Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

XNV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
H01BC01sing1.09Å1.10Å
C02C01sing1.53Å1.54Å
H01C01sing1.09Å1.10Å
C01H01Asing1.09Å1.10Å
O03C02sing1.45Å1.44Å
H02AC02sing1.09Å1.10Å
C02H02sing1.09Å1.10Å
O03C04sing1.34Å1.38Å
C05C04sing1.51Å1.52Å
C04O38doub1.21Å1.21Å
H05AC05sing1.09Å1.10Å
H05C05sing1.09Å1.10Å
C05C06sing1.53Å1.56Å
C06H06sing1.09Å1.10Å
C06C07sing1.53Å1.56Å
C06H06Asing1.09Å1.10Å
N08C07sing1.47Å1.46Å
C07H07sing1.09Å1.10Å
C07C31sing1.53Å1.55Å
HN08N08sing0.97Å1.00Å
C09N08sing1.35Å1.37Å
C10C09sing1.51Å1.54Å
C09O30doub1.21Å1.22Å
C27C10sing1.53Å1.53Å
H10C10sing1.09Å1.10Å
C10N11sing1.47Å1.47Å
C25N11sing1.36Å1.38Å
N11C12sing1.35Å1.43Å
C12O26doub1.22Å1.24Å
C12C13sing1.41Å1.46Å
C23C13doub1.37Å1.38Å
C13N14sing1.40Å1.40Å
C15N14sing1.35Å1.41Å
N14HN14sing0.97Å1.00Å
O22C15doub1.22Å1.23Å
C15C16sing1.48Å1.50Å
C16C21sing1.42Å1.44ÅAromatic
C16N17doub1.31Å1.33ÅAromatic
N17O18sing1.21Å1.35ÅAromatic
C19O18sing1.34Å1.36ÅAromatic
C21C19doub1.35Å1.38ÅAromatic
C19C20sing1.51Å1.48Å
H20BC20sing1.09Å1.10Å
C20H20sing1.09Å1.10Å
C20H20Asing1.09Å1.10Å
H21C21sing1.08Å1.08Å
C24C23sing1.40Å1.42Å
C23H23sing1.08Å1.08Å
C25C24doub1.35Å1.36Å
H24C24sing1.08Å1.08Å
H25C25sing1.08Å1.08Å
C28C27sing1.47Å1.45Å
H27C27sing1.09Å1.10Å
C27H27Asing1.09Å1.10Å
C29C28trip1.17Å1.17Å
H29C29sing1.05Å1.06Å
H31C31sing1.09Å1.10Å
C31H31Asing1.09Å1.10Å
C31C32sing1.53Å1.51Å
H32C32sing1.09Å1.10Å
C32C33sing1.55Å1.56Å
C32C36sing1.51Å1.50Å
H33C33sing1.09Å1.10Å
C33H33Asing1.09Å1.10Å
C33C34sing1.54Å1.52Å
H34C34sing1.09Å1.10Å
C34N35sing1.47Å1.46Å
C34H34Asing1.09Å1.10Å
C36N35sing1.34Å1.37Å
N35HN35sing0.97Å1.00Å
O37C36doub1.21Å1.22Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
H01BC01C02109.5°109.5°
H01BC01H01109.5°109.4°
H01BC01H01A109.5°109.4°
C02C01H01109.4°109.5°
C02C01H01A109.5°109.5°
C01C02O03112.7°109.4°
C01C02H02A108.4°109.5°
C01C02H02108.4°109.5°
H01C01H01A109.5°109.5°
O03C02H02A108.4°109.5°
O03C02H02108.4°109.5°
C02O03C04117.4°117.0°
H02AC02H02110.6°109.6°
O03C04C05110.0°120.0°
O03C04O38118.2°120.0°
C05C04O38124.7°120.0°
C04C05H05A106.6°109.5°
C04C05H05106.7°109.5°
C04C05C06118.3°109.5°
H05AC05H05112.1°109.4°
H05AC05C06106.7°109.5°
H05C05C06106.6°109.5°
C05C06H06108.6°109.5°
C05C06C07112.1°109.5°
C05C06H06A108.6°109.5°
H06C06C07108.6°109.5°
H06C06H06A110.3°109.4°
C07C06H06A108.6°109.5°
C06C07N08109.3°109.5°
C06C07H07107.9°109.4°
C06C07C31112.7°109.5°
N08C07H07109.8°109.5°
N08C07C31110.9°109.5°
C07N08HN08119.4°120.0°
C07N08C09121.3°120.0°
H07C07C31106.1°109.5°
C07C31H31107.4°109.4°
C07C31H31A107.4°109.5°
C07C31C32115.9°109.5°
HN08N08C09119.4°120.0°
N08C09C10116.0°120.0°
N08C09O30123.6°120.0°
C10C09O30120.4°120.0°
C09C10C27110.2°109.5°
C09C10H10109.2°109.5°
C09C10N11111.0°109.4°
C27C10H10107.0°109.5°
C27C10N11113.1°109.5°
C10C27C28107.9°109.4°
C10C27H27110.0°109.5°
C10C27H27A110.0°109.5°
H10C10N11106.1°109.5°
C10N11C25125.4°119.6°
C10N11C12114.6°119.6°
C25N11C12120.0°120.8°
N11C25C24121.3°120.9°
N11C25H25119.4°119.6°
N11C12O26118.5°120.0°
N11C12C13118.1°119.9°
O26C12C13123.4°120.1°
C12C13C23119.2°119.2°
C12C13N14116.0°120.4°
C23C13N14124.8°120.4°
C13C23C24119.7°119.2°
C13C23H23120.1°120.4°
C13N14C15121.5°120.0°
C13N14HN14119.3°120.0°
C15N14HN14119.2°120.0°
N14C15O22124.8°120.0°
N14C15C16112.9°120.0°
O22C15C16122.2°120.0°
C15C16C21125.9°127.0°
C15C16N17125.1°126.9°
C21C16N17108.9°106.1°
C16C21C19105.4°103.9°
C16C21H21127.3°128.1°
C16N17O18107.0°111.5°
N17O18C19112.0°111.8°
O18C19C21106.7°106.7°
O18C19C20123.3°126.6°
C21C19C20130.0°126.7°
C19C21H21127.3°128.0°
C19C20H20B109.5°109.5°
C19C20H20109.4°109.5°
C19C20H20A109.5°109.5°
H20BC20H20109.4°109.5°
H20BC20H20A109.5°109.5°
H20C20H20A109.5°109.4°
C24C23H23120.2°120.4°
C23C24C25121.5°120.0°
C23C24H24119.3°120.0°
C25C24H24119.2°120.0°
C24C25H25119.3°119.6°
C28C27H27110.0°109.5°
C28C27H27A110.0°109.4°
C27C28C29179.7°179.9°
H27C27H27A109.0°109.5°
C28C29H29180.0°180.0°
H31C31H31A111.5°109.5°
H31C31C32107.4°109.5°
H31AC31C32107.4°109.5°
C31C32H32101.5°110.4°
C31C32C33113.6°110.5°
C31C32C36113.6°110.5°
H32C32C33113.8°110.5°
H32C32C36113.7°110.6°
C33C32C36101.2°104.2°
C32C33H33111.2°111.0°
C32C33H33A111.2°111.0°
C32C33C34104.5°101.7°
C32C36N35109.0°110.1°
C32C36O37124.8°124.9°
H33C33H33A107.7°110.8°
H33C33C34111.2°111.0°
H33AC33C34111.2°111.0°
C33C34H34112.5°110.2°
C33C34N35100.9°105.5°
C33C34H34A112.4°110.2°
H34C34N35112.4°110.3°
H34C34H34A106.3°110.2°
N35C34H34A112.5°110.3°
C34N35C36113.3°111.3°
C34N35HN35123.4°124.4°
C36N35HN35123.3°124.3°
N35C36O37126.2°125.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
H01BC01C02H01120.0°120.0°
H01BC01C02H01A120.0°120.0°
H01BC01H01H01A120.0°119.9°
H01BC01C02O03180.0°180.0°
H01BC01C02H02A60.0°60.0°
H01BC01C02H0260.0°60.1°
C02C01H01H01A120.0°120.1°
C01C02O03H02A120.0°120.0°
C01C02O03H02120.0°119.9°
C01C02H02AH02118.7°120.0°
C01C02O03C04155.3°180.0°
H01C01C02O0360.0°60.0°
H01C01C02H02A60.0°180.0°
H01C01C02H02180.0°59.9°
H01AC01C02O0360.0°60.0°
H01AC01C02H02A180.0°59.9°
H01AC01C02H0260.0°180.0°
O03C02H02AH02118.7°120.0°
C02O03C04C05165.5°180.0°
C02O03C04O3813.5°0.0°
H02AC02O03C0484.7°60.0°
H02C02O03C0435.3°60.1°
O03C04C05O38149.7°180.0°
O03C04C05H05A1.1°60.0°
O03C04C05H05121.0°60.0°
O03C04C05C06118.9°180.0°
C04C05H05AH05116.4°120.0°
C04C05H05AC06127.2°120.0°
C04C05H05C06127.3°120.0°
C04C05C06H06165.2°60.0°
C04C05C06C0774.8°180.0°
C04C05C06H06A45.2°60.0°
O38C04C05H05A150.8°120.0°
O38C04C05H0589.2°120.0°
O38C04C05C0630.8°0.0°
H05AC05H05C06116.4°120.0°
H05AC05C06H0674.8°60.0°
H05AC05C06C0745.2°60.0°
H05AC05C06H06A165.2°180.0°
H05C05C06H0645.1°180.0°
H05C05C06C07165.2°60.0°
H05C05C06H06A74.8°60.0°
C05C06H06C07122.2°120.0°
C05C06H06H06A118.9°120.0°
C05C06C07H06A120.0°120.0°
C05C06C07N0874.5°65.0°
C05C06C07H0744.9°55.0°
C05C06C07C31161.7°175.0°
H06C06C07H06A120.0°120.0°
H06C06C07N0845.5°55.0°
H06C06C07H07164.9°175.0°
H06C06C07C3178.3°65.0°
C06C07N08H07118.2°119.9°
C06C07N08C31124.9°120.0°
C06C07H07C31121.1°120.0°
C06C07N08HN0852.1°28.2°
C06C07N08C09127.9°151.9°
C06C07C31H3163.1°174.0°
C06C07C31H31A56.9°54.1°
C06C07C31C32176.9°66.0°
H06AC06C07N08165.5°175.0°
H06AC06C07H0775.2°65.0°
H06AC06C07C3141.7°55.0°
N08C07H07C31119.9°120.1°
C07N08HN08C09180.0°180.0°
C07N08C09C10176.5°175.0°
C07N08C09O303.0°5.0°
N08C07C31H3159.8°54.0°
N08C07C31H31A179.8°65.9°
N08C07C31C3260.2°174.0°
H07C07N08HN08170.2°148.1°
H07C07N08C099.8°31.9°
H07C07C31H31179.0°66.0°
H07C07C31H31A61.0°174.0°
H07C07C31C3259.0°54.0°
C31C07N08HN0872.8°91.8°
C31C07N08C09107.2°88.1°
C07C31H31H31A117.4°120.0°
C07C31H31C32125.3°120.0°
C07C31H31AC32125.2°120.1°
C07C31C32H3255.2°51.0°
C07C31C32C3367.4°173.6°
C07C31C32C36177.7°71.6°
HN08N08C09C103.5°5.0°
HN08N08C09O30177.0°175.0°
N08C09C10O30179.5°180.0°
N08C09C10C2788.9°60.0°
N08C09C10H1028.4°60.0°
N08C09C10N11145.1°180.0°
C09C10C27H10118.6°120.0°
C09C10C27N11124.9°120.0°
C09C10H10N11119.8°120.0°
C09C10N11C25103.4°59.8°
C09C10N11C1275.4°120.0°
C09C10C27C28175.2°175.0°
C09C10C27H2764.8°65.0°
C09C10C27H27A55.2°55.1°
O30C09C10C2790.6°120.0°
O30C09C10H10152.1°120.0°
O30C09C10N1135.4°0.0°
C27C10H10N11121.0°120.0°
C27C10N11C2521.0°60.2°
C27C10N11C12160.2°120.0°
C10C27C28H27120.0°120.1°
C10C27C28H27A120.0°119.9°
C10C27H27H27A120.7°120.0°
C10C27C28C29163.4°120.0°
H10C10N11C25138.1°179.8°
H10C10N11C1243.2°0.0°
H10C10C27C2856.5°55.0°
H10C10C27H27176.5°175.0°
H10C10C27H27A63.4°64.9°
C10N11C25C12178.7°179.8°
C10N11C12O262.0°0.0°
C10N11C12C13176.4°179.9°
C10N11C25C24178.0°179.7°
C10N11C25H252.0°0.1°
N11C10C27C2860.0°65.0°
N11C10C27H2760.0°55.0°
N11C10C27H27A179.9°175.0°
C25N11C12O26176.8°179.8°
C25N11C12C134.8°0.2°
N11C25C24C231.4°0.5°
N11C25C24H25180.0°179.8°
N11C25C24H24178.6°179.8°
N11C12O26C13178.3°180.0°
N11C12C13C234.5°0.0°
N11C12C13N14173.0°180.0°
C12N11C25C243.3°0.5°
C12N11C25H25176.7°179.7°
O26C12C13C23177.2°180.0°
O26C12C13N145.3°0.1°
C12C13C23N14177.3°179.9°
C12C13N14C15127.8°58.9°
C12C13N14HN1452.2°121.0°
C12C13C23C242.6°0.0°
C12C13C23H23177.4°180.0°
C23C13N14C1549.6°121.1°
C23C13N14HN14130.5°58.9°
C13C23C24H23180.0°180.0°
C13C23C24C251.0°0.3°
C13C23C24H24179.0°180.0°
C13N14C15HN14180.0°180.0°
C13N14C15O229.6°4.8°
C13N14C15C16171.3°175.2°
N14C13C23C24174.6°180.0°
N14C13C23H235.3°0.0°
N14C15O22C16179.0°180.0°
N14C15C16C21179.0°180.0°
N14C15C16N170.2°0.3°
HN14N14C15O22170.4°175.2°
HN14N14C15C168.7°4.9°
O22C15C16C210.1°0.0°
O22C15C16N17178.9°179.7°
C15C16C21N17178.9°179.8°
C15C16N17O18179.2°180.0°
C15C16C21C19179.7°179.8°
C15C16C21H210.3°0.0°
C21C16N17O181.9°0.2°
C16C21C19O180.6°0.4°
C16C21C19H21180.0°179.9°
C16C21C19C20179.9°179.9°
C16N17O18C192.4°0.0°
N17C16C21C190.8°0.4°
N17C16C21H21179.3°179.7°
N17O18C19C211.9°0.3°
N17O18C19C20178.6°180.0°
O18C19C21C20179.5°179.7°
O18C19C20H20B0.0°120.0°
O18C19C20H20120.0°0.0°
O18C19C20H20A120.0°119.9°
O18C19C21H21179.3°179.7°
C21C19C20H20B179.4°60.3°
C21C19C20H2060.6°179.7°
C21C19C20H20A59.4°59.7°
C19C20H20BH20120.0°120.0°
C19C20H20BH20A120.0°120.0°
C19C20H20H20A120.0°120.0°
C20C19C21H210.2°0.0°
H20BC20H20H20A120.0°120.0°
C23C24C25H24180.0°179.7°
C23C24C25H25178.6°179.7°
H23C23C24C25179.0°179.8°
H23C23C24H241.0°0.0°
H24C24C25H251.4°0.1°
C28C27H27H27A120.6°120.0°
C27C28C29H29101.5°168.6°
H27C27C28C2976.6°0.0°
H27AC27C28C2943.4°120.0°
H31C31H31AC32117.4°120.0°
H31C31C32H3264.8°171.0°
H31C31C32C33172.6°66.4°
H31C31C32C3657.6°48.4°
H31AC31C32H32175.2°69.0°
H31AC31C32C3352.6°53.6°
H31AC31C32C3662.4°168.4°
C31C32H32C33122.4°122.6°
C31C32H32C36122.4°122.6°
C31C32C33C36122.1°118.7°
C31C32C33H3333.0°25.3°
C31C32C33H33A86.9°98.4°
C31C32C33C34153.0°143.5°
C31C32C36N35140.0°135.0°
C31C32C36O3742.9°45.1°
H32C32C33C36122.4°118.8°
H32C32C33H33148.4°147.8°
H32C32C33H33A28.5°24.1°
H32C32C33C3491.5°94.0°
H32C32C36N35104.6°102.5°
H32C32C36O3772.5°77.4°
C32C33H33H33A122.0°123.8°
C32C33H33C34116.0°112.4°
C32C33H33AC34116.0°112.4°
C32C33C34H34151.9°144.4°
C32C33C34N3531.9°25.4°
C32C33C34H34A88.1°93.6°
C33C32C36N3517.9°16.2°
C33C32C36O37165.0°163.8°
C36C32C33H3389.1°93.4°
C36C32C33H33A150.9°142.9°
C36C32C33C3430.9°24.8°
C32C36N35C342.5°0.4°
C32C36N35O37177.1°180.0°
C32C36N35HN35177.5°179.7°
H33C33H33AC34122.0°123.9°
H33C33C34H3431.9°26.3°
H33C33C34N3588.1°92.7°
H33C33C34H34A151.9°148.2°
H33AC33C34H3488.0°97.4°
H33AC33C34N35152.0°143.5°
H33AC33C34H34A32.0°24.5°
C33C34H34N35113.0°116.1°
C33C34H34H34A123.5°121.9°
C33C34N35H34A120.0°119.0°
C33C34N35C3622.3°17.0°
C33C34N35HN35157.7°163.0°
H34C34N35H34A120.0°122.0°
H34C34N35C36142.3°136.0°
H34C34N35HN3537.7°44.0°
C34N35C36HN35180.0°179.9°
C34N35C36O37174.6°179.5°
H34AC34N35C3697.7°102.0°
H34AC34N35HN3582.3°77.9°
HN35N35C36O375.4°0.4°

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon