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XQA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O7'C7'doub1.21Å1.23Å
C8'C7'sing1.51Å1.51Å
C7'N2'sing1.35Å1.34Å
N2'C2'sing1.46Å1.46Å
O2APAdoub1.48Å1.51Å
C2'C1'sing1.53Å1.52Å
C2'C3'sing1.53Å1.52Å
O3'C3'sing1.43Å1.45Å
O74C74doub1.21Å1.23Å
C1'O5'sing1.43Å1.40Å
C1'O1'sing1.43Å1.41Å
C3'C4'sing1.53Å1.53Å
C4'N4Asing1.46Å1.45Å
C4'C5'sing1.53Å1.58Å
O1APAsing1.61Å1.51Å
PAO3Asing1.61Å1.57Å
PAO5Bsing1.61Å1.60Å
C74N4Asing1.35Å1.37Å
C74C84sing1.51Å1.49Å
O3APBsing1.61Å1.61Å
O5'C5'sing1.43Å1.43Å
O1'PBsing1.61Å1.61Å
C5'C6'sing1.53Å1.54Å
O1BPBdoub1.48Å1.52Å
O5BC5Bsing1.43Å1.42Å
PBO2Bsing1.61Å1.49Å
C5BC4Bsing1.53Å1.53Å
C5C6doub1.35Å1.40Å
C5C4sing1.42Å1.39Å
C6N1sing1.37Å1.36Å
C3BC2Bsing1.55Å1.52Å
C3BO2'sing1.43Å1.42Å
C3BC1Bsing1.55Å1.51Å
C2BC4Bsing1.54Å1.51Å
C2BO3Bsing1.43Å1.44Å
O4C4doub1.22Å1.28Å
C4N3sing1.35Å1.35Å
C4BO4Bsing1.44Å1.42Å
O4BC1Bsing1.44Å1.43Å
N1C1Bsing1.47Å1.45Å
N1C2sing1.35Å1.40Å
N3C2sing1.35Å1.37Å
C2O2doub1.22Å1.26Å
C84H1sing1.09Å1.10Å
C84H2sing1.09Å1.10Å
C84H3sing1.09Å1.10Å
N4AH4sing0.97Å1.00Å
C4'H5sing1.09Å1.10Å
C3'H6sing1.09Å1.10Å
O3'H7sing0.97Å0.95Å
C5'H8sing1.09Å1.10Å
C6'H9sing1.09Å1.10Å
C6'H10sing1.09Å1.10Å
C6'H11sing1.09Å1.10Å
C1'H12sing1.09Å1.10Å
C2'H13sing1.09Å1.10Å
N2'H14sing0.97Å1.00Å
C8'H15sing1.09Å1.10Å
C8'H16sing1.09Å1.10Å
C8'H17sing1.09Å1.10Å
O2BH18sing0.97Å0.95Å
O1AH19sing0.97Å0.95Å
C5BH20sing1.09Å1.10Å
C5BH21sing1.09Å1.10Å
C4BH22sing1.09Å1.10Å
C2BH23sing1.09Å1.10Å
O3BH24sing0.97Å0.95Å
C3BH25sing1.09Å1.10Å
O2'H26sing0.97Å0.95Å
C1BH27sing1.09Å1.10Å
C6H28sing1.08Å1.08Å
C5H29sing1.08Å1.08Å
N3H30sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O7'C7'C8'122.9°120.1°
O7'C7'N2'119.7°120.0°
C8'C7'N2'117.4°120.0°
C7'C8'H15109.5°109.5°
C7'C8'H16109.5°109.5°
C7'C8'H17109.4°109.5°
C7'N2'C2'120.8°120.0°
C7'N2'H14119.6°120.0°
N2'C2'C1'108.5°109.6°
N2'C2'C3'112.2°109.5°
N2'C2'H13108.8°109.6°
C2'N2'H14119.6°120.0°
O2APAO1A112.6°109.5°
O2APAO3A110.3°109.5°
O2APAO5B108.6°109.4°
C1'C2'C3'111.3°109.2°
C2'C1'O5'113.5°109.4°
C2'C1'O1'109.4°109.5°
C2'C1'H12108.3°109.5°
C1'C2'H13108.0°109.6°
C2'C3'O3'109.3°109.7°
C2'C3'C4'105.5°109.0°
C2'C3'H6108.6°109.5°
C3'C2'H13107.9°109.4°
O3'C3'C4'115.1°109.6°
O3'C3'H6109.5°109.5°
C3'O3'H7109.5°114.0°
O74C74N4A129.9°120.0°
O74C74C84117.3°120.0°
O5'C1'O1'106.1°109.5°
C1'O5'C5'114.1°114.1°
O5'C1'H12109.8°109.5°
C1'O1'PB117.6°123.0°
O1'C1'H12109.7°109.5°
C3'C4'N4A112.9°109.5°
C3'C4'C5'107.9°109.2°
C3'C4'H5107.6°109.6°
C4'C3'H6108.6°109.6°
N4AC4'C5'112.5°109.5°
C4'N4AC74129.7°120.0°
C4'N4AH4115.1°120.0°
N4AC4'H5108.6°109.5°
C4'C5'O5'110.2°109.4°
C4'C5'C6'121.3°109.5°
C5'C4'H5107.0°109.5°
C4'C5'H8106.6°109.5°
O1APAO3A107.4°109.5°
O1APAO5B110.3°109.4°
PAO1AH19109.5°114.0°
O3APAO5B107.4°109.5°
PAO3APB130.6°134.0°
PAO5BC5B127.4°123.0°
N4AC74C84112.8°120.0°
C74N4AH4115.2°120.0°
C74C84H1109.5°109.4°
C74C84H2109.4°109.5°
C74C84H3109.4°109.4°
O3APBO1'101.1°109.5°
O3APBO1B101.1°109.4°
O3APBO2B116.4°109.4°
O5'C5'C6'102.6°109.4°
O5'C5'H8108.4°109.5°
O1'PBO1B113.7°109.5°
O1'PBO2B100.0°109.5°
C6'C5'H8107.1°109.5°
C5'C6'H9109.5°109.4°
C5'C6'H10109.5°109.5°
C5'C6'H11109.5°109.5°
O1BPBO2B122.9°109.5°
O5BC5BC4B107.5°109.5°
O5BC5BH20110.0°109.4°
O5BC5BH21110.0°109.5°
PBO2BH18109.5°114.0°
C5BC4BC2B114.6°109.9°
C5BC4BO4B103.7°109.9°
C4BC5BH20110.0°109.5°
C4BC5BH21110.0°109.5°
C5BC4BH22109.2°109.9°
C6C5C4119.8°119.1°
C5C6N1118.3°119.7°
C5C6H28120.9°120.2°
C6C5H29120.1°120.5°
C5C4O4120.6°120.3°
C5C4N3120.8°119.4°
C4C5H29120.1°120.4°
C6N1C1B119.5°119.7°
C6N1C2121.5°120.6°
N1C6H28120.9°120.1°
C2BC3BO2'114.0°110.9°
C2BC3BC1B102.3°102.1°
C3BC2BC4B102.6°104.2°
C3BC2BO3B112.3°110.5°
C3BC2BH23109.1°110.6°
C2BC3BH25108.5°110.9°
O2'C3BC1B113.3°110.9°
O2'C3BH25109.9°110.8°
C3BO2'H26109.5°114.0°
C3BC1BO4B104.4°103.5°
C3BC1BN1112.6°110.6°
C1BC3BH25108.5°110.9°
C3BC1BH27109.2°110.7°
C4BC2BO3B113.3°110.5°
C2BC4BO4B109.1°107.3°
C2BC4BH22109.4°110.0°
C4BC2BH23109.1°110.5°
O3BC2BH23110.2°110.4°
C2BO3BH24109.5°114.0°
O4C4N3118.5°120.3°
C4N3C2120.5°120.2°
C4N3H30119.8°119.9°
C4BO4BC1B106.7°107.0°
O4BC4BH22110.8°109.9°
O4BC1BN1110.2°110.7°
O4BC1BH27110.4°110.6°
C1BN1C2119.0°119.7°
N1C1BH27110.1°110.6°
N1C2N3119.0°121.0°
N1C2O2121.5°119.5°
N3C2O2119.4°119.6°
C2N3H30119.8°119.8°
H1C84H2109.4°109.5°
H1C84H3109.5°109.5°
H2C84H3109.5°109.5°
H9C6'H10109.5°109.5°
H9C6'H11109.5°109.4°
H10C6'H11109.5°109.5°
H15C8'H16109.4°109.4°
H15C8'H17109.5°109.5°
H16C8'H17109.5°109.4°
H20C5BH21109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O7'C7'C8'N2'178.0°180.0°
O7'C7'N2'C2'3.9°0.0°
O7'C7'N2'H14176.2°180.0°
O7'C7'C8'H150.0°90.0°
O7'C7'C8'H16120.0°30.0°
O7'C7'C8'H17120.0°149.9°
C8'C7'N2'C2'174.3°180.0°
C8'C7'N2'H145.7°0.0°
C7'C8'H15H16120.0°120.0°
C7'C8'H15H17120.0°120.1°
C7'C8'H16H17120.0°120.0°
C7'N2'C2'H14180.0°180.0°
C7'N2'C2'C1'126.6°85.0°
C7'N2'C2'C3'110.1°155.3°
C7'N2'C2'H139.3°35.2°
N2'C7'C8'H15178.0°90.0°
N2'C7'C8'H1658.0°150.0°
N2'C7'C8'H1762.0°30.1°
N2'C2'C1'C3'123.9°119.9°
N2'C2'C1'H13117.8°120.2°
N2'C2'C3'H13119.9°120.1°
N2'C2'C3'O3'54.8°63.2°
N2'C2'C1'O5'178.6°177.5°
N2'C2'C1'O1'60.3°57.5°
N2'C2'C3'C4'179.1°176.9°
N2'C2'C3'H664.7°57.0°
N2'C2'C1'H1259.2°62.5°
O2APAO1AO3A121.6°120.0°
O2APAO1AO5B121.6°120.0°
O2APAO3AO5B118.2°120.0°
O2APAO3APB166.8°40.0°
O2APAO5BC5B61.1°55.0°
O2APAO1AH190.0°180.0°
C1'C2'C3'H13118.3°119.9°
C1'C2'C3'O3'176.6°176.9°
C2'C1'O5'O1'120.2°120.0°
C2'C1'O5'H12121.4°120.0°
C2'C1'O1'H12118.7°120.0°
C1'C2'C3'C4'59.2°56.9°
C2'C1'O5'C5'52.2°61.2°
C2'C1'O1'PB144.3°150.1°
C1'C2'C3'H657.1°62.9°
C1'C2'N2'H1453.5°95.0°
C2'C3'O3'C4'118.4°119.6°
C2'C3'O3'H6118.9°120.2°
C3'C2'C1'O5'54.7°57.6°
C3'C2'C1'O1'63.6°62.4°
C2'C3'C4'H6116.3°119.8°
C2'C3'C4'N4A173.4°176.8°
C2'C3'C4'C5'61.6°56.9°
C2'C3'C4'H553.5°63.0°
C2'C3'O3'H7131.5°60.3°
C3'C2'C1'H12176.9°177.6°
C3'C2'N2'H1469.9°24.7°
O3'C3'C4'H6123.2°120.2°
O3'C3'C4'N4A52.8°63.1°
O3'C3'C4'C5'177.8°176.9°
O3'C3'C4'H567.0°57.0°
O3'C3'C2'H1365.1°57.0°
O74C74N4AC4'9.2°0.0°
O74C74N4AC84179.1°179.7°
O74C74C84H10.0°90.0°
O74C74C84H2120.0°150.0°
O74C74C84H3120.0°30.0°
O74C74N4AH4170.7°179.9°
O5'C1'O1'H12118.5°120.0°
C1'O5'C5'C4'55.0°61.2°
O5'C1'O1'PB92.9°90.0°
C1'O5'C5'C6'174.4°178.9°
C1'O5'C5'H861.4°58.9°
O5'C1'C2'H1363.6°62.2°
C1'O1'PBO3A65.5°175.0°
O1'C1'O5'C5'68.0°58.8°
C1'O1'PBO1B41.9°55.1°
C1'O1'PBO2B174.8°65.0°
O1'C1'C2'H13178.1°177.7°
C3'C4'N4AC5'122.5°119.7°
C3'C4'N4AH5119.3°120.2°
C3'C4'C5'H5115.6°120.0°
C3'C4'N4AC7468.8°155.3°
C3'C4'C5'O5'60.7°57.6°
C3'C4'C5'C6'179.6°177.6°
C3'C4'N4AH4111.2°24.7°
C4'C3'O3'H713.1°180.0°
C3'C4'C5'H856.8°62.4°
C4'C3'C2'H1359.1°63.0°
N4AC4'C5'H5119.2°120.1°
C4'N4AC74H4180.0°179.9°
C4'N4AC74C84169.8°179.7°
N4AC4'C5'O5'174.1°177.5°
N4AC4'C5'C6'54.3°62.5°
N4AC4'C3'H670.3°57.0°
N4AC4'C5'H868.5°57.5°
C5'C4'N4AC74168.7°85.0°
C4'C5'O5'C6'130.6°120.0°
C4'C5'O5'H8116.4°120.0°
C4'C5'C6'H8122.6°120.0°
C5'C4'N4AH411.3°94.9°
C5'C4'C3'H654.7°62.9°
C4'C5'C6'H9180.0°60.0°
C4'C5'C6'H1060.0°180.0°
C4'C5'C6'H1160.0°60.0°
O1APAO3AO5B118.7°120.0°
O1APAO3APB70.1°80.0°
O1APAO5BC5B175.0°65.0°
PAO3APBO1'104.2°160.0°
PAO3APBO1B138.7°40.0°
O3APAO5BC5B58.2°175.0°
PAO3APBO2B3.0°80.0°
O3APAO1AH19121.6°60.0°
O5BPAO3APB48.6°160.0°
PAO5BC5BC4B173.6°180.0°
O5BPAO1AH19121.6°60.1°
PAO5BC5BH2066.7°60.0°
PAO5BC5BH2153.9°60.0°
N4AC74C84H1179.1°89.7°
N4AC74C84H259.2°30.3°
N4AC74C84H360.8°150.3°
C74N4AC4'H550.5°35.1°
C74C84H1H2120.0°120.0°
C74C84H1H3120.0°119.9°
C74C84H2H3120.0°119.9°
C84C74N4AH410.2°0.2°
O3APBO1'O1B107.5°120.0°
O3APBO1'O2B119.6°120.0°
O3APBO1BO2B131.8°119.9°
O3APBO2BH18125.2°60.1°
O5'C5'C6'H8114.0°120.0°
O5'C5'C4'H554.9°62.3°
O5'C5'C6'H956.6°60.0°
O5'C5'C6'H10176.6°60.1°
O5'C5'C6'H1163.4°179.9°
C5'O5'C1'H12173.6°178.9°
O1'PBO1BO2B120.7°120.1°
PBO1'C1'H1225.6°30.0°
O1'PBO2BH18126.9°60.0°
C6'C5'C4'H564.9°57.6°
C5'C6'H9H10120.0°120.1°
C5'C6'H9H11120.0°120.0°
C5'C6'H10H11120.0°120.0°
O1BPBO2BH180.0°180.0°
O5BC5BC4BH20119.7°120.0°
O5BC5BC4BH21119.7°120.0°
O5BC5BC4BC2B58.2°175.7°
O5BC5BC4BO4B177.1°66.5°
O5BC5BH20H21120.9°120.0°
O5BC5BC4BH2264.8°54.5°
C5BC4BC2BC3B107.4°121.5°
C5BC4BC2BO4B115.7°119.4°
C5BC4BC2BH22123.0°121.1°
C5BC4BC2BO3B131.3°119.8°
C5BC4BO4BH22117.0°121.0°
C5BC4BO4BC1B138.8°145.9°
C4BC5BH20H21120.9°120.0°
C5BC4BC2BH238.2°2.6°
C6C5C4H29180.0°180.0°
C5C6N1H28180.0°180.0°
C6C5C4O4178.6°180.0°
C6C5C4N32.9°0.3°
C5C6N1C1B177.7°180.0°
C5C6N1C22.9°0.3°
C4C5C6N12.3°0.0°
C5C4O4N3178.6°179.7°
C5C4N3C23.9°0.3°
C4C5C6H28177.7°180.0°
C5C4N3H30176.0°180.0°
C6N1C1BC3B64.6°65.2°
C6N1C1BO4B51.5°48.9°
C6N1C1BC2179.4°179.8°
C6N1C2N33.9°0.3°
C6N1C2O2180.0°179.7°
C6N1C1BH27173.4°171.8°
N1C6C5H29177.7°180.0°
C2BC3BO2'C1B116.4°112.7°
C2BC3BO2'H25122.0°123.6°
C2BC3BC1BH25114.6°118.2°
C3BC2BC4BO3B121.3°118.7°
C3BC2BC4BH23115.6°118.8°
C3BC2BO3BH23121.8°122.7°
C3BC2BC4BO4B8.3°2.0°
C2BC3BC1BO4B38.8°37.0°
C2BC3BC1BN1158.3°155.6°
C3BC2BC4BH22129.6°117.4°
C3BC2BO3BH24180.0°65.2°
C2BC3BO2'H26180.0°61.5°
C2BC3BC1BH2779.2°81.5°
O2'C3BC1BH25122.3°123.6°
O2'C3BC2BC4B150.5°139.1°
O2'C3BC2BO3B28.5°20.4°
O2'C3BC1BO4B162.0°155.2°
O2'C3BC1BN178.6°86.2°
O2'C3BC2BH2393.9°102.2°
O2'C3BC1BH2744.0°36.7°
C1BC3BC2BC4B27.9°20.9°
C1BC3BC2BO3B94.2°97.8°
C3BC1BO4BC4B34.4°40.1°
C3BC1BO4BN1121.1°118.6°
C3BC1BO4BH27117.2°118.5°
C3BC1BN1H27122.1°123.0°
C3BC1BN1C2116.0°115.0°
C1BC3BC2BH23143.4°139.6°
C1BC3BO2'H2663.5°174.2°
C4BC2BO3BH23122.5°122.5°
C2BC4BO4BH22120.5°119.6°
C2BC4BO4BC1B16.3°26.5°
C2BC4BC5BH20178.0°64.3°
C2BC4BC5BH2161.5°55.7°
C4BC2BO3BH2464.3°180.0°
C4BC2BC3BH2586.7°97.3°
O3BC2BC4BO4B113.0°120.7°
O3BC2BC4BH228.3°1.3°
O3BC2BC3BH25151.2°144.0°
O4C4N3C2177.5°180.0°
O4C4C5H291.4°0.0°
O4C4N3H302.5°0.3°
C4N3C2N14.3°0.0°
C4N3C2H30180.0°179.7°
C4N3C2O2179.4°180.0°
N3C4C5H29177.1°179.7°
C4BO4BC1BN1155.5°158.6°
O4BC4BC5BH2063.2°53.5°
O4BC4BC5BH2157.4°173.5°
O4BC4BC2BH23123.9°116.8°
C4BO4BC1BH2782.8°78.5°
O4BC1BN1H27121.9°122.9°
O4BC1BN1C2127.9°130.8°
C1BO4BC4BH22104.2°93.1°
O4BC1BC3BH2575.8°81.2°
C1BN1C2N3176.7°180.0°
C1BN1C2O20.6°0.0°
N1C1BC3BH2543.7°37.5°
C1BN1C6H282.3°0.0°
N1C2N3O2176.2°180.0°
C2N1C1BH276.0°8.0°
C2N1C6H28177.1°179.7°
N1C2N3H30175.6°179.7°
O2C2N3H300.6°0.3°
H1C84H2H3120.0°120.1°
H4N4AC4'H5129.5°144.9°
H5C4'C3'H6169.8°177.2°
H5C4'C5'H8172.3°177.6°
H6C3'O3'H7109.6°59.8°
H6C3'C2'H13175.4°177.2°
H8C5'C6'H957.4°180.0°
H8C5'C6'H1062.6°60.0°
H8C5'C6'H11177.4°60.1°
H9C6'H10H11120.0°119.9°
H12C1'C2'H1358.6°57.7°
H13C2'N2'H14170.7°144.8°
H15C8'H16H17120.0°120.0°
H20C5BC4BH2254.9°174.5°
H21C5BC4BH22175.5°65.5°
H22C4BC2BH23114.8°123.7°
H23C2BO3BH2458.2°57.5°
H23C2BC3BH2528.9°21.4°
H25C3BO2'H2658.0°62.1°
H25C3BC1BH27166.2°160.3°
H28C6C5H292.3°0.0°

223532

PDB entries from 2024-08-07

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