0°120.0°
C7C8H8H8B120.0°120.0°
C7C8H8AH8B120.0°119.9°
H3C3C4H41.7°0.1°
H5C5C6H6116.1°179.9°
H5C5C6H6A123.9°60.1°
H5AC5C6H63.9°59.9°
H5AC5C6H6A116.1°179.9°
H6C6C7H7111.2°180.0°
H6C6C7H7A8.8°59.9°
H6AC6C7H7128.8°60.0°
H6AC6C7H7A111.2°179.9°
H7C7C8H860.0°NaN°
H7C7C8H8A180.0°60.0°
H7C7C8H8B60.0°59.9°
H7AC7C8H860.0°60.0°
H7AC7C8H8A60.0°180.0°
H7AC7C8H8B180.0°60.1°
H8C8H8AH8B120.0°120.1°

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PDB entries from 2026-01-21

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