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SummaryGeometryRelated PDB entries

XO7

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C01C02sing1.53Å1.55Å
F14C13sing1.40Å1.37Å
C02C03sing1.53Å1.53Å
F16C13sing1.40Å1.36Å
C13O12sing1.43Å1.39Å
C13F15sing1.40Å1.35Å
C03C04sing1.53Å1.62Å
N25C24sing1.34Å1.33ÅAromatic
N25C26doub1.30Å1.32ÅAromatic
O12C11sing1.36Å1.40Å
C24C23doub1.35Å1.40ÅAromatic
C05C04sing1.53Å1.49Å
C05N06sing1.46Å1.47Å
C11C10doub1.39Å1.41ÅAromatic
C11C17sing1.39Å1.39ÅAromatic
C10C09sing1.38Å1.38ÅAromatic
C04N21sing1.47Å1.40Å
C17C07doub1.39Å1.38ÅAromatic
C09C08doub1.38Å1.40ÅAromatic
C07C08sing1.39Å1.41ÅAromatic
C07N06sing1.40Å1.48Å
C26N27sing1.35Å1.34ÅAromatic
N06C18sing1.34Å1.47Å
C23C22sing1.51Å1.55Å
C23N27sing1.37Å1.32ÅAromatic
N21C22sing1.47Å1.30Å
N21C20sing1.47Å1.35Å
N27C28sing1.47Å1.45Å
C35C34doub1.38Å1.40ÅAromatic
C35C29sing1.38Å1.42ÅAromatic
C34C32sing1.38Å1.41ÅAromatic
C18C20sing1.50Å1.61Å
C18O19doub1.21Å1.17Å
C28C29sing1.51Å1.52Å
C29C30doub1.38Å1.40ÅAromatic
C32BR33sing1.89Å1.93Å
C32C31doub1.38Å1.41ÅAromatic
C30C31sing1.38Å1.39ÅAromatic
C10H1sing1.08Å1.08Å
C17H2sing1.08Å1.08Å
C20H3sing1.09Å1.10Å
C20H4sing1.09Å1.10Å
C22H5sing1.09Å1.10Å
C22H6sing1.09Å1.10Å
C24H7sing1.08Å1.08Å
C26H8sing1.08Å1.08Å
C28H9sing1.09Å1.10Å
C28H10sing1.09Å1.10Å
C01H11sing1.09Å1.10Å
C01H12sing1.09Å1.10Å
C01H13sing1.09Å1.10Å
C02H14sing1.09Å1.10Å
C02H15sing1.09Å1.10Å
C03H16sing1.09Å1.10Å
C03H17sing1.09Å1.10Å
C04H18sing1.09Å1.10Å
C05H19sing1.09Å1.10Å
C05H20sing1.09Å1.10Å
C08H21sing1.08Å1.08Å
C09H22sing1.08Å1.08Å
C30H23sing1.08Å1.08Å
C31H24sing1.08Å1.08Å
C34H25sing1.08Å1.08Å
C35H26sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C01C02C03113.1°109.5°
C02C01H11109.5°109.5°
C02C01H12109.5°109.5°
C02C01H13109.5°109.5°
C01C02H14108.5°109.5°
C01C02H15108.5°109.5°
F14C13F16107.6°109.4°
F14C13O12110.1°109.4°
F14C13F15110.2°109.4°
C02C03C04112.6°109.5°
C03C02H14108.6°109.4°
C03C02H15108.5°109.4°
C02C03H16108.7°109.5°
C02C03H17108.7°109.5°
F16C13O12108.7°109.5°
F16C13F15108.6°109.5°
O12C13F15111.6°109.5°
C13O12C11120.0°117.0°
C03C04C05111.4°109.6°
C03C04N21110.8°109.6°
C04C03H16108.7°109.5°
C04C03H17108.7°109.5°
C03C04H18106.8°109.6°
C24N25C26108.9°109.3°
N25C24C23107.6°108.0°
N25C24H7126.2°126.0°
N25C26N27108.3°108.7°
N25C26H8125.9°125.7°
O12C11C10118.8°120.0°
O12C11C17122.3°120.1°
C24C23C22126.9°126.6°
C24C23N27105.6°106.8°
C23C24H7126.2°126.0°
C04C05N06115.5°110.0°
C05C04N21110.0°108.7°
C05C04H18108.4°109.7°
C04C05H19107.9°109.4°
C04C05H20108.0°109.4°
C05N06C07120.6°118.5°
C05N06C18116.9°122.9°
N06C05H19108.0°109.2°
N06C05H20107.9°109.5°
C10C11C17118.9°120.0°
C11C10C09120.6°120.1°
C11C10H1119.7°120.0°
C11C17C07121.0°119.9°
C11C17H2119.5°120.1°
C10C09C08120.2°120.1°
C09C10H1119.7°119.9°
C10C09H22119.9°119.9°
C04N21C22113.4°111.0°
C04N21C20115.2°110.1°
N21C04H18109.5°109.6°
C17C07C08119.8°119.9°
C17C07N06118.7°120.1°
C07C17H2119.5°120.0°
C09C08C07119.6°120.0°
C09C08H21120.2°120.0°
C08C09H22119.9°119.9°
C08C07N06121.4°120.0°
C07C08H21120.2°120.0°
C07N06C18122.5°118.5°
C26N27C23109.6°107.3°
C26N27C28124.9°126.4°
N27C26H8125.8°125.6°
N06C18C20116.3°122.7°
N06C18O19121.9°118.6°
C22C23N27127.5°126.6°
C23C22N21109.3°109.5°
C23C22H5109.5°109.5°
C23C22H6109.5°109.5°
C23N27C28125.4°126.3°
C22N21C20112.4°111.1°
N21C22H5109.5°109.5°
N21C22H6109.5°109.5°
N21C20C18116.2°109.9°
N21C20H3107.8°109.4°
N21C20H4107.7°109.4°
N27C28C29110.2°109.4°
N27C28H9109.3°109.5°
N27C28H10109.3°109.5°
C34C35C29119.0°120.0°
C35C34C32119.3°120.0°
C35C34H25120.3°120.0°
C34C35H26120.5°120.0°
C35C29C28121.7°120.0°
C35C29C30121.1°120.0°
C29C35H26120.5°120.0°
C34C32BR33121.8°120.0°
C34C32C31121.3°120.0°
C32C34H25120.4°120.0°
C20C18O19121.8°118.7°
C18C20H3107.7°109.4°
C18C20H4107.8°109.4°
C28C29C30117.3°120.0°
C29C28H9109.3°109.5°
C29C28H10109.3°109.5°
C29C30C31119.8°120.0°
C29C30H23120.1°120.0°
BR33C32C31116.9°120.0°
C32C31C30119.6°120.0°
C32C31H24120.2°120.0°
C31C30H23120.1°120.0°
C30C31H24120.2°120.0°
H3C20H4109.5°109.3°
H5C22H6109.4°109.5°
H9C28H10109.5°109.5°
H11C01H12109.5°109.4°
H11C01H13109.4°109.5°
H12C01H13109.4°109.4°
H14C02H15109.5°109.6°
H16C03H17109.5°109.5°
H19C05H20109.5°109.3°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C01C02C03H14120.6°120.0°
C01C02C03H15120.5°120.0°
C01C02C03C04141.4°175.0°
C02C01H11H12120.0°120.0°
C02C01H11H13120.0°120.0°
C02C01H12H13120.0°120.0°
C01C02H14H15118.3°120.0°
C01C02C03H1698.1°55.0°
C01C02C03H1720.9°65.0°
F14C13F16O12119.2°120.0°
F14C13F16F15119.2°119.9°
F14C13O12F15122.7°120.0°
F14C13O12C1158.4°180.0°
C02C03C04H16120.5°120.0°
C02C03C04H17120.5°120.0°
C02C03C04C0539.6°176.9°
C02C03C04N21162.3°63.9°
C03C02C01H11180.0°60.0°
C03C02C01H1260.0°60.0°
C03C02C01H1360.0°180.0°
C03C02H14H15118.3°120.0°
C02C03H16H17118.6°120.0°
C02C03C04H1878.5°56.4°
F16C13O12F15119.7°120.1°
F16C13O12C11176.0°60.0°
C13O12C11C10170.0°0.1°
C13O12C11C1710.3°180.0°
F15C13O12C1164.2°60.1°
C03C04C05N21123.2°119.7°
C03C04C05H18117.2°120.4°
C03C04C05N0669.7°170.2°
C03C04N21H18117.5°120.3°
C03C04N21C2272.2°65.4°
C03C04N21C2059.3°171.1°
C04C03C02H1420.9°65.0°
C04C03C02H1598.1°55.1°
C04C03H16H17118.6°120.0°
C03C04C05H19169.4°69.8°
C03C04C05H2051.2°49.9°
N25C24C23H7180.0°179.7°
C24N25C26N270.1°0.3°
N25C24C23C22179.9°179.8°
N25C24C23N270.7°0.2°
C24N25C26H8179.8°179.8°
C26N25C24C230.5°0.0°
N25C26N27H8180.0°179.5°
N25C26N27C230.4°0.4°
N25C26N27C28178.9°179.9°
C26N25C24H7179.4°179.7°
O12C11C10C17179.7°179.9°
O12C11C10C09179.8°180.0°
O12C11C17C07179.8°180.0°
O12C11C10H10.2°0.4°
O12C11C17H20.2°0.3°
C24C23N27C260.7°0.4°
C24C23C22N27178.9°179.9°
C24C23C22N2198.7°25.8°
C24C23N27C28179.3°180.0°
C24C23C22H521.3°94.2°
C24C23C22H6141.3°145.8°
C04C05N06H19120.9°120.0°
C04C05N06H20120.9°120.3°
C05C04N21H18119.0°120.0°
C04C05N06C07157.9°161.8°
C04C05N06C1822.3°18.3°
C05C04N21C22164.3°54.3°
C05C04N21C2064.2°69.2°
C05C04C03H1680.8°56.9°
C05C04C03H17160.1°63.1°
C04C05H19H20117.3°119.8°
N06C05C04N2153.5°50.5°
C05N06C07C1754.0°111.4°
C05N06C07C08125.4°68.5°
C05N06C07C18179.8°179.9°
C05N06C18C200.1°1.7°
C05N06C18O19179.9°178.2°
N06C05C04H18173.2°69.4°
N06C05H19H20117.2°119.8°
C11C10C09H1180.0°179.6°
C10C11C17C070.1°0.1°
C11C10C09C080.3°0.3°
C10C11C17H2179.9°179.8°
C11C10C09H22179.7°179.7°
C17C11C10C090.1°0.1°
C11C17C07H2180.0°179.7°
C11C17C07C080.3°0.3°
C11C17C07N06179.6°179.7°
C17C11C10H1179.9°179.7°
C10C09C08H22180.0°180.0°
C10C09C08C070.7°0.5°
C10C09C08H21179.3°180.0°
C04N21C22C2376.3°163.9°
C04N21C22C20132.8°122.9°
C04N21C20C1841.3°50.3°
C04N21C20H379.6°69.9°
C04N21C20H4162.3°170.4°
C04N21C22H543.7°43.9°
C04N21C22H6163.7°76.1°
N21C04C03H1641.9°176.1°
N21C04C03H1777.2°56.1°
N21C04C05H1967.4°170.4°
N21C04C05H20174.3°69.8°
C17C07C08C090.7°0.5°
C17C07C08N06179.3°179.9°
C17C07N06C18125.9°68.7°
C17C07C08H21179.3°180.0°
C09C08C07H21180.0°179.5°
C09C08C07N06180.0°179.4°
C08C09C10H1179.7°179.9°
C08C07N06C1854.8°111.4°
C08C07C17H2179.7°180.0°
C07C08C09H22179.3°179.5°
C07N06C18C20179.8°178.4°
C07N06C18O190.3°1.7°
N06C07C17H20.3°0.0°
C07N06C05H1981.3°41.7°
C07N06C05H2037.0°78.0°
N06C07C08H210.0°0.0°
C26N27C23C22179.8°179.7°
C26N27C23C28178.6°179.6°
C26N27C28C29109.1°93.9°
C26N27C28H9130.7°146.1°
C26N27C28H1011.0°26.0°
N06C18C20N218.5°17.2°
N06C18C20O19180.0°180.0°
N06C18C20H3112.5°103.0°
N06C18C20H4129.4°137.3°
C18N06C05H1998.6°138.4°
C18N06C05H20143.2°101.9°
C23C22N21H5120.0°120.0°
C23C22N21H6120.0°120.0°
C23C22N21C20150.8°73.2°
C22C23N27C281.6°0.0°
C23C22H5H6120.1°120.0°
C22C23C24H70.1°0.1°
N27C23C22N2180.2°154.1°
C23N27C28C2972.5°85.6°
N27C23C22H5159.8°85.9°
N27C23C22H639.8°34.1°
N27C23C24H7179.2°179.9°
C23N27C26H8179.7°180.0°
C23N27C28H947.6°34.4°
C23N27C28H10167.4°154.4°
C22N21C20C18173.3°73.2°
C22N21C20H352.3°166.7°
C22N21C20H465.8°47.0°
N21C22H5H6120.1°120.0°
C22N21C04H1845.3°174.3°
N21C20C18H3121.0°120.2°
N21C20C18H4121.0°120.1°
N21C20C18O19171.6°162.8°
N21C20H3H4116.9°119.7°
C20N21C22H589.2°166.8°
C20N21C22H630.8°46.8°
C20N21C04H18176.8°50.8°
N27C28C29C3536.5°90.2°
N27C28C29H9120.1°120.0°
N27C28C29H10120.1°120.0°
N27C28C29C30143.7°90.2°
C28N27C26H81.1°0.4°
N27C28H9H10119.7°120.0°
C34C35C29H26180.0°179.4°
C35C34C32H25180.0°179.8°
C34C35C29C28179.8°179.8°
C34C35C29C300.0°0.6°
C35C34C32BR33179.4°179.7°
C35C34C32C310.4°0.2°
C29C35C34C320.2°0.5°
C35C29C28C30179.8°179.6°
C35C29C30C310.1°0.3°
C35C29C28H9156.6°29.8°
C35C29C28H1083.6°149.9°
C35C29C30H23179.9°179.8°
C29C35C34H25179.8°179.7°
C34C32BR33C31179.9°179.9°
C34C32C31C300.5°0.1°
C34C32C31H24179.5°180.0°
C32C34C35H26179.8°179.9°
C18C20H3H4116.9°119.8°
O19C18C20H367.4°77.1°
O19C18C20H450.6°42.7°
C28C29C30C31179.9°180.0°
C29C28H9H10119.6°120.0°
C28C29C30H230.1°0.1°
C28C29C35H260.2°0.3°
C29C30C31C320.4°0.0°
C29C30C31H23180.0°179.9°
C30C29C28H923.6°149.8°
C30C29C28H1096.2°29.8°
C29C30C31H24179.6°179.9°
C30C29C35H26180.0°180.0°
BR33C32C31C30179.3°180.0°
BR33C32C31H240.7°0.1°
BR33C32C34H250.6°0.1°
C32C31C30H24180.0°179.9°
C32C31C30H23179.6°179.9°
C31C32C34H25179.6°180.0°
H1C10C09H220.3°0.1°
H11C01H12H13120.0°120.0°
H11C01C02H1459.5°60.0°
H11C01C02H1559.4°179.9°
H12C01C02H1460.6°179.9°
H12C01C02H15179.5°60.0°
H13C01C02H14179.4°60.1°
H13C01C02H1560.5°60.0°
H14C02C03H16141.3°175.0°
H14C02C03H1799.6°55.0°
H15C02C03H1622.4°64.9°
H15C02C03H17141.5°175.0°
H16C03C04H18161.0°63.5°
H17C03C04H1841.9°176.4°
H18C04C05H1952.3°50.6°
H18C04C05H2066.0°170.3°
H21C08C09H220.7°0.0°
H23C30C31H240.4°0.0°
H25C34C35H260.2°0.2°

222415

PDB entries from 2024-07-10

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