Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

XMJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.33Å1.35Å
C1C5sing1.48Å1.50Å
C1H1sing1.08Å1.08Å
C2S4sing1.76Å1.73Å
C2H2sing1.08Å1.08Å
C3C5doub1.39Å1.48ÅAromatic
C3C15sing1.38Å1.43ÅAromatic
C3H3sing1.08Å1.08Å
S4O7doub1.42Å1.54Å
S4N11sing1.66Å1.75Å
S4O19doub1.42Å1.54Å
C5C12sing1.40Å1.47ÅAromatic
CL6C18sing1.74Å1.72Å
C8O9doub1.21Å1.24Å
C8C10sing1.50Å1.59Å
C8N16sing1.33Å1.44Å
C10N11sing1.47Å1.50Å
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
N11C14sing1.47Å1.49Å
C12C17doub1.38Å1.44ÅAromatic
C12H12sing1.08Å1.08Å
C13C14sing1.53Å1.56Å
C13N16sing1.46Å1.52Å
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C15C18doub1.38Å1.45ÅAromatic
C15H15sing1.08Å1.08Å
N16C20sing1.47Å1.48Å
C17C18sing1.38Å1.46ÅAromatic
C17H17sing1.08Å1.08Å
C20C28sing1.53Å1.55Å
C20H201sing1.09Å1.10Å
C20H202sing1.09Å1.10Å
C21C24doub1.38Å1.44ÅAromatic
C21N30sing1.32Å1.39ÅAromatic
C21H21sing1.08Å1.08Å
N22C23sing1.39Å1.47Å
N22C25sing1.47Å1.54Å
N22C27sing1.47Å1.54Å
C23C24sing1.39Å1.48ÅAromatic
C23C26doub1.39Å1.48ÅAromatic
C24H24sing1.08Å1.08Å
C25C29sing1.53Å1.57Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
C26C31sing1.38Å1.44ÅAromatic
C26H26sing1.08Å1.08Å
C27C32sing1.53Å1.58Å
C27H271sing1.09Å1.10Å
C27H272sing1.09Å1.10Å
C28C29sing1.53Å1.57Å
C28C32sing1.53Å1.57Å
C28H28sing1.09Å1.10Å
C29H291sing1.09Å1.10Å
C29H292sing1.09Å1.10Å
N30C31doub1.32Å1.39ÅAromatic
C31H31sing1.08Å1.08Å
C32H321sing1.09Å1.10Å
C32H322sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C5123.1°120.1°
C2C1H1118.4°120.0°
C1C2S4121.5°120.0°
C1C2H2119.3°120.0°
C5C1H1118.4°120.0°
C1C5C3122.3°120.2°
C1C5C12119.9°120.1°
S4C2H2119.2°120.0°
C2S4O7109.3°105.7°
C2S4N11112.2°107.4°
C2S4O19106.9°105.8°
C5C3C15120.9°119.9°
C5C3H3119.6°120.1°
C3C5C12117.9°119.7°
C15C3H3119.6°120.0°
C3C15C18120.6°120.1°
C3C15H15119.7°119.9°
O7S4N11109.7°105.8°
O7S4O19110.9°125.3°
N11S4O19107.8°105.8°
S4N11C10119.5°121.4°
S4N11C14119.1°121.3°
C5C12C17120.5°119.9°
C5C12H12119.7°120.1°
CL6C18C15119.5°119.9°
CL6C18C17120.8°119.9°
O9C8C10118.2°118.5°
O9C8N16124.7°118.4°
C10C8N16117.2°123.0°
C8C10N11118.4°109.1°
C8C10H101104.5°109.5°
C8C10H102106.6°109.6°
C8N16C13121.6°124.6°
C8N16C20121.2°117.7°
N11C10H101104.5°109.7°
N11C10H102106.6°109.3°
C10N11C14115.3°117.3°
H101C10H102116.8°109.7°
N11C14C13111.3°108.2°
N11C14H141108.5°109.7°
N11C14H142108.9°109.7°
C17C12H12119.8°120.1°
C12C17C18120.4°120.2°
C12C17H17119.8°120.0°
C14C13N16114.1°110.8°
C14C13H131106.9°109.2°
C14C13H132107.9°109.2°
C13C14H141108.5°109.7°
C13C14H142108.9°109.8°
N16C13H131106.9°109.2°
N16C13H132108.0°109.2°
C13N16C20117.2°117.7°
H131C13H132113.2°109.2°
H141C14H142110.9°109.7°
C18C15H15119.7°119.9°
C15C18C17119.7°120.2°
N16C20C28116.8°109.5°
N16C20H201105.4°109.4°
N16C20H202107.1°109.5°
C18C17H17119.8°119.9°
C28C20H201105.4°109.6°
C28C20H202107.1°109.5°
C20C28C29113.1°109.5°
C20C28C32112.0°109.6°
C20C28H28105.6°109.6°
H201C20H202115.4°109.5°
C24C21N30122.5°120.8°
C24C21H21118.7°119.6°
C21C24C23118.8°119.1°
C21C24H24120.6°120.4°
N30C21H21118.7°119.6°
C21N30C31119.7°121.9°
C23N22C25119.6°106.7°
C23N22C27120.9°106.7°
N22C23C24121.0°120.9°
N22C23C26121.6°120.9°
C25N22C27119.4°107.3°
N22C25C29118.6°109.8°
N22C25H251104.4°109.4°
N22C25H252106.6°109.4°
N22C27C32118.0°109.8°
N22C27H271104.7°109.4°
N22C27H272106.7°109.4°
C24C23C26117.4°118.3°
C23C24H24120.6°120.5°
C23C26C31118.9°119.1°
C23C26H26120.6°120.5°
C29C25H251104.4°109.4°
C29C25H252106.5°109.4°
C25C29C28113.7°109.2°
C25C29H291107.1°109.5°
C25C29H292108.1°109.5°
H251C25H252116.9°109.4°
C31C26H26120.5°120.5°
C26C31N30122.6°120.9°
C26C31H31118.7°119.6°
C32C27H271104.7°109.5°
C32C27H272106.7°109.4°
C27C32C28114.0°109.2°
C27C32H321106.9°109.5°
C27C32H322108.0°109.6°
H271C27H272116.4°109.4°
C29C28C32110.8°108.9°
C29C28H28106.9°109.5°
C28C29H291107.1°109.5°
C28C29H292108.1°109.5°
C32C28H28108.1°109.6°
C28C32H321106.9°109.5°
C28C32H322108.0°109.5°
H291C29H292112.8°109.6°
N30C31H31118.7°119.5°
H321C32H322113.1°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C5H1180.0°180.0°
C1C2S4H2180.0°180.0°
C2C1C5C356.8°180.0°
C1C2S4O771.5°127.4°
C1C2S4N1150.3°120.1°
C1C2S4O19168.3°7.4°
C2C1C5C12122.8°0.0°
C5C1C2S4173.8°180.0°
C5C1C2H26.2°0.0°
C1C5C3C12179.6°180.0°
C1C5C3C15179.9°180.0°
C1C5C3H30.1°0.0°
C1C5C12C17179.9°179.8°
C1C5C12H120.1°0.1°
H1C1C2S46.2°0.0°
H1C1C2H2173.8°180.0°
H1C1C5C3123.2°0.0°
H1C1C5C1257.2°180.0°
C2S4O7N11123.4°113.7°
C2S4O7O19117.6°123.1°
C2S4N11O19117.4°112.7°
C2S4N11C1089.6°90.3°
C2S4N11C1461.6°90.0°
H2C2S4O7108.5°52.6°
H2C2S4N11129.7°60.0°
H2C2S4O1911.7°172.6°
C5C3C15H3180.0°180.0°
C3C5C12C170.3°0.2°
C3C5C12H12179.7°179.9°
C5C3C15C180.1°0.1°
C5C3C15H15179.9°179.9°
C15C3C5C120.3°0.0°
C3C15C18CL6179.5°180.0°
C3C15C18H15180.0°179.9°
C3C15C18C170.2°0.3°
H3C3C5C12179.7°180.0°
H3C3C15C18179.9°180.0°
H3C3C15H150.1°0.1°
O7S4N11O19120.9°134.8°
O7S4N11C1032.1°157.1°
O7S4N11C14176.8°22.6°
S4N11C10C8180.0°137.3°
S4N11C10C14152.2°179.7°
S4N11C10H10164.3°17.3°
S4N11C10H10260.0°102.9°
S4N11C14C13155.4°118.5°
S4N11C14H14185.3°121.9°
S4N11C14H14235.4°1.2°
O19S4N11C10153.0°22.4°
O19S4N11C1455.8°157.4°
C5C12C17H12180.0°179.9°
C5C12C17C180.0°0.5°
C5C12C17H17180.0°180.0°
CL6C18C17C12179.4°179.8°
CL6C18C15C17179.7°179.7°
CL6C18C15H150.6°0.1°
CL6C18C17H170.6°0.3°
O9C8C10N16179.8°179.9°
O9C8C10N11179.5°167.4°
O9C8C10H10164.8°47.3°
O9C8C10H10259.4°73.0°
O9C8N16C13179.7°175.7°
O9C8N16C200.3°4.3°
C8C10N11H101115.8°120.0°
C8C10N11H102120.0°119.8°
C8C10H101H102117.4°120.3°
C8C10N11C1427.8°42.4°
C10C8N16C130.5°4.1°
C10C8N16C20179.5°175.8°
N16C8C10N110.4°12.4°
N16C8C10H101115.4°132.5°
N16C8C10H102120.4°107.2°
C8N16C13C1424.5°21.9°
C8N16C13C20179.9°180.0°
C8N16C13H131142.5°142.3°
C8N16C13H13295.5°98.5°
C8N16C20C2893.7°90.0°
C8N16C20H201149.7°30.0°
C8N16C20H20226.3°150.0°
N11C10H101H102117.5°120.0°
C10N11C14C1352.2°61.2°
C10N11C14H14167.0°58.4°
C10N11C14H142172.2°179.0°
H101C10N11C1488.0°162.4°
H102C10N11C14147.8°77.3°
N11C14C13H141119.2°119.6°
N11C14C13H142120.0°119.7°
N11C14C13N1650.6°46.7°
N11C14C13H131168.5°167.0°
N11C14C13H13269.4°73.6°
N11C14H141H142119.5°120.6°
C12C17C18C150.2°0.5°
C12C17C18H17180.0°179.5°
H12C12C17C18180.0°179.7°
H12C12C17H170.0°0.1°
C14C13N16H131118.0°120.4°
C14C13N16H132120.0°120.4°
C14C13H131H132118.7°119.4°
C13C14H141H142119.5°120.7°
C14C13N16C20155.5°158.1°
N16C13H131H132118.7°119.3°
N16C13C14H14168.6°72.9°
N16C13C14H142170.6°166.4°
C13N16C20C2886.2°90.0°
C13N16C20H20130.4°150.0°
C13N16C20H202153.8°30.0°
H131C13C14H14149.3°47.4°
H131C13C14H14271.5°73.3°
H131C13N16C2037.5°37.7°
H132C13C14H141171.3°166.7°
H132C13C14H14250.6°46.1°
H132C13N16C2084.6°81.6°
C15C18C17H17179.8°179.9°
H15C15C18C17179.8°179.8°
N16C20C28H201116.6°120.0°
N16C20C28H202120.0°120.0°
N16C20H201H202117.9°119.9°
N16C20C28C29149.3°180.0°
N16C20C28C3223.3°60.5°
N16C20C28H2894.2°59.8°
C28C20H201H202117.9°120.1°
C20C28C29C25179.5°175.5°
C20C28C32C27179.3°175.4°
C20C28C29C32126.7°119.9°
C20C28C29H28115.7°120.2°
C20C28C32H28115.9°120.3°
C20C28C29H29161.3°64.6°
C20C28C29H29260.5°55.6°
C20C28C32H32162.7°55.5°
C20C28C32H32259.3°64.6°
H201C20C28C2932.7°60.0°
H201C20C28C3293.3°179.5°
H201C20C28H28149.2°60.2°
H202C20C28C2990.7°60.0°
H202C20C28C32143.3°59.4°
H202C20C28H2825.8°179.8°
C24C21N30H21180.0°179.9°
C21C24C23N22179.8°180.0°
C21C24C23H24180.0°180.0°
C21C24C23C260.0°0.2°
C24C21N30C310.1°0.1°
N30C21C24C230.1°0.1°
N30C21C24H24179.9°179.9°
C21N30C31C260.1°0.3°
C21N30C31H31179.9°179.9°
H21C21C24C23179.9°180.0°
H21C21C24H240.1°0.0°
H21C21N30C31179.9°180.0°
C23N22C25C27179.8°114.1°
N22C23C24C26179.8°179.8°
N22C23C24H240.2°0.0°
C23N22C25C29168.1°179.7°
C23N22C25H25176.2°59.6°
C23N22C25H25248.1°60.2°
N22C23C26C31179.8°179.7°
N22C23C26H260.2°0.2°
C23N22C27C32168.8°179.7°
C23N22C27H27152.8°59.6°
C23N22C27H27271.2°60.2°
C25N22C23C240.3°180.0°
C25N22C23C26179.5°0.2°
N22C25C29H251115.7°120.1°
N22C25C29H252120.0°120.0°
N22C25H251H252117.4°119.8°
C25N22C27C3211.4°65.7°
C25N22C27H271127.4°54.5°
C25N22C27H272108.6°174.3°
N22C25C29C2833.7°61.4°
N22C25C29H291151.8°178.7°
N22C25C29H29286.3°58.5°
C27N22C23C24179.9°65.6°
C27N22C23C260.3°114.2°
C27N22C25C2912.1°65.6°
C27N22C25H251103.6°54.5°
C27N22C25H252132.1°174.3°
N22C27C32H271116.0°120.1°
N22C27C32H272120.0°120.1°
N22C27H271H272117.6°119.8°
N22C27C32C2832.6°61.4°
N22C27C32H32185.4°58.5°
N22C27C32H322152.6°178.7°
C24C23C26C310.0°0.5°
C24C23C26H26180.0°180.0°
C26C23C24H24180.0°179.8°
C23C26C31H26180.0°179.5°
C23C26C31N300.0°0.6°
C23C26C31H31180.0°179.8°
C29C25H251H252117.4°119.9°
C25C29C28H291118.2°119.9°
C25C29C28H292120.0°119.9°
C25C29C28C3253.8°55.6°
C25C29C28H2863.8°64.3°
C25C29H291H292118.8°120.1°
H251C25C29C2882.0°58.7°
H251C25C29H29136.1°61.2°
H251C25C29H292158.0°178.6°
H252C25C29C28153.7°178.6°
H252C25C29H29188.2°58.6°
H252C25C29H29233.7°61.5°
C26C31N30H31180.0°179.6°
H26C26C31N30180.0°180.0°
H26C26C31H310.0°0.3°
C32C27H271H272117.6°119.8°
C27C32C28C2953.4°55.6°
C27C32C28H321118.0°119.9°
C27C32C28H322120.0°119.9°
C27C32C28H2863.4°64.3°
C27C32H321H322118.7°120.2°
H271C27C32C28148.5°58.7°
H271C27C32H32130.6°178.6°
H271C27C32H32291.5°61.1°
H272C27C32C2887.5°178.5°
H272C27C32H321154.6°61.6°
H272C27C32H32232.5°58.7°
C29C28C32H28116.8°119.9°
C28C29H291H292118.8°120.2°
C29C28C32H32164.5°64.3°
C29C28C32H322173.4°175.5°
C32C28C29H291172.0°175.5°
C32C28C29H29266.2°64.3°
C28C32H321H322118.7°120.1°
H28C28C29H29154.4°55.6°
H28C28C29H292176.2°175.7°
H28C28C32H321178.6°175.8°
H28C28C32H32256.6°55.7°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon