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XOD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C7sing1.43Å1.40Å
C7C1sing1.53Å1.53Å
O5C2sing1.43Å1.40Å
C1C2sing1.53Å1.53Å
C1O1sing1.43Å1.40Å
C1C6sing1.53Å1.54Å
C2C3sing1.53Å1.53Å
C6C5sing1.53Å1.54Å
C3O3sing1.43Å1.40Å
C3C4sing1.53Å1.53Å
C19C18doub1.38Å1.39ÅAromatic
C19C14sing1.39Å1.37ÅAromatic
C18C17sing1.40Å1.39ÅAromatic
C12C13sing1.53Å1.53Å
C12C11sing1.53Å1.53Å
N4C23doub1.32Å1.33ÅAromatic
N4C20sing1.33Å1.32ÅAromatic
C5C4sing1.53Å1.53Å
C5N1sing1.47Å1.46Å
C23C22sing1.39Å1.39ÅAromatic
C4O4sing1.43Å1.41Å
C13N2sing1.46Å1.45Å
C8N1sing1.47Å1.45Å
C8C9sing1.53Å1.52Å
C10C11sing1.53Å1.53Å
C10C9sing1.53Å1.53Å
N2C14sing1.39Å1.46Å
C14C15doub1.39Å1.38ÅAromatic
C17C20sing1.48Å1.54Å
C17C16doub1.39Å1.38ÅAromatic
C20N3doub1.33Å1.32ÅAromatic
C22C21doub1.39Å1.39ÅAromatic
C15C16sing1.38Å1.39ÅAromatic
C15N5sing1.48Å1.44Å
N3C21sing1.32Å1.33ÅAromatic
O7N5sing1.22Å1.40Å
N5O6doub1.22Å1.40Å
N1H1sing1.01Å1.00Å
C4H3sing1.09Å1.10Å
C5H4sing1.09Å1.10Å
C6H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C8H9sing1.09Å1.10Å
C8H10sing1.09Å1.10Å
C10H11sing1.09Å1.10Å
C10H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H14sing1.09Å1.10Å
C21H15sing1.08Å1.08Å
C22H16sing1.08Å1.08Å
C11H17sing1.09Å1.10Å
C11H18sing1.09Å1.10Å
C12H19sing1.09Å1.10Å
C12H20sing1.09Å1.10Å
C16H21sing1.08Å1.08Å
C18H22sing1.08Å1.08Å
C19H23sing1.08Å1.08Å
C2H24sing1.09Å1.10Å
C23H25sing1.08Å1.08Å
C3H26sing1.09Å1.10Å
C9H27sing1.09Å1.10Å
C9H28sing1.09Å1.10Å
N2H29sing0.97Å1.00Å
O1H30sing0.97Å0.95Å
O2H31sing0.97Å0.95Å
O3H32sing0.97Å0.95Å
O4H33sing0.97Å0.95Å
O5H34sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C7C1109.1°109.4°
O2C7H7109.6°109.5°
O2C7H8109.6°109.5°
C7O2H31109.5°114.0°
C7C1C2106.8°109.5°
C7C1O1110.2°109.5°
C7C1C6111.1°109.4°
C1C7H7109.6°109.5°
C1C7H8109.6°109.4°
O5C2C1108.2°109.4°
O5C2C3108.3°109.5°
O5C2H24111.4°109.4°
C2O5H34109.5°114.0°
C2C1O1106.6°109.5°
C2C1C6113.6°109.4°
C1C2C3109.8°109.5°
C1C2H24109.6°109.5°
O1C1C6108.4°109.5°
C1O1H30109.5°114.0°
C1C6C5111.4°109.4°
C1C6H5109.0°109.5°
C1C6H6109.0°109.5°
C2C3O3107.4°109.5°
C2C3C4108.9°109.5°
C3C2H24109.5°109.5°
C2C3H26110.5°109.4°
C6C5C4110.2°109.5°
C6C5N1109.7°109.5°
C6C5H4110.3°109.4°
C5C6H5109.0°109.5°
C5C6H6109.0°109.5°
O3C3C4107.1°109.5°
O3C3H26112.4°109.5°
C3O3H32109.5°114.0°
C3C4C5109.1°109.5°
C3C4O4108.4°109.4°
C3C4H3109.6°109.4°
C4C3H26110.4°109.5°
C18C19C14119.9°120.1°
C19C18C17120.8°119.9°
C19C18H22119.6°120.1°
C18C19H23120.0°120.0°
C19C14N2119.8°120.0°
C19C14C15119.3°120.1°
C14C19H23120.1°120.0°
C18C17C20119.2°120.0°
C18C17C16119.4°119.9°
C17C18H22119.6°120.0°
C13C12C11111.8°109.5°
C12C13N2110.9°109.5°
C12C13H13109.1°109.5°
C12C13H14109.1°109.5°
C13C12H19108.9°109.5°
C13C12H20108.8°109.5°
C12C11C10110.9°109.4°
C12C11H17109.1°109.5°
C12C11H18109.1°109.5°
C11C12H19108.9°109.5°
C11C12H20108.9°109.5°
C23N4C20119.8°120.8°
N4C23C22120.7°119.2°
N4C23H25119.7°120.4°
N4C20C17117.3°119.2°
N4C20N3121.9°121.5°
C4C5N1104.7°109.5°
C5C4O4108.5°109.5°
C5C4H3109.8°109.5°
C4C5H4110.5°109.5°
C5N1C8108.6°111.0°
C5N1H1109.7°111.0°
N1C5H4111.4°109.5°
C23C22C21117.4°118.6°
C23C22H16121.3°120.8°
C22C23H25119.6°120.4°
O4C4H3111.4°109.5°
C4O4H33109.5°114.1°
C13N2C14117.0°120.0°
N2C13H13109.1°109.5°
N2C13H14109.1°109.4°
C13N2H29107.6°120.0°
N1C8C9109.8°109.4°
C8N1H1109.7°111.0°
N1C8H9109.4°109.5°
N1C8H10109.4°109.5°
C8C9C10113.0°109.5°
C9C8H9109.4°109.5°
C9C8H10109.4°109.5°
C8C9H27108.6°109.5°
C8C9H28108.6°109.5°
C11C10C9111.4°109.5°
C11C10H11109.0°109.5°
C11C10H12109.0°109.5°
C10C11H17109.1°109.5°
C10C11H18109.1°109.4°
C9C10H11109.0°109.5°
C9C10H12109.0°109.4°
C10C9H27108.6°109.4°
C10C9H28108.6°109.5°
N2C14C15120.8°119.9°
C14N2H29107.6°120.0°
C14C15C16121.4°120.0°
C14C15N5118.4°120.0°
C20C17C16121.4°120.0°
C17C20N3120.8°119.2°
C17C16C15119.2°119.9°
C17C16H21120.4°120.0°
C20N3C21121.2°120.7°
C22C21N3119.0°119.2°
C22C21H15120.5°120.4°
C21C22H16121.3°120.7°
C16C15N5120.2°120.0°
C15C16H21120.4°120.0°
C15N5O7118.4°120.0°
C15N5O6120.5°120.0°
N3C21H15120.5°120.4°
O7N5O6121.1°120.0°
H5C6H6109.5°109.5°
H7C7H8109.4°109.5°
H9C8H10109.5°109.4°
H11C10H12109.5°109.5°
H13C13H14109.5°109.5°
H17C11H18109.5°109.6°
H19C12H20109.5°109.5°
H27C9H28109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C7C1H7119.9°120.0°
O2C7C1H8120.0°120.0°
O2C7C1C274.4°55.0°
O2C7C1O1170.2°65.0°
O2C7C1C650.1°175.0°
O2C7H7H8120.2°120.0°
C7C1C2O565.9°60.0°
C7C1C2O1117.8°120.0°
C7C1C2C6122.9°120.0°
C7C1O1C6121.8°120.0°
C7C1C2C3176.1°180.0°
C7C1C6C5170.5°NaN°
C7C1C6H569.2°60.0°
C7C1C6H650.2°60.0°
C1C7H7H8120.2°120.0°
C7C1C2H2455.8°59.9°
C7C1O1H30180.0°60.0°
C1C7O2H31180.0°180.0°
O5C2C1C3118.0°120.0°
O5C2C1H24121.7°119.9°
O5C2C1O151.9°60.0°
O5C2C1C6171.2°180.0°
O5C2C3H24121.7°120.0°
O5C2C3O366.6°60.0°
O5C2C3C4177.7°180.0°
O5C2C3H2656.3°60.0°
C2C1O1C6122.7°120.0°
C1C2C3H24120.4°120.1°
C2C1C6C549.9°60.0°
C1C2C3O3175.4°179.9°
C1C2C3C459.7°60.0°
C2C1C6H5170.2°60.0°
C2C1C6H670.3°180.0°
C2C1C7H745.5°65.0°
C2C1C7H8165.6°175.0°
C1C2C3H2661.6°60.0°
C2C1O1H3064.5°60.0°
C1C2O5H34180.0°180.0°
O1C1C2C366.1°60.0°
O1C1C6C568.4°60.0°
O1C1C6H551.9°180.0°
O1C1C6H6171.4°60.0°
O1C1C7H769.9°175.0°
O1C1C7H850.2°55.0°
O1C1C2H24173.6°179.9°
C6C1C2C353.2°60.0°
C1C6C5H5120.3°120.0°
C1C6C5H6120.3°120.0°
C1C6C5C453.2°60.0°
C1C6C5N161.6°60.0°
C1C6C5H4175.4°180.0°
C1C6H5H6119.1°120.0°
C6C1C7H7170.0°55.0°
C6C1C7H869.9°65.0°
C6C1C2H2467.1°60.0°
C6C1O1H3058.2°180.0°
C2C3O3C4116.9°120.0°
C2C3O3H26121.7°120.0°
C2C3C4H26121.4°119.9°
C2C3C4C564.6°60.0°
C2C3C4O4177.4°180.0°
C2C3C4H355.6°60.0°
C2C3O3H32180.0°180.0°
C3C2O5H3461.1°60.0°
C6C5C4C361.0°60.0°
C6C5C4N1117.9°120.0°
C6C5C4H4122.1°120.0°
C6C5N1H4122.4°120.0°
C6C5C4O4179.0°180.0°
C6C5N1C865.3°155.0°
C6C5N1H1174.8°81.1°
C6C5C4H359.1°60.0°
C5C6H5H6119.1°120.0°
O3C3C4H26122.7°120.0°
O3C3C4C5179.5°180.0°
O3C3C4O461.6°60.0°
O3C3C4H360.2°60.0°
O3C3C2H2455.1°60.0°
C3C4C5O4117.9°120.0°
C3C4C5H3120.1°120.0°
C3C4C5N156.8°60.0°
C3C4O4H3120.7°120.0°
C3C4C5H4176.9°180.0°
C4C3C2H2460.6°60.1°
C4C3O3H3263.1°60.0°
C3C4O4H33180.0°60.0°
C18C19C14H23180.0°179.8°
C19C18C17H22180.0°180.0°
C18C19C14N2179.7°179.9°
C18C19C14C150.2°0.0°
C19C18C17C20179.6°180.0°
C19C18C17C160.3°0.5°
C14C19C18C170.0°0.2°
C19C14N2C1346.8°5.8°
C19C14N2C15179.5°179.9°
C19C14C15C160.2°0.1°
C19C14C15N5179.8°179.7°
C14C19C18H22180.0°179.8°
C19C14N2H29167.9°174.1°
C18C17C20N423.6°179.5°
C18C17C20C16179.3°179.5°
C18C17C20N3155.2°0.5°
C18C17C16C150.3°0.5°
C18C17C16H21179.7°179.4°
C17C18C19H23180.0°180.0°
C13C12C11H19120.3°120.0°
C13C12C11H20120.3°120.0°
C12C13N2H13120.2°120.0°
C12C13N2H14120.2°120.0°
C13C12C11C10122.9°180.0°
C12C13N2C14167.7°179.9°
C12C13H13H14119.3°120.0°
C13C12C11H17116.9°60.0°
C13C12C11H182.7°60.1°
C13C12H19H20118.9°120.0°
C12C13N2H2971.2°0.0°
C11C12C13N2111.2°180.0°
C12C11C10H17120.2°120.0°
C12C11C10H18120.2°120.0°
C12C11C10C9130.6°180.0°
C12C11C10H1110.3°60.0°
C12C11C10H12109.1°60.0°
C11C12C13H13128.6°60.0°
C11C12C13H149.0°60.0°
C12C11H17H18119.4°120.1°
C11C12H19H20119.0°120.0°
N4C23C22H25180.0°180.0°
C23N4C20C17179.2°180.0°
C23N4C20N30.4°0.1°
N4C23C22C210.0°0.0°
N4C23C22H16180.0°179.9°
C20N4C23C220.2°0.0°
N4C20C17N3178.8°180.0°
N4C20C17C16157.1°0.0°
N4C20N3C210.5°0.0°
C20N4C23H25179.8°180.0°
C4C5N1H4119.4°120.0°
C5C4O4H3120.9°120.0°
C4C5N1C8176.4°85.0°
C4C5N1H156.6°38.9°
C4C5C6H5173.4°60.0°
C4C5C6H667.1°180.0°
C5C4C3H2656.8°60.0°
C5C4O4H3361.6°180.0°
N1C5C4O461.1°60.0°
C5N1C8H1119.9°123.9°
C5N1C8C9163.8°180.0°
N1C5C4H3177.0°180.0°
N1C5C6H558.7°180.0°
N1C5C6H6178.1°60.0°
C5N1C8H976.1°60.0°
C5N1C8H1043.8°60.0°
C23C22C21H16180.0°179.9°
C23C22C21N30.1°0.0°
C23C22C21H15179.9°180.0°
O4C4C5H458.9°60.0°
O4C4C3H2661.1°60.0°
C13N2C14H29121.1°179.9°
C13N2C14C15132.7°174.1°
N2C13H13H14119.3°120.0°
N2C13C12H19128.5°60.0°
N2C13C12H209.2°60.0°
N1C8C9H9120.0°120.0°
N1C8C9H10120.0°120.0°
N1C8C9C10118.8°180.0°
C8N1C5H457.0°35.0°
N1C8H9H10119.8°120.1°
N1C8C9H27120.6°60.0°
N1C8C9H281.7°60.0°
C8C9C10C11127.8°180.0°
C8C9C10H27120.5°120.0°
C8C9C10H28120.5°120.0°
C9C8N1H143.9°56.1°
C9C8H9H10119.8°120.0°
C8C9C10H117.6°60.0°
C8C9C10H12111.9°60.0°
C8C9H27H28118.4°120.1°
C11C10C9H11120.3°120.0°
C11C10C9H12120.3°120.0°
C11C10H11H12119.1°120.1°
C10C11H17H18119.4°120.0°
C10C11C12H192.6°60.0°
C10C11C12H20116.8°60.0°
C11C10C9H277.3°60.0°
C11C10C9H28111.7°60.0°
C10C9C8H91.2°60.0°
C10C9C8H10121.1°60.0°
C9C10H11H12119.1°119.9°
C9C10C11H17109.2°60.0°
C9C10C11H1810.4°60.0°
C10C9H27H28118.4°119.9°
N2C14C15C16179.6°179.9°
N2C14C15N50.3°0.4°
C14N2C13H1347.5°60.1°
C14N2C13H1472.1°60.0°
N2C14C19H230.3°0.3°
C14C15C16C170.1°0.3°
C14C15C16N5180.0°179.7°
C14C15N5O747.7°37.8°
C14C15N5O6132.5°142.2°
C14C15C16H21179.9°179.7°
C15C14C19H23179.8°179.8°
C15C14N2H2911.6°6.0°
C20C17C16C15179.6°180.0°
C17C20N3C21179.3°180.0°
C20C17C16H210.4°0.1°
C20C17C18H220.4°0.0°
C16C17C20N324.1°180.0°
C17C16C15H21180.0°179.9°
C17C16C15N5179.9°179.9°
C16C17C18H22179.7°179.5°
C20N3C21C220.3°0.0°
C20N3C21H15179.7°180.0°
C22C21N3H15180.0°180.0°
C21C22C23H25180.0°180.0°
C16C15N5O7132.3°142.6°
C16C15N5O647.5°37.5°
C15N5O7O6179.8°180.0°
N5C15C16H210.1°0.0°
N3C21C22H16179.9°179.9°
H1N1C5H462.8°159.0°
H1N1C8H9164.0°176.1°
H1N1C8H1076.1°63.9°
H3C4C5H463.0°60.0°
H3C4C3H26177.0°180.0°
H3C4O4H3359.3°60.0°
H4C5C6H564.3°60.0°
H4C5C6H655.1°60.0°
H7C7O2H3160.1°60.0°
H8C7O2H3160.0°60.1°
H9C8C9H27119.3°180.0°
H9C8C9H28121.7°60.0°
H10C8C9H270.6°60.0°
H10C8C9H28118.4°180.0°
H11C10C11H17130.5°60.0°
H11C10C11H18109.9°180.0°
H11C10C9H27113.0°60.1°
H11C10C9H28128.1°180.0°
H12C10C11H1711.1°180.0°
H12C10C11H18130.7°59.9°
H12C10C9H27127.6°180.0°
H12C10C9H288.6°60.0°
H13C13C12H198.2°60.0°
H13C13C12H20111.1°180.0°
H13C13N2H29168.6°120.1°
H14C13C12H19111.3°180.0°
H14C13C12H20129.4°60.0°
H14C13N2H2949.0°119.9°
H15C21C22H160.0°0.0°
H16C22C23H250.0°0.1°
H17C11C12H19122.8°60.0°
H17C11C12H203.4°180.0°
H18C11C12H19117.6°179.9°
H18C11C12H20123.0°59.9°
H22C18C19H230.0°0.0°
H24C2C3H26178.0°180.0°
H24C2O5H3459.4°60.0°
H26C3O3H3258.3°60.1°

222415

PDB entries from 2024-07-10

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