Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

XVO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C21N19sing1.47Å1.47Å
C20N19sing1.47Å1.47Å
N19C18sing1.47Å1.47Å
C18C17sing1.53Å1.52Å
C17C14sing1.51Å1.51Å
C14C15doub1.38Å1.40ÅAromatic
C14C13sing1.38Å1.39ÅAromatic
C15C16sing1.38Å1.39ÅAromatic
C07C06sing1.51Å1.51Å
C07C08sing1.53Å1.53Å
N02C02sing1.39Å1.36Å
C13C12doub1.38Å1.39ÅAromatic
N01C06doub1.32Å1.34ÅAromatic
N01C02sing1.32Å1.35ÅAromatic
C16C08sing1.51Å1.51Å
C16C11doub1.38Å1.39ÅAromatic
C06C05sing1.38Å1.39ÅAromatic
C02C03doub1.39Å1.39ÅAromatic
C12C11sing1.39Å1.38ÅAromatic
C12F12sing1.35Å1.35Å
C11F11sing1.35Å1.35Å
C05C04doub1.39Å1.39ÅAromatic
C03C04sing1.38Å1.40ÅAromatic
C03H1sing1.08Å1.08Å
C04H2sing1.08Å1.08Å
C05H3sing1.08Å1.08Å
C07H4sing1.09Å1.10Å
C07H5sing1.09Å1.10Å
C08H6sing1.09Å1.10Å
C08H7sing1.09Å1.10Å
C13H8sing1.08Å1.08Å
C15H9sing1.08Å1.08Å
C17H10sing1.09Å1.10Å
C17H11sing1.09Å1.10Å
C18H12sing1.09Å1.10Å
C18H13sing1.09Å1.10Å
C20H14sing1.09Å1.10Å
C20H15sing1.09Å1.10Å
C20H16sing1.09Å1.10Å
C21H17sing1.09Å1.10Å
C21H18sing1.09Å1.10Å
C21H19sing1.09Å1.10Å
N02H20sing0.97Å1.00Å
N02H21sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C21N19C20110.4°111.0°
C21N19C18109.6°111.0°
N19C21H17109.5°109.5°
N19C21H18109.5°109.5°
N19C21H19109.5°109.5°
C20N19C18108.7°111.0°
N19C20H14109.5°109.5°
N19C20H15109.4°109.5°
N19C20H16109.5°109.5°
N19C18C17109.3°109.5°
N19C18H12109.5°109.5°
N19C18H13109.5°109.5°
C18C17C14106.3°109.5°
C18C17H10110.3°109.4°
C18C17H11110.3°109.5°
C17C18H12109.5°109.5°
C17C18H13109.5°109.5°
C17C14C15120.9°119.9°
C17C14C13118.4°120.0°
C14C17H10110.3°109.5°
C14C17H11110.3°109.5°
C15C14C13120.7°120.1°
C14C15C16118.9°120.0°
C14C15H9120.6°120.0°
C14C13C12120.0°120.0°
C14C13H8120.0°120.0°
C15C16C08124.0°120.0°
C15C16C11119.9°120.0°
C16C15H9120.6°120.0°
C06C07C0896.0°109.4°
C07C06N01118.2°119.6°
C07C06C05122.1°119.6°
C06C07H4112.7°109.5°
C06C07H5112.7°109.5°
C07C08C16120.8°109.5°
C08C07H4112.7°109.4°
C08C07H5112.7°109.4°
C07C08H6106.6°109.5°
C07C08H7106.6°109.5°
N02C02N01119.1°119.8°
N02C02C03121.0°119.7°
C02N02H20109.5°120.1°
C02N02H21109.5°120.0°
C13C12C11119.4°119.9°
C13C12F12120.7°120.0°
C12C13H8120.0°120.0°
C06N01C02122.6°121.6°
N01C06C05119.4°120.8°
N01C02C03119.9°120.6°
C08C16C11116.0°120.0°
C16C08H6106.6°109.5°
C16C08H7106.6°109.4°
C16C11C12121.1°119.9°
C16C11F11119.9°120.1°
C06C05C04119.6°119.3°
C06C05H3120.2°120.3°
C02C03C04119.0°119.1°
C02C03H1120.5°120.4°
C11C12F12119.9°120.0°
C12C11F11119.0°120.0°
C05C04C03119.4°118.5°
C05C04H2120.3°120.8°
C04C05H3120.2°120.3°
C04C03H1120.5°120.5°
C03C04H2120.3°120.7°
H4C07H5109.5°109.6°
H6C08H7109.5°109.5°
H10C17H11109.5°109.5°
H12C18H13109.5°109.5°
H14C20H15109.5°109.4°
H14C20H16109.5°109.5°
H15C20H16109.5°109.5°
H17C21H18109.4°109.4°
H17C21H19109.5°109.5°
H18C21H19109.5°109.5°
H20N02H21109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C21N19C20C18120.2°124.0°
C21N19C18C17147.2°170.0°
C21N19C18H1227.2°70.0°
C21N19C18H1392.9°50.0°
C21N19C20H14180.0°60.0°
C21N19C20H1560.0°180.0°
C21N19C20H1660.0°60.0°
N19C21H17H18120.0°120.0°
N19C21H17H19120.0°120.1°
