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XSP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2PPdoub1.48Å1.53Å
O4PPsing1.61Å1.53Å
PO1Psing1.61Å1.61Å
PO3Psing1.61Å1.50Å
O1PC2sing1.43Å1.51Å
C3C2sing1.51Å1.52Å
C3O3doub1.21Å1.41Å
C2C1sing1.51Å1.52Å
O1C1doub1.21Å1.28Å
C1O2sing1.34Å1.26Å
C2H1sing1.09Å1.10Å
C3H2sing1.08Å1.08Å
O2H4sing0.97Å0.95Å
O3PH6sing0.97Å0.95Å
O4PH7sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2PPO4P112.5°109.4°
O2PPO1P104.3°109.5°
O2PPO3P110.7°109.5°
O4PPO1P109.6°109.5°
O4PPO3P112.0°109.5°
PO4PH7109.5°114.0°
O1PPO3P107.3°109.5°
PO1PC2112.8°123.0°
PO3PH6109.5°114.0°
O1PC2C3111.5°109.5°
O1PC2C1119.8°109.4°
O1PC2H1100.5°109.5°
C2C3O3121.7°120.0°
C3C2C1118.9°109.5°
C3C2H1100.4°109.5°
C2C3H2119.1°120.0°
O3C3H2119.1°120.0°
C2C1O1117.4°120.0°
C2C1O2121.6°120.0°
C1C2H1100.4°109.4°
O1C1O2120.7°120.0°
C1O2H4109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2PPO4PO1P115.6°120.0°
O2PPO4PO3P125.4°120.0°
O2PPO1PO3P117.5°120.0°
O2PPO1PC2174.7°55.0°
O2PPO3PH60.0°180.0°
O2PPO4PH70.0°60.1°
O4PPO1PO3P121.9°120.0°
O4PPO1PC264.7°175.0°
O4PPO3PH6126.4°60.0°
PO1PC2C3114.6°120.0°
PO1PC2C199.7°120.0°
PO1PC2H18.8°0.0°
O1PPO3PH6113.2°60.0°
O1PPO4PH7115.6°179.9°
O3PPO1PC257.2°65.0°
O3PPO4PH7125.4°59.9°
O1PC2C3C1146.0°120.0°
O1PC2C3H1105.8°120.1°
O1PC2C3O383.3°0.1°
O1PC2C1H1108.6°120.0°
O1PC2C1O120.6°5.3°
O1PC2C1O2165.8°175.1°
O1PC2C3H296.7°180.0°
C2C3O3H2180.0°179.9°
C3C2C1H1108.2°120.0°
C3C2C1O1163.8°114.7°
C3C2C1O222.6°65.0°
O3C3C2C162.8°120.1°
O3C3C2H1170.9°120.0°
C2C1O1O2173.7°179.6°
C1C2C3H2117.2°60.0°
C2C1O2H4173.4°180.0°
O1C1C2H188.1°125.3°
O1C1O2H40.0°0.3°
O2C1C2H185.6°55.1°
H1C2C3H29.1°59.9°

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PDB entries from 2024-08-14

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