XX1
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.24Å | |
C | CA | sing | 1.51Å | 1.52Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
CA | N | sing | 1.47Å | 1.47Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CB | CG | sing | 1.53Å | 1.54Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | CD | sing | 1.53Å | 1.53Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CG | HG3 | sing | 1.09Å | 1.10Å | |
CD | CE | sing | 1.53Å | 1.53Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
CD | HD3 | sing | 1.09Å | 1.10Å | |
CE | NZ | sing | 1.46Å | 1.46Å | |
CE | HE2 | sing | 1.09Å | 1.10Å | |
CE | HE3 | sing | 1.09Å | 1.10Å | |
NZ | C6 | sing | 1.39Å | 1.38Å | |
NZ | HZ | sing | 0.97Å | 1.00Å | |
C6 | N1 | doub | 1.33Å | 1.36Å | Aromatic |
C6 | C5 | sing | 1.40Å | 1.40Å | Aromatic |
C5 | C4 | doub | 1.40Å | 1.39Å | Aromatic |
C5 | N7 | sing | 1.38Å | 1.35Å | Aromatic |
N7 | C8 | sing | 1.35Å | 1.36Å | Aromatic |
N7 | HN7 | sing | 0.97Å | 1.00Å | |
C8 | N9 | doub | 1.30Å | 1.35Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.08Å | |
N1 | C2 | sing | 1.32Å | 1.35Å | Aromatic |
C2 | N3 | doub | 1.31Å | 1.34Å | Aromatic |
C2 | HC2 | sing | 1.08Å | 1.08Å | |
N3 | C4 | sing | 1.34Å | 1.35Å | Aromatic |
C4 | N9 | sing | 1.35Å | 1.34Å | Aromatic |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 120.6° | 120.0° |
O | C | OXT | 122.9° | 120.0° |
CA | C | OXT | 116.4° | 120.0° |
C | CA | N | 110.8° | 109.5° |
C | CA | CB | 112.7° | 109.5° |
C | CA | HA | 107.8° | 109.5° |
C | OXT | HXT | 109.5° | 116.9° |
N | CA | CB | 113.5° | 109.5° |
N | CA | HA | 106.9° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.4° | 111.0° |
CB | CA | HA | 104.7° | 109.4° |
CA | CB | CG | 119.4° | 109.5° |
CA | CB | HB2 | 106.3° | 109.4° |
CA | CB | HB3 | 104.0° | 109.5° |
H | N | H2 | 109.4° | 111.0° |
CG | CB | HB2 | 106.3° | 109.5° |
CG | CB | HB3 | 104.0° | 109.5° |
CB | CG | CD | 110.4° | 109.4° |
CB | CG | HG2 | 109.2° | 109.4° |
CB | CG | HG3 | 109.0° | 109.5° |
HB2 | CB | HB3 | 117.6° | 109.5° |
CD | CG | HG2 | 109.1° | 109.5° |
CD | CG | HG3 | 108.9° | 109.5° |
CG | CD | CE | 116.4° | 109.5° |
CG | CD | HD2 | 107.2° | 109.5° |
CG | CD | HD3 | 105.6° | 109.5° |
HG2 | CG | HG3 | 110.2° | 109.5° |
CE | CD | HD2 | 107.2° | 109.4° |
CE | CD | HD3 | 105.6° | 109.5° |
CD | CE | NZ | 106.4° | 109.5° |
CD | CE | HE2 | 110.5° | 109.5° |
CD | CE | HE3 | 111.2° | 109.5° |
HD2 | CD | HD3 | 115.1° | 109.5° |
NZ | CE | HE2 | 110.5° | 109.5° |
NZ | CE | HE3 | 111.1° | 109.5° |
CE | NZ | C6 | 128.3° | 120.0° |
CE | NZ | HZ | 103.6° | 120.0° |
HE2 | CE | HE3 | 107.2° | 109.4° |
C6 | NZ | HZ | 103.6° | 120.0° |
NZ | C6 | N1 | 116.8° | 120.7° |
NZ | C6 | C5 | 126.5° | 120.7° |
N1 | C6 | C5 | 116.7° | 118.5° |
C6 | N1 | C2 | 123.0° | 121.1° |
C6 | C5 | C4 | 118.2° | 118.6° |
C6 | C5 | N7 | 136.7° | 135.3° |
C4 | C5 | N7 | 105.1° | 106.1° |
C5 | C4 | N3 | 122.9° | 118.6° |
C5 | C4 | N9 | 110.7° | 106.8° |
C5 | N7 | C8 | 108.9° | 107.2° |
C5 | N7 | HN7 | 125.6° | 126.4° |
C8 | N7 | HN7 | 125.6° | 126.4° |
N7 | C8 | N9 | 109.4° | 110.1° |
N7 | C8 | H8 | 125.3° | 125.0° |
N9 | C8 | H8 | 125.3° | 124.9° |
C8 | N9 | C4 | 105.9° | 109.8° |
N1 | C2 | N3 | 121.1° | 122.6° |
N1 | C2 | HC2 | 119.4° | 118.8° |
N3 | C2 | HC2 | 119.4° | 118.7° |
C2 | N3 | C4 | 117.9° | 120.5° |
N3 | C4 | N9 | 126.4° | 134.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 178.5° | 179.7° |
O | C | CA | N | 167.5° | 20.0° |
O | C | CA | CB | 39.1° | 100.0° |
O | C | CA | HA | 75.9° | 140.1° |
O | C | OXT | HXT | 0.0° | 0.0° |
C | CA | N | CB | 127.9° | 120.0° |
C | CA | N | HA | 117.2° | 120.0° |
C | CA | CB | HA | 116.9° | 120.0° |
C | CA | N | H | 81.1° | 60.0° |
C | CA | N | H2 | 38.8° | 176.0° |
C | CA | CB | CG | 47.3° | 175.0° |
C | CA | CB | HB2 | 72.7° | 65.0° |
C | CA | CB | HB3 | 162.6° | 55.0° |
CA | C | OXT | HXT | 178.4° | 179.7° |
OXT | C | CA | N | 14.1° | 160.3° |
OXT | C | CA | CB | 142.4° | 79.7° |
OXT | C | CA | HA | 102.5° | 40.2° |
N | CA | CB | HA | 116.2° | 120.0° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | CG | 79.6° | 65.0° |
N | CA | CB | HB2 | 160.4° | 55.0° |
N | CA | CB | HB3 | 35.6° | 175.0° |
CB | CA | N | H | 151.0° | 60.0° |
CB | CA | N | H2 | 89.0° | 63.9° |
CA | CB | CG | HB2 | 120.0° | 119.9° |
CA | CB | CG | HB3 | 115.2° | 120.0° |
CA | CB | HB2 | HB3 | 115.9° | 120.0° |
CA | CB | CG | CD | 162.5° | 180.0° |
CA | CB | CG | HG2 | 42.5° | 60.0° |
CA | CB | CG | HG3 | 77.9° | 60.0° |
HA | CA | N | H | 36.1° | 180.0° |
HA | CA | N | H2 | 156.0° | 56.0° |
HA | CA | CB | CG | 164.2° | 55.0° |
HA | CA | CB | HB2 | 44.2° | 175.0° |
HA | CA | CB | HB3 | 80.6° | 65.0° |
CG | CB | HB2 | HB3 | 116.0° | 120.0° |
CB | CG | CD | HG2 | 120.0° | 120.0° |
CB | CG | CD | HG3 | 119.6° | 120.0° |
CB | CG | HG2 | HG3 | 119.6° | 120.0° |
CB | CG | CD | CE | 148.5° | 180.0° |
CB | CG | CD | HD2 | 28.5° | 60.0° |
CB | CG | CD | HD3 | 94.7° | 60.0° |
HB2 | CB | CG | CD | 77.5° | 60.1° |
HB2 | CB | CG | HG2 | 162.5° | 180.0° |
HB2 | CB | CG | HG3 | 42.1° | 59.9° |
HB3 | CB | CG | CD | 47.3° | 60.0° |
HB3 | CB | CG | HG2 | 72.7° | 60.0° |
HB3 | CB | CG | HG3 | 166.9° | 180.0° |
CD | CG | HG2 | HG3 | 119.6° | 120.0° |
CG | CD | CE | HD2 | 120.0° | 120.0° |
CG | CD | CE | HD3 | 116.8° | 120.0° |
CG | CD | HD2 | HD3 | 117.1° | 120.0° |
CG | CD | CE | NZ | 94.4° | 180.0° |
CG | CD | CE | HE2 | 25.6° | 60.0° |
CG | CD | CE | HE3 | 144.4° | 60.0° |
HG2 | CG | CD | CE | 91.5° | 60.0° |
HG2 | CG | CD | HD2 | 148.5° | 180.0° |
HG2 | CG | CD | HD3 | 25.3° | 60.0° |
HG3 | CG | CD | CE | 28.9° | 60.0° |
HG3 | CG | CD | HD2 | 91.1° | 59.9° |
HG3 | CG | CD | HD3 | 145.7° | 180.0° |
CE | CD | HD2 | HD3 | 117.1° | 120.0° |
CD | CE | NZ | HE2 | 120.0° | 120.1° |
CD | CE | NZ | HE3 | 121.2° | 120.0° |
CD | CE | HE2 | HE3 | 121.2° | 120.0° |
CD | CE | NZ | C6 | 148.2° | 180.0° |
CD | CE | NZ | HZ | 28.2° | 0.0° |
HD2 | CD | CE | NZ | 145.6° | 60.0° |
HD2 | CD | CE | HE2 | 94.4° | 180.0° |
HD2 | CD | CE | HE3 | 24.4° | 60.0° |
HD3 | CD | CE | NZ | 22.4° | 60.0° |
HD3 | CD | CE | HE2 | 142.4° | 60.0° |
HD3 | CD | CE | HE3 | 98.7° | 180.0° |
NZ | CE | HE2 | HE3 | 121.2° | 120.0° |
CE | NZ | C6 | HZ | 120.0° | 180.0° |
CE | NZ | C6 | N1 | 179.3° | 0.0° |
CE | NZ | C6 | C5 | 0.7° | 179.7° |
HE2 | CE | NZ | C6 | 91.8° | 59.9° |
HE2 | CE | NZ | HZ | 148.2° | 120.1° |
HE3 | CE | NZ | C6 | 27.0° | 60.0° |
HE3 | CE | NZ | HZ | 93.0° | 120.0° |
NZ | C6 | N1 | C5 | 180.0° | 179.7° |
NZ | C6 | C5 | C4 | 179.8° | 180.0° |
NZ | C6 | C5 | N7 | 0.2° | 0.0° |
NZ | C6 | N1 | C2 | 179.9° | 180.0° |
HZ | NZ | C6 | N1 | 60.7° | 180.0° |
HZ | NZ | C6 | C5 | 119.3° | 0.3° |
N1 | C6 | C5 | C4 | 0.3° | 0.3° |
N1 | C6 | C5 | N7 | 179.8° | 179.7° |
C6 | N1 | C2 | N3 | 0.2° | 0.0° |
C6 | N1 | C2 | HC2 | 179.8° | 180.0° |
C6 | C5 | C4 | N7 | 180.0° | 180.0° |
C6 | C5 | N7 | C8 | 179.9° | 180.0° |
C6 | C5 | N7 | HN7 | 0.1° | 0.0° |
C5 | C6 | N1 | C2 | 0.1° | 0.3° |
C6 | C5 | C4 | N3 | 0.2° | 0.0° |
C6 | C5 | C4 | N9 | 179.7° | 180.0° |
C4 | C5 | N7 | C8 | 0.1° | 0.0° |
C4 | C5 | N7 | HN7 | 179.8° | 179.9° |
C5 | C4 | N9 | C8 | 0.4° | 0.0° |
C5 | C4 | N3 | C2 | 0.0° | 0.2° |
C5 | C4 | N3 | N9 | 179.4° | 179.9° |
C5 | N7 | C8 | HN7 | 180.0° | 180.0° |
C5 | N7 | C8 | N9 | 0.1° | 0.0° |
C5 | N7 | C8 | H8 | 179.9° | 180.0° |
N7 | C5 | C4 | N3 | 179.8° | 180.0° |
N7 | C5 | C4 | N9 | 0.3° | 0.0° |
N7 | C8 | N9 | H8 | 180.0° | 180.0° |
N7 | C8 | N9 | C4 | 0.3° | 0.0° |
HN7 | N7 | C8 | N9 | 179.9° | 179.9° |
HN7 | N7 | C8 | H8 | 0.1° | 0.0° |
C8 | N9 | C4 | N3 | 179.9° | 179.9° |
H8 | C8 | N9 | C4 | 179.7° | 180.0° |
N1 | C2 | N3 | HC2 | 180.0° | 179.9° |
N1 | C2 | N3 | C4 | 0.2° | 0.2° |
C2 | N3 | C4 | N9 | 179.4° | 179.8° |
HC2 | C2 | N3 | C4 | 179.8° | 179.8° |