XRE
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CB | CA | sing | 1.54Å | 1.52Å | |
CB | CG | sing | 1.55Å | 1.52Å | |
C | CA | sing | 1.51Å | 1.53Å | |
C | O | doub | 1.21Å | 1.27Å | |
CA | N | sing | 1.48Å | 1.48Å | |
CG | CD | sing | 1.55Å | 1.47Å | |
N | CD | sing | 1.49Å | 1.45Å | |
CD | OD | sing | 1.43Å | 1.41Å | |
C | OXT | sing | 1.34Å | 1.36Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CG | HG3 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
OD | H9 | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | CB | CG | 100.1° | 105.2° |
CB | CA | C | 116.8° | 109.9° |
CB | CA | N | 102.1° | 107.0° |
CA | CB | HB2 | 111.7° | 110.3° |
CA | CB | HB3 | 111.8° | 110.3° |
CB | CA | HA | 110.5° | 109.9° |
CB | CG | CD | 101.5° | 102.9° |
CG | CB | HB2 | 111.8° | 110.3° |
CG | CB | HB3 | 111.7° | 110.3° |
CB | CG | HG2 | 111.4° | 110.7° |
CB | CG | HG3 | 111.4° | 110.7° |
CA | C | O | 125.2° | 120.0° |
C | CA | N | 105.8° | 109.9° |
CA | C | OXT | 111.4° | 120.0° |
C | CA | HA | 110.3° | 110.1° |
O | C | OXT | 123.3° | 120.0° |
CA | N | CD | 108.6° | 105.8° |
CA | N | H | 109.7° | 111.0° |
N | CA | HA | 111.0° | 109.9° |
CG | CD | N | 105.6° | 103.2° |
CG | CD | OD | 105.9° | 110.6° |
CD | CG | HG2 | 111.4° | 110.8° |
CD | CG | HG3 | 111.4° | 110.7° |
CG | CD | HD2 | 110.1° | 110.7° |
N | CD | OD | 113.3° | 110.6° |
N | CD | HD2 | 110.6° | 110.8° |
CD | N | H | 109.7° | 111.0° |
OD | CD | HD2 | 111.1° | 110.7° |
CD | OD | H9 | 109.5° | 114.0° |
C | OXT | HXT | 109.5° | 117.0° |
HB2 | CB | HB3 | 109.5° | 110.3° |
HG2 | CG | HG3 | 109.5° | 110.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | CB | CG | HB2 | 118.4° | 118.9° |
CA | CB | CG | HB3 | 118.5° | 118.9° |
CB | CA | C | N | 112.7° | 117.6° |
CB | CA | C | HA | 127.3° | 121.2° |
CB | CA | C | O | 115.1° | 100.0° |
CB | CA | N | HA | 117.7° | 119.3° |
CA | CB | CG | CD | 46.3° | 22.0° |
CB | CA | N | CD | 20.0° | 25.3° |
CB | CA | C | OXT | 66.9° | 80.0° |
CA | CB | HB2 | HB3 | 124.4° | 122.1° |
CA | CB | CG | HG2 | 72.5° | 96.4° |
CA | CB | CG | HG3 | 165.0° | 140.3° |
CB | CA | N | H | 99.9° | 145.8° |
CG | CB | CA | C | 74.5° | 120.5° |
CG | CB | CA | N | 40.2° | 1.2° |
CB | CG | CD | HG2 | 118.7° | 118.4° |
CB | CG | CD | HG3 | 118.7° | 118.3° |
CB | CG | CD | N | 34.7° | 37.4° |
CB | CG | CD | OD | 155.1° | 155.8° |
CG | CB | HB2 | HB3 | 124.4° | 122.1° |
CB | CG | HG2 | HG3 | 123.7° | 123.2° |
CB | CG | CD | HD2 | 84.7° | 81.2° |
CG | CB | CA | HA | 158.3° | 118.1° |
CA | C | O | OXT | 177.8° | 179.9° |
C | CA | N | HA | 119.6° | 121.3° |
C | CA | N | CD | 102.6° | 144.7° |
C | CA | CB | HB2 | 43.9° | 120.5° |
C | CA | CB | HB3 | 167.0° | 1.6° |
C | CA | N | H | 137.5° | 94.9° |
CA | C | OXT | HXT | 178.0° | 180.0° |
O | C | CA | N | 2.4° | 17.5° |
O | C | CA | HA | 117.7° | 138.8° |
O | C | OXT | HXT | 0.0° | 0.1° |
CA | N | CD | CG | 9.2° | 39.2° |
CA | N | CD | H | 119.9° | 120.4° |
CA | N | CD | OD | 124.7° | 157.6° |
N | CA | C | OXT | 179.6° | 162.4° |
N | CA | CB | HB2 | 158.7° | 120.2° |
N | CA | CB | HB3 | 78.2° | 117.7° |
CA | N | CD | HD2 | 109.9° | 79.2° |
CG | CD | N | OD | 115.4° | 118.4° |
CG | CD | N | HD2 | 119.1° | 118.5° |
CG | CD | OD | HD2 | 119.5° | 123.0° |
CD | CG | CB | HB2 | 164.7° | 97.0° |
CD | CG | CB | HB3 | 72.2° | 140.9° |
CD | CG | HG2 | HG3 | 123.7° | 123.3° |
CG | CD | N | H | 129.1° | 159.7° |
CG | CD | OD | H9 | 180.0° | 180.0° |
N | CD | OD | HD2 | 125.2° | 123.2° |
N | CD | CG | HG2 | 84.0° | 80.9° |
N | CD | CG | HG3 | 153.4° | 155.8° |
CD | N | CA | HA | 137.8° | 94.0° |
N | CD | OD | H9 | 64.7° | 66.3° |
OD | CD | CG | HG2 | 36.4° | 37.5° |
OD | CD | CG | HG3 | 86.1° | 85.8° |
OD | CD | N | H | 115.4° | 81.9° |
OXT | C | CA | HA | 60.3° | 41.2° |
HB2 | CB | CG | HG2 | 46.0° | 144.7° |
HB2 | CB | CG | HG3 | 76.6° | 21.4° |
HB2 | CB | CA | HA | 83.3° | 0.9° |
HB3 | CB | CG | HG2 | 169.1° | 22.5° |
HB3 | CB | CG | HG3 | 46.5° | 100.7° |
HB3 | CB | CA | HA | 39.9° | 123.0° |
HG2 | CG | CD | HD2 | 156.6° | 160.5° |
HG3 | CG | CD | HD2 | 34.0° | 37.2° |
HD2 | CD | N | H | 10.0° | 41.2° |
HD2 | CD | OD | H9 | 60.4° | 56.9° |
H | N | CA | HA | 17.9° | 26.5° |