N19C21H18H19120.0°120.1°
C20N19C18C1792.1°66.0°
C20N19C18H12147.9°54.0°
C20N19C18H1327.9°173.9°
N19C20H14H15120.0°120.0°
N19C20H14H16120.0°120.0°
N19C20H15H16120.0°120.0°
C20N19C21H17180.0°64.0°
C20N19C21H1860.0°176.1°
C20N19C21H1960.0°56.1°
N19C18C17H12120.0°120.0°
N19C18C17H13120.0°120.0°
N19C18C17C14144.9°180.0°
N19C18C17H1095.6°60.0°
N19C18C17H1125.4°60.0°
N19C18H12H13120.1°120.0°
C18N19C20H1459.8°176.0°
C18N19C20H1560.2°56.1°
C18N19C20H16179.8°64.0°
C18N19C21H1760.3°59.9°
C18N19C21H18179.7°60.0°
C18N19C21H1959.7°180.0°
C18C17C14H10119.5°120.0°
C18C17C14H11119.5°120.0°
C18C17C14C15125.4°90.0°
C18C17C14C1353.3°89.8°
C18C17H10H11121.5°120.0°
C17C18H12H13120.1°120.0°
C17C14C15C13178.7°179.8°
C17C14C15C16179.1°180.0°
C17C14C13C12179.3°179.7°
C17C14C13H80.7°0.2°
C17C14C15H90.9°0.3°
C14C17H10H11121.5°120.0°
C14C17C18H1224.9°60.0°
C14C17C18H1395.2°60.0°
C14C15C16H9180.0°179.7°
C15C14C13C120.6°0.1°
C14C15C16C08179.7°180.0°
C14C15C16C110.1°0.5°
C15C14C13H8179.4°180.0°
C15C14C17H10115.1°150.0°
C15C14C17H115.9°30.0°
C13C14C15C160.4°0.2°
C14C13C12H8180.0°179.9°
C14C13C12C110.4°0.1°
C14C13C12F12179.3°180.0°
C13C14C15H9179.6°180.0°
C13C14C17H1066.2°30.2°
C13C14C17H11172.9°150.2°
C15C16C08C072.2°100.0°
C15C16C08C11179.8°179.5°
C15C16C11C120.1°0.5°
C15C16C11F11179.9°179.7°
C15C16C08H6123.8°20.0°
C15C16C08H7119.4°140.0°
C06C07C08H4117.7°120.0°
C06C07C08H5117.7°120.0°
C07C06N01C05174.5°180.0°
C07C06N01C02177.5°180.0°
C06C07C08C16170.5°180.0°
C07C06C05C04176.7°180.0°
C07C06C05H33.3°0.1°
C06C07H4H5126.4°120.1°
C06C07C08H667.9°60.0°
C06C07C08H749.0°60.0°
C08C07C06N0178.0°55.0°
C07C08C16H6121.6°120.0°
C07C08C16H7121.6°120.0°
C07C08C16C11177.6°80.5°
C08C07C06C0596.3°125.0°
C08C07H4H5126.3°120.0°
C07C08H6H7114.9°120.1°
N02C02N01C06178.4°179.7°
N02C02N01C03179.9°179.7°
N02C02C03C04179.7°179.7°
N02C02C03H10.3°0.3°
C02N02H20H21120.0°180.0°
C13C12C11C160.1°0.2°
C13C12C11F12179.7°179.9°
C13C12C11F11179.9°180.0°
C06N01C02C031.6°0.0°
N01C06C05C042.4°0.0°
N01C06C05H3177.6°180.0°
N01C06C07H439.7°65.0°
N01C06C07H5164.3°174.9°
C02N01C06C053.0°0.0°
N01C02C03C040.2°0.0°
N01C02C03H1179.7°180.0°
N01C02N02H200.0°179.7°
N01C02N02H21120.0°0.3°
C08C16C11C12179.9°180.0°
C08C16C11F110.1°0.2°
C16C08C07H452.8°60.1°
C16C08C07H571.7°60.0°
C16C08H6H7114.9°120.0°
C08C16C15H90.3°0.3°
C16C11C12F11180.0°179.8°
C16C11C12F12179.6°179.7°
C11C16C08H656.1°159.5°
C11C16C08H760.8°39.5°
C11C16C15H9179.9°179.7°
C06C05C04H3180.0°180.0°
C06C05C04C030.7°0.0°
C06C05C04H2179.4°179.9°
C05C06C07H4145.9°115.1°
C05C06C07H521.3°5.1°
C02C03C04C050.7°0.0°
C02C03C04H1180.0°180.0°
C02C03C04H2179.3°179.9°
C03C02N02H20179.9°0.0°
C03C02N02H2159.9°180.0°
C11C12C13H8179.6°180.0°
F12C12C11F110.4°0.1°
F12C12C13H80.7°0.1°
C05C04C03H2180.0°179.9°
C05C04C03H1179.3°180.0°
C03C04C05H3179.4°179.9°
H1C03C04H20.7°0.1°
H2C04C05H30.6°0.0°
H4C07C08H6174.4°180.0°
H4C07C08H768.8°59.9°
H5C07C08H649.8°60.0°
H5C07C08H7166.7°180.0°
H10C17C18H12144.4°180.0°
H10C17C18H1324.3°60.0°
H11C17C18H1294.6°60.0°
H11C17C18H13145.3°180.0°
H14C20H15H16120.0°120.0°
H17C21H18H19120.0°119.9°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon