XPR
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CD | sing | 1.48Å | 1.48Å | |
N | CA | sing | 1.48Å | 1.48Å | |
CD | CG | sing | 1.54Å | 1.56Å | |
CD | C14 | sing | 1.51Å | 1.55Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
CG | CB | sing | 1.55Å | 1.55Å | |
CG | C11 | sing | 1.53Å | 1.51Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CB | CA | sing | 1.54Å | 1.52Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CA | C | sing | 1.51Å | 1.55Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C14 | C13 | sing | 1.53Å | 1.54Å | |
C14 | H25 | sing | 1.09Å | 1.10Å | |
C14 | H26 | sing | 1.09Å | 1.10Å | |
C13 | C12 | sing | 1.53Å | 1.54Å | |
C13 | O2 | sing | 1.43Å | 1.45Å | |
C13 | H27 | sing | 1.09Å | 1.10Å | |
C12 | C11 | sing | 1.53Å | 1.52Å | |
C12 | H28 | sing | 1.09Å | 1.10Å | |
C12 | H29 | sing | 1.09Å | 1.10Å | |
C11 | H30 | sing | 1.09Å | 1.10Å | |
C11 | H31 | sing | 1.09Å | 1.10Å | |
O2 | S | sing | 1.52Å | 1.59Å | |
S | OS1 | doub | 1.42Å | 1.40Å | |
S | OS2 | sing | 1.52Å | 1.55Å | |
S | OS3 | doub | 1.42Å | 1.44Å | |
OS2 | H32 | sing | 0.97Å | 0.95Å | |
C | O | doub | 1.21Å | 1.25Å | |
N | H | sing | 1.01Å | 1.00Å | |
C | OXT | sing | 1.34Å | 28.54Å | |
OXT | HXT | sing | 0.97Å | 0.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CD | N | CA | 110.6° | 105.0° |
N | CD | CG | 104.1° | 104.1° |
N | CD | C14 | 110.5° | 112.8° |
N | CD | HD2 | 112.9° | 109.0° |
CD | N | H | 109.1° | 111.0° |
N | CA | CB | 106.3° | 107.1° |
N | CA | C | 109.4° | 109.9° |
N | CA | HA | 113.0° | 109.9° |
CA | N | H | 109.1° | 111.0° |
CG | CD | C14 | 111.2° | 113.3° |
CG | CD | HD2 | 112.3° | 109.1° |
CD | CG | CB | 102.7° | 101.7° |
CD | CG | C11 | 117.3° | 110.7° |
CD | CG | HG2 | 110.3° | 112.2° |
C14 | CD | HD2 | 106.0° | 108.4° |
CD | C14 | C13 | 112.7° | 111.4° |
CD | C14 | H25 | 108.4° | 109.1° |
CD | C14 | H26 | 108.4° | 109.1° |
CB | CG | C11 | 113.1° | 106.7° |
CB | CG | HG2 | 114.7° | 112.4° |
CG | CB | CA | 106.4° | 104.9° |
CG | CB | HB2 | 110.5° | 110.4° |
CG | CB | HB3 | 110.5° | 110.3° |
C11 | CG | HG2 | 99.2° | 112.6° |
CG | C11 | C12 | 113.0° | 110.9° |
CG | C11 | H30 | 108.3° | 109.2° |
CG | C11 | H31 | 108.3° | 109.2° |
CA | CB | HB2 | 110.5° | 110.4° |
CA | CB | HB3 | 110.5° | 110.3° |
CB | CA | C | 113.3° | 109.9° |
CB | CA | HA | 109.0° | 109.9° |
HB2 | CB | HB3 | 108.4° | 110.4° |
C | CA | HA | 105.9° | 110.1° |
CA | C | O | 124.6° | 120.0° |
CA | C | OXT | 148.2° | 120.0° |
C13 | C14 | H25 | 108.4° | 109.1° |
C13 | C14 | H26 | 108.4° | 109.0° |
C14 | C13 | C12 | 107.9° | 108.3° |
C14 | C13 | O2 | 111.8° | 109.7° |
C14 | C13 | H27 | 110.3° | 109.7° |
H25 | C14 | H26 | 110.5° | 109.1° |
C12 | C13 | O2 | 113.0° | 109.7° |
C12 | C13 | H27 | 108.9° | 109.7° |
C13 | C12 | C11 | 108.4° | 108.6° |
C13 | C12 | H28 | 109.8° | 109.7° |
C13 | C12 | H29 | 109.8° | 109.6° |
O2 | C13 | H27 | 104.9° | 109.7° |
C13 | O2 | S | 128.2° | 114.0° |
C11 | C12 | H28 | 109.8° | 109.6° |
C11 | C12 | H29 | 109.8° | 109.6° |
C12 | C11 | H30 | 108.3° | 109.2° |
C12 | C11 | H31 | 108.3° | 109.2° |
H28 | C12 | H29 | 109.1° | 109.7° |
H30 | C11 | H31 | 110.6° | 109.1° |
O2 | S | OS1 | 104.1° | 106.4° |
O2 | S | OS2 | 111.1° | 107.2° |
O2 | S | OS3 | 109.1° | 106.4° |
OS1 | S | OS2 | 100.6° | 106.4° |
OS1 | S | OS3 | 121.3° | 123.2° |
OS2 | S | OS3 | 110.2° | 106.4° |
S | OS2 | H32 | 109.5° | 114.0° |
O | C | OXT | 64.4° | 120.0° |
C | OXT | HXT | 90.0° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CD | N | CA | H | 120.0° | 120.0° |
N | CD | CG | C14 | 119.0° | 122.9° |
N | CD | CG | HD2 | 122.4° | 116.2° |
N | CD | C14 | HD2 | 122.7° | 120.9° |
N | CD | CG | CB | 31.2° | 39.8° |
N | CD | CG | C11 | 155.9° | 73.3° |
N | CD | CG | HG2 | 91.6° | 160.1° |
CD | N | CA | CB | 7.1° | 24.7° |
CD | N | CA | C | 115.6° | 144.1° |
CD | N | CA | HA | 126.7° | 94.6° |
N | CD | C14 | C13 | 161.3° | 65.1° |
N | CD | C14 | H25 | 78.7° | 174.4° |
N | CD | C14 | H26 | 41.3° | 55.3° |
CA | N | CD | CG | 24.4° | 40.6° |
CA | N | CD | C14 | 95.1° | 163.8° |
CA | N | CD | HD2 | 146.4° | 75.7° |
N | CA | CB | CG | 13.5° | 0.5° |
N | CA | CB | C | 120.2° | 119.4° |
N | CA | CB | HA | 122.1° | 119.3° |
N | CA | CB | HB2 | 133.4° | 118.4° |
N | CA | CB | HB3 | 106.6° | 119.3° |
N | CA | C | HA | 122.1° | 121.2° |
N | CA | C | O | 33.5° | 18.5° |
N | CA | C | OXT | 63.2° | 161.4° |
CG | CD | C14 | HD2 | 122.3° | 121.2° |
CD | CG | CB | C11 | 127.4° | 116.0° |
CD | CG | CB | HG2 | 119.7° | 120.2° |
CD | CG | C11 | HG2 | 118.6° | 126.4° |
CD | CG | CB | CA | 27.5° | 24.0° |
CD | CG | CB | HB2 | 147.4° | 94.9° |
CD | CG | CB | HB3 | 92.5° | 142.8° |
CG | CD | C14 | C13 | 46.2° | 52.8° |
CG | CD | C14 | H25 | 166.2° | 67.6° |
CG | CD | C14 | H26 | 73.8° | 173.3° |
CD | CG | C11 | C12 | 43.4° | 54.2° |
CD | CG | C11 | H30 | 163.3° | 66.2° |
CD | CG | C11 | H31 | 76.6° | 174.6° |
CG | CD | N | H | 144.4° | 79.4° |
C14 | CD | CG | CB | 87.9° | 162.7° |
C14 | CD | CG | C11 | 36.9° | 49.6° |
C14 | CD | CG | HG2 | 149.4° | 77.0° |
CD | C14 | C13 | H25 | 120.0° | 120.5° |
CD | C14 | C13 | H26 | 120.0° | 120.5° |
CD | C14 | H25 | H26 | 118.7° | 119.1° |
CD | C14 | C13 | C12 | 62.2° | 59.1° |
CD | C14 | C13 | O2 | 62.7° | 178.8° |
CD | C14 | C13 | H27 | 178.9° | 60.6° |
C14 | CD | N | H | 24.9° | 43.8° |
HD2 | CD | CG | CB | 153.6° | 76.5° |
HD2 | CD | CG | C11 | 81.7° | 170.5° |
HD2 | CD | CG | HG2 | 30.8° | 43.8° |
HD2 | CD | C14 | C13 | 76.1° | 174.0° |
HD2 | CD | C14 | H25 | 43.9° | 53.6° |
HD2 | CD | C14 | H26 | 163.9° | 65.5° |
HD2 | CD | N | H | 93.6° | 164.3° |
CB | CG | C11 | HG2 | 122.0° | 123.7° |
CG | CB | CA | HB2 | 120.0° | 118.9° |
CG | CB | CA | HB3 | 120.0° | 118.8° |
CG | CB | HB2 | HB3 | 121.3° | 122.3° |
CG | CB | CA | C | 133.6° | 118.9° |
CG | CB | CA | HA | 108.7° | 119.8° |
CB | CG | C11 | C12 | 76.0° | 164.1° |
CB | CG | C11 | H30 | 44.0° | 43.7° |
CB | CG | C11 | H31 | 164.0° | 75.5° |
C11 | CG | CB | CA | 154.9° | 92.0° |
C11 | CG | CB | HB2 | 85.1° | 149.1° |
C11 | CG | CB | HB3 | 34.9° | 26.8° |
CG | C11 | C12 | C13 | 57.1° | 62.1° |
CG | C11 | C12 | H30 | 120.0° | 120.4° |
CG | C11 | C12 | H31 | 120.0° | 120.3° |
CG | C11 | C12 | H28 | 177.1° | 57.7° |
CG | C11 | C12 | H29 | 62.9° | 178.1° |
CG | C11 | H30 | H31 | 118.6° | 119.3° |
HG2 | CG | CB | CA | 92.2° | 144.2° |
HG2 | CG | CB | HB2 | 27.7° | 25.3° |
HG2 | CG | CB | HB3 | 147.8° | 97.0° |
HG2 | CG | C11 | C12 | 162.0° | 72.2° |
HG2 | CG | C11 | H30 | 78.0° | 167.4° |
HG2 | CG | C11 | H31 | 42.0° | 48.2° |
CA | CB | HB2 | HB3 | 121.2° | 122.3° |
CB | CA | C | HA | 119.5° | 121.1° |
CB | CA | C | O | 84.9° | 99.1° |
CB | CA | N | H | 127.1° | 95.3° |
CB | CA | C | OXT | 178.4° | 80.9° |
HB2 | CB | CA | C | 106.4° | 122.2° |
HB2 | CB | CA | HA | 11.3° | 0.9° |
HB3 | CB | CA | C | 13.6° | 0.1° |
HB3 | CB | CA | HA | 131.3° | 121.4° |
CA | C | O | OXT | 144.6° | 180.0° |
C | CA | N | H | 4.4° | 24.1° |
CA | C | OXT | HXT | 90.0° | 180.0° |
HA | CA | C | O | 155.6° | 139.8° |
HA | CA | N | H | 113.3° | 145.4° |
HA | CA | C | OXT | 58.9° | 40.2° |
C13 | C14 | H25 | H26 | 118.7° | 119.0° |
C14 | C13 | C12 | O2 | 124.1° | 119.7° |
C14 | C13 | C12 | H27 | 119.8° | 119.7° |
C14 | C13 | O2 | H27 | 119.5° | 120.6° |
C14 | C13 | C12 | C11 | 66.1° | 63.5° |
C14 | C13 | C12 | H28 | 173.9° | 56.3° |
C14 | C13 | C12 | H29 | 53.9° | 176.8° |
C14 | C13 | O2 | S | 166.3° | 145.0° |
H25 | C14 | C13 | C12 | 177.8° | 61.4° |
H25 | C14 | C13 | O2 | 57.4° | 58.3° |
H25 | C14 | C13 | H27 | 58.9° | 178.9° |
H26 | C14 | C13 | C12 | 57.8° | 179.6° |
H26 | C14 | C13 | O2 | 177.3° | 60.7° |
H26 | C14 | C13 | H27 | 61.1° | 59.9° |
C12 | C13 | O2 | H27 | 118.5° | 120.6° |
C13 | C12 | C11 | H28 | 120.0° | 119.8° |
C13 | C12 | C11 | H29 | 120.0° | 119.7° |
C13 | C12 | H28 | H29 | 120.4° | 120.5° |
C13 | C12 | C11 | H30 | 177.1° | 58.2° |
C13 | C12 | C11 | H31 | 62.9° | 177.5° |
C12 | C13 | O2 | S | 71.8° | 96.2° |
O2 | C13 | C12 | C11 | 58.0° | 176.8° |
O2 | C13 | C12 | H28 | 62.0° | 63.4° |
O2 | C13 | C12 | H29 | 178.0° | 57.1° |
C13 | O2 | S | OS1 | 83.6° | 38.6° |
C13 | O2 | S | OS2 | 23.8° | 75.0° |
C13 | O2 | S | OS3 | 145.6° | 171.5° |
H27 | C13 | C12 | C11 | 174.1° | 56.2° |
H27 | C13 | C12 | H28 | 54.1° | 176.0° |
H27 | C13 | C12 | H29 | 65.9° | 63.5° |
H27 | C13 | O2 | S | 46.8° | 24.4° |
C11 | C12 | H28 | H29 | 120.4° | 120.4° |
C12 | C11 | H30 | H31 | 118.5° | 119.4° |
H28 | C12 | C11 | H30 | 62.9° | 178.0° |
H28 | C12 | C11 | H31 | 57.1° | 62.7° |
H29 | C12 | C11 | H30 | 57.1° | 61.5° |
H29 | C12 | C11 | H31 | 177.1° | 57.8° |
O2 | S | OS1 | OS2 | 115.2° | 114.1° |
O2 | S | OS1 | OS3 | 123.2° | 123.0° |
O2 | S | OS2 | OS3 | 121.1° | 113.5° |
O2 | S | OS2 | H32 | 109.7° | 179.9° |
OS1 | S | OS2 | OS3 | 129.2° | 132.9° |
OS1 | S | OS2 | H32 | 0.0° | 66.4° |
OS3 | S | OS2 | H32 | 129.2° | 66.5° |
O | C | OXT | HXT | 90.0° | 0.0° |