Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

XRA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.34Å1.35ÅAromatic
N1C6sing1.32Å1.36ÅAromatic
O1C8sing1.36Å1.37Å
O1C12sing1.43Å1.43Å
C2C3sing1.42Å1.48ÅAromatic
C2C7sing1.40Å1.38ÅAromatic
N2C4sing1.33Å1.36ÅAromatic
N2C6doub1.33Å1.36ÅAromatic
O2C9sing1.36Å1.38Å
O2C14sing1.43Å1.43Å
C3C4doub1.42Å1.48ÅAromatic
C3C10sing1.40Å1.40ÅAromatic
N3C4sing1.38Å1.35Å
O3C22doub1.22Å1.22Å
N4C6sing1.38Å1.40Å
N4C17sing1.47Å1.46Å
N4C21sing1.47Å1.46Å
O4C23sing1.35Å1.37ÅAromatic
O4C25sing1.34Å1.48ÅAromatic
N5C18sing1.47Å1.46Å
N5C20sing1.47Å1.47Å
N5C22sing1.35Å1.34Å
C7C8doub1.38Å1.39ÅAromatic
C8C9sing1.40Å1.50ÅAromatic
C9C10doub1.37Å1.40ÅAromatic
C17C18sing1.53Å1.52Å
C20C21sing1.53Å1.53Å
C22C23sing1.47Å1.49Å
C23C27doub1.37Å1.39ÅAromatic
C25C26doub1.35Å1.38ÅAromatic
C26C27sing1.40Å1.38ÅAromatic
N3HN3sing0.97Å1.00Å
N3HN3Asing0.97Å1.00Å
C7H7sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C12H12Bsing1.09Å1.10Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C14H14Bsing1.09Å1.10Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
C18H18sing1.09Å1.10Å
C18H18Asing1.09Å1.10Å
C20H20sing1.09Å1.10Å
C20H20Asing1.09Å1.10Å
C21H21sing1.09Å1.10Å
C21H21Asing1.09Å1.10Å
C25H25sing1.08Å1.08Å
C26H26sing1.08Å1.08Å
C27H27sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6121.2°120.4°
N1C2C3119.7°118.8°
N1C2C7120.7°121.7°
N1C6N2122.1°122.7°
N1C6N4117.9°118.6°
C8O1C12119.1°117.0°
O1C8C7118.2°119.7°
O1C8C9120.9°119.6°
O1C12H12109.5°109.5°
O1C12H12A109.5°109.5°
O1C12H12B109.5°109.4°
C3C2C7119.6°119.4°
C2C3C4116.0°118.3°
C2C3C10121.0°119.9°
C2C7C8120.1°119.6°
C2C7H7120.0°120.3°
C4N2C6122.4°121.4°
N2C4C3118.6°118.4°
N2C4N3121.0°120.8°
N2C6N4120.0°118.6°
C9O2C14125.2°117.0°
O2C9C8118.7°119.6°
O2C9C10122.5°119.6°
O2C14H14109.5°109.4°
O2C14H14A109.5°109.5°
O2C14H14B109.4°109.5°
C4C3C10123.0°121.8°
C3C4N3120.4°120.8°
C3C10C9119.6°119.7°
C3C10H10120.2°120.1°
C4N3HN3109.5°120.0°
C4N3HN3A109.4°120.0°
O3C22N5121.4°120.0°
O3C22C23117.5°120.0°
C6N4C17119.3°111.0°
C6N4C21121.0°111.0°
C17N4C21119.8°111.3°
N4C17C18103.5°109.3°
N4C17H17111.5°109.5°
N4C17H17A111.5°109.5°
N4C21C20106.1°109.4°
N4C21H21110.6°109.6°
N4C21H21A110.6°109.5°
C23O4C25104.3°109.4°
O4C23C22116.0°126.0°
O4C23C27111.6°108.0°
O4C25C26107.6°108.8°
O4C25H25126.2°125.6°
C18N5C20117.0°118.3°
C18N5C22120.5°120.9°
N5C18C17105.7°108.5°
N5C18H18110.7°109.6°
N5C18H18A110.7°109.6°
C20N5C22122.5°120.8°
N5C20C21109.7°108.5°
N5C20H20109.4°109.7°
N5C20H20A109.4°109.6°
N5C22C23121.1°120.0°
C7C8C9121.0°120.7°
C8C7H7120.0°120.2°
C8C9C10118.8°120.8°
C9C10H10120.2°120.2°
C18C17H17111.5°109.5°
C18C17H17A111.5°109.5°
C17C18H18110.7°109.7°
C17C18H18A110.7°109.6°
C21C20H20109.4°109.7°
C21C20H20A109.4°109.6°
C20C21H21110.6°109.5°
C20C21H21A110.6°109.4°
C22C23C27132.4°126.0°
C23C27C26107.7°106.7°
C23C27H27126.1°126.6°
C25C26C27108.8°107.1°
C26C25H25126.2°125.6°
C25C26H26125.6°126.4°
C27C26H26125.6°126.5°
C26C27H27126.1°126.7°
HN3N3HN3A109.5°120.0°
H12C12H12A109.5°109.5°
H12C12H12B109.4°109.6°
H12AC12H12B109.5°109.4°
H14C14H14A109.4°109.5°
H14C14H14B109.5°109.4°
H14AC14H14B109.5°109.5°
H17C17H17A107.4°109.5°
H18C18H18A108.2°109.8°
H20C20H20A109.5°109.8°
H21C21H21A108.3°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2C3C7179.8°180.0°
C2N1C6N20.2°0.0°
N1C2C3C40.2°0.0°
N1C2C3C10179.5°180.0°
C2N1C6N4179.8°180.0°
N1C2C7C8179.7°180.0°
N1C2C7H70.3°0.0°
C6N1C2C30.2°0.0°
C6N1C2C7180.0°180.0°
N1C6N2C40.7°0.1°
N1C6N2N4179.6°180.0°
N1C6N4C1758.0°180.0°
N1C6N4C21121.0°55.7°
O1C8C7C2179.7°180.0°
O1C8C9O20.1°0.0°
O1C8C7C9179.9°180.0°
O1C8C9C10179.4°180.0°
O1C8C7H70.3°0.0°
C8O1C12H12180.0°179.9°
C8O1C12H12A60.0°59.9°
C8O1C12H12B60.0°60.0°
C12O1C8C745.1°0.0°
C12O1C8C9134.8°179.9°
O1C12H12H12A120.0°120.0°
O1C12H12H12B120.0°120.0°
O1C12H12AH12B120.0°119.9°
C2C3C4N20.2°0.0°
C2C3C4C10179.7°179.9°
C2C3C4N3179.8°180.0°
C3C2C7C80.1°0.0°
C2C3C10C90.5°0.0°
C3C2C7H7179.9°180.0°
C2C3C10H10179.5°180.0°
C7C2C3C4180.0°180.0°
C7C2C3C100.2°0.0°
C2C7C8H7180.0°180.0°
C2C7C8C90.2°0.0°
N2C4C3N3179.6°179.9°
N2C4C3C10179.9°179.9°
C4N2C6N4179.8°179.9°
N2C4N3HN30.0°0.1°
N2C4N3HN3A120.0°180.0°
C6N2C4C30.6°0.1°
C6N2C4N3179.8°180.0°
N2C6N4C17121.6°0.0°
N2C6N4C2159.4°124.3°
O2C9C10C3179.9°180.0°
O2C9C8C7180.0°180.0°
O2C9C8C10179.5°180.0°
O2C9C10H100.2°0.0°
C9O2C14H14180.0°60.0°
C9O2C14H14A60.0°179.9°
C9O2C14H14B60.0°60.0°
C14O2C9C8174.1°180.0°
C14O2C9C106.4°0.0°
O2C14H14H14A120.0°120.0°
O2C14H14H14B120.0°120.0°
O2C14H14AH14B120.0°120.1°
C4C3C10C9179.8°180.0°
C3C4N3HN3179.6°180.0°
C3C4N3HN3A59.6°0.0°
C4C3C10H100.2°0.1°
C10C3C4N30.4°0.0°
C3C10C9C80.6°0.0°
C3C10C9H10180.0°180.0°
C4N3HN3HN3A120.0°179.9°
O3C22C23O4113.0°172.5°
O3C22N5C185.1°6.9°
O3C22N5C20175.2°173.0°
O3C22N5C23179.5°179.9°
O3C22C23C2766.8°7.5°
C6N4C17C21179.1°124.2°
C6N4C17C18131.0°172.7°
C6N4C21C20166.8°172.8°
C6N4C17H1711.0°67.3°
C6N4C17H17A109.1°52.8°
C6N4C21H2146.8°52.8°
C6N4C21H21A73.2°67.4°
N4C17C18N568.9°53.8°
N4C17C18H17120.0°119.9°
N4C17C18H17A120.0°119.9°
C17N4C21C2014.2°63.1°
N4C17H17H17A122.4°120.1°
N4C17C18H18171.1°65.8°
N4C17C18H18A51.1°173.5°
C17N4C21H21134.2°176.9°
C17N4C21H21A105.8°56.8°
N4C21C20N557.1°53.8°
C21N4C17C1848.1°63.1°
N4C21C20H21120.0°120.0°
N4C21C20H21A120.0°120.0°
C21N4C17H17168.1°56.8°
C21N4C17H17A71.9°176.9°
N4C21C20H20177.2°173.5°
N4C21C20H20A62.9°65.9°
N4C21H21H21A121.4°120.2°
O4C23C22N567.5°7.4°
O4C23C22C27179.8°180.0°
C23O4C25C260.2°0.0°
O4C23C27C260.2°0.0°
C23O4C25H25179.9°180.0°
O4C23C27H27179.8°179.9°
C25O4C23C22180.0°180.0°
C25O4C23C270.2°0.0°
O4C25C26H25180.0°180.0°
O4C25C26C270.0°0.0°
O4C25C26H26180.0°180.0°
C18N5C20C22179.7°179.9°
N5C18C17H18120.0°119.7°
N5C18C17H18A120.0°119.7°
C18N5C20C2135.6°51.1°
C18N5C22C23175.3°173.0°
N5C18C17H17171.1°66.1°
N5C18C17H17A51.1°173.8°
N5C18H18H18A121.5°120.4°
C18N5C20H20155.7°170.9°
C18N5C20H20A84.4°68.5°
C20N5C18C1728.2°51.2°
N5C20C21H20120.0°119.8°
N5C20C21H20A120.0°119.6°
C20N5C22C234.3°7.1°
C20N5C18H18148.2°68.6°
C20N5C18H18A91.8°170.9°
N5C20H20H20A119.9°120.5°
N5C20C21H21177.1°173.8°
N5C20C21H21A62.9°66.2°
C22N5C18C17151.5°128.7°
C22N5C20C21144.7°128.8°
N5C22C23C27112.7°172.6°
C22N5C18H1831.5°111.5°
C22N5C18H18A88.5°9.0°
C22N5C20H2024.6°9.0°
C22N5C20H20A95.3°111.6°
C7C8C9C100.5°0.0°
C9C8C7H7179.8°180.0°
C8C9C10H10179.4°179.9°
C18C17H17H17A122.4°120.1°
C17C18H18H18A121.5°120.5°
C21C20H20H20A119.9°120.5°
C20C21H21H21A121.4°119.9°
C22C23C27C26180.0°180.0°
C22C23C27H270.0°0.1°
C23C27C26C250.1°0.0°
C23C27C26H27180.0°179.9°
C23C27C26H26179.9°180.0°
C25C26C27H26180.0°180.0°
C25C26C27H27179.9°180.0°
C27C26C25H25180.0°180.0°
H12C12H12AH12B120.0°120.1°
H14C14H14AH14B120.0°120.0°
H17C17C18H1851.1°174.2°
H17C17C18H18A68.9°53.6°
H17AC17C18H1868.9°54.1°
H17AC17C18H18A171.1°66.6°
H20C20C21H2162.8°66.4°
H20C20C21H21A57.1°53.6°
H20AC20C21H2157.1°54.1°
H20AC20C21H21A177.1°174.2°
H25C25C26H260.0°0.0°
H26C26C27H270.1°0.0°

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon