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XKO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C10doub1.35Å1.35ÅAromatic
C9N6sing1.34Å1.39ÅAromatic
C10N1sing1.37Å1.40ÅAromatic
N6C6doub1.32Å1.33ÅAromatic
N1C6sing1.38Å1.40ÅAromatic
N1C2sing1.37Å1.41ÅAromatic
C6C5sing1.46Å1.41ÅAromatic
N2C2sing1.38Å1.34Å
N2C1sing1.46Å1.44Å
C2N3doub1.31Å1.32ÅAromatic
C5N7sing1.35Å1.39ÅAromatic
C5C4doub1.40Å1.40ÅAromatic
N3C4sing1.34Å1.35ÅAromatic
N7C8doub1.30Å1.32ÅAromatic
C4N9sing1.37Å1.38ÅAromatic
C8N9sing1.36Å1.40ÅAromatic
N9C16sing1.47Å1.48Å
C16C2'sing1.55Å1.55Å
C16O4'sing1.44Å1.41Å
O2'C2'sing1.43Å1.42Å
C2'C3'sing1.55Å1.53Å
O4'C4'sing1.44Å1.44Å
C3'C4'sing1.54Å1.54Å
C3'O3'sing1.43Å1.43Å
C4'C5'sing1.53Å1.49Å
C5'O5'sing1.43Å1.44Å
O5'S1sing1.52Å1.59Å
C26C25doub1.37Å1.38ÅAromatic
C26C27sing1.39Å1.40ÅAromatic
O2S1doub1.42Å1.44Å
O24C7doub1.21Å1.20Å
C25C14sing1.40Å1.40ÅAromatic
C27C28doub1.38Å1.38ÅAromatic
C7C11sing1.51Å1.51Å
C7N4sing1.35Å1.34Å
C11C12sing1.53Å1.52Å
S1N4sing1.66Å1.69Å
S1O3doub1.42Å1.41Å
C14C15doub1.41Å1.42ÅAromatic
C14C13sing1.47Å1.45ÅAromatic
C28C15sing1.39Å1.40ÅAromatic
C12C13sing1.51Å1.50Å
C15N16sing1.38Å1.37ÅAromatic
C13C17doub1.34Å1.36ÅAromatic
N16C17sing1.37Å1.37ÅAromatic
C5'H1sing1.09Å1.10Å
C5'H2sing1.09Å1.10Å
C4'H3sing1.09Å1.10Å
C3'H4sing1.09Å1.10Å
O3'H5sing0.97Å0.95Å
C2'H6sing1.09Å1.10Å
O2'H7sing0.97Å0.95Å
C8H8sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
N2H11sing0.97Å1.00Å
N4H12sing0.97Å1.00Å
C11H13sing1.09Å1.10Å
C11H14sing1.09Å1.10Å
C12H15sing1.09Å1.10Å
C12H16sing1.09Å1.10Å
N16H17sing0.97Å1.00Å
C17H18sing1.08Å1.08Å
C25H19sing1.08Å1.08Å
C26H20sing1.08Å1.08Å
C27H21sing1.08Å1.08Å
C28H22sing1.08Å1.08Å
C16H23sing1.09Å1.10Å
C1H24sing1.09Å1.10Å
C1H25sing1.09Å1.10Å
C1H26sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C10C9N6112.5°108.7°
C9C10N1105.8°107.1°
C10C9H9123.8°125.6°
C9C10H10127.1°126.4°
C9N6C6104.4°109.3°
N6C9H9123.7°125.7°
C10N1C6106.0°106.7°
C10N1C2131.4°133.5°
N1C10H10127.1°126.4°
N6C6N1111.3°108.2°
N6C6C5133.2°134.1°
C6N1C2122.6°119.8°
N1C6C5115.6°117.7°
N1C2N2119.4°118.8°
N1C2N3121.3°122.3°
C6C5N7132.2°134.6°
C6C5C4117.4°118.0°
C2N2C1123.0°120.0°
N2C2N3119.3°118.8°
C2N2H11106.0°120.0°
C1N2H11106.0°120.0°
N2C1H24109.5°109.5°
N2C1H25109.5°109.5°
N2C1H26109.5°109.5°
C2N3C4116.8°122.3°
N7C5C4110.4°107.4°
C5N7C8104.4°109.4°
C5C4N3126.4°119.8°
C5C4N9106.5°106.0°
N3C4N9127.1°134.2°
N7C8N9113.4°109.7°
N7C8H8123.3°125.2°
C4N9C8105.3°107.5°
C4N9C16129.3°126.3°
C8N9C16124.9°126.3°
N9C8H8123.3°125.1°
N9C16C2'111.2°110.6°
N9C16O4'110.0°110.6°
N9C16H23110.0°110.6°
C2'C16O4'105.4°103.5°
C16C2'O2'112.0°110.9°
C16C2'C3'103.5°102.0°
C16C2'H6108.3°110.9°
C2'C16H23109.1°110.7°
C16O4'C4'106.5°106.9°
O4'C16H23111.1°110.7°
O2'C2'C3'114.3°110.9°
O2'C2'H6110.0°110.8°
C2'O2'H7109.5°114.0°
C2'C3'C4'103.6°104.2°
C2'C3'O3'114.4°110.5°
C2'C3'H4108.9°110.6°
C3'C2'H6108.5°111.0°
O4'C4'C3'108.3°107.4°
O4'C4'C5'104.9°109.9°
O4'C4'H3110.1°109.9°
C4'C3'O3'110.6°110.5°
C3'C4'C5'115.6°109.9°
C3'C4'H3108.7°109.9°
C4'C3'H4108.8°110.5°
O3'C3'H4110.3°110.4°
C3'O3'H5109.5°114.0°
C4'C5'O5'108.4°109.4°
C4'C5'H1109.7°109.4°
C4'C5'H2109.7°109.5°
C5'C4'H3109.3°109.9°
C5'O5'S1116.4°114.0°
O5'C5'H1109.7°109.5°
O5'C5'H2109.8°109.5°
O5'S1O2107.5°106.4°
O5'S1N4103.6°107.2°
O5'S1O3107.5°106.4°
C25C26C27121.2°120.5°
C26C25C14119.1°119.8°
C26C25H19120.4°120.1°
C25C26H20119.4°119.8°
C26C27C28121.5°120.6°
C27C26H20119.4°119.7°
C26C27H21119.3°119.7°
O2S1N4103.4°106.4°
O2S1O3119.1°123.2°
O24C7C11120.4°120.0°
O24C7N4123.8°120.0°
C25C14C15118.6°119.9°
C25C14C13134.6°134.0°
C14C25H19120.5°120.1°
C27C28C15117.4°119.8°
C28C27H21119.2°119.7°
C27C28H22121.3°120.1°
C11C7N4115.8°120.0°
C7C11C12108.6°109.5°
C7C11H13109.7°109.5°
C7C11H14109.7°109.5°
C7N4S1134.7°120.0°
C7N4H12112.7°120.0°
C11C12C13115.0°109.5°
C12C11H13109.7°109.5°
C12C11H14109.7°109.4°
C11C12H15108.1°109.5°
C11C12H16108.1°109.4°
N4S1O3114.5°106.4°
S1N4H12112.6°119.9°
C15C14C13106.8°106.0°
C14C15C28122.2°119.3°
C14C15N16107.4°107.2°
C14C13C12126.5°126.5°
C14C13C17106.0°107.0°
C28C15N16130.3°133.5°
C15C28H22121.3°120.1°
C12C13C17127.4°126.5°
C13C12H15108.1°109.5°
C13C12H16108.1°109.5°
C15N16C17109.1°109.9°
C15N16H17125.5°125.1°
C13C17N16110.6°109.9°
C13C17H18124.7°125.0°
C17N16H17125.4°125.0°
N16C17H18124.7°125.1°
H1C5'H2109.5°109.5°
H13C11H14109.4°109.4°
H15C12H16109.5°109.5°
H24C1H25109.4°109.4°
H24C1H26109.5°109.4°
H25C1H26109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C10C9N6H9180.0°179.9°
C9C10N1H10180.0°179.9°
C10C9N6C60.0°0.1°
C9C10N1C60.6°0.0°
C9C10N1C2179.5°180.0°
N6C9C10N10.4°0.0°
C9N6C6N10.3°0.1°
C9N6C6C5178.8°180.0°
N6C9C10H10179.6°180.0°
C10N1C6N60.6°0.0°
C10N1C6C2179.0°180.0°
C10N1C6C5178.7°180.0°
C10N1C2N21.2°0.0°
C10N1C2N3179.0°180.0°
N1C10C9H9179.6°180.0°
N6C6N1C5179.3°180.0°
N6C6N1C2179.6°180.0°
N6C6C5N72.5°0.0°
N6C6C5C4179.7°179.8°
C6N6C9H9180.0°180.0°
C6N1C2N2179.9°180.0°
C6N1C2N30.2°0.0°
N1C6C5N7178.4°179.9°
N1C6C5C41.2°0.3°
C6N1C10H10179.5°179.9°
C2N1C6C50.3°0.0°
N1C2N2N3179.9°180.0°
N1C2N2C1177.1°180.0°
N1C2N3C40.2°0.3°
C2N1C10H100.5°0.1°
N1C2N2H1161.0°0.0°
C6C5N7C4177.4°179.8°
C6C5C4N31.7°0.6°
C6C5N7C8177.8°179.9°
C6C5C4N9177.5°179.8°
C2N2C1H11121.9°180.0°
N2C2N3C4179.7°179.7°
C2N2C1H24180.0°60.0°
C2N2C1H2560.0°60.0°
C2N2C1H2660.0°179.9°
C1N2C2N33.0°0.0°
N2C1H24H25120.0°120.1°
N2C1H24H26120.0°120.0°
N2C1H25H26120.0°120.0°
C2N3C4C51.2°0.6°
C2N3C4N9177.9°179.6°
N3C2N2H11118.9°180.0°
N7C5C4N3179.6°179.6°
N7C5C4N90.3°0.4°
C5N7C8N91.1°0.0°
C5N7C8H8178.9°180.0°
C5C4N3N9179.1°179.0°
C4C5N7C80.4°0.2°
C5C4N9C80.9°0.4°
C5C4N9C16173.5°179.9°
N3C4N9C8179.9°179.4°
N3C4N9C167.3°0.8°
N7C8N9C41.3°0.2°
N7C8N9H8180.0°180.0°
N7C8N9C16174.3°179.9°
C4N9C8C16173.0°179.7°
C4N9C16C2'125.3°84.7°
C4N9C16O4'118.4°161.2°
C4N9C8H8178.7°179.8°
C4N9C16H234.3°38.3°
C8N9C16C2'46.0°95.0°
C8N9C16O4'70.3°19.1°
C8N9C16H23167.0°142.1°
N9C16C2'O4'119.2°118.5°
N9C16C2'H23121.5°122.9°
N9C16O4'H23122.0°122.9°
N9C16C2'O2'85.5°86.3°
N9C16C2'C3'151.0°155.5°
N9C16O4'C4'156.7°158.5°
N9C16C2'H636.0°37.3°
C16N9C8H85.7°0.0°
C2'C16O4'H23118.0°118.6°
C16C2'O2'C3'117.2°112.7°
C16C2'O2'H6120.4°123.6°
C16C2'C3'H6114.8°118.2°
C2'C16O4'C4'36.7°40.0°
C16C2'C3'C4'14.7°20.9°
C16C2'C3'O3'105.7°97.8°
C16C2'C3'H4130.4°139.6°
C16C2'O2'H7180.0°174.1°
O4'C16C2'O2'155.4°155.2°
O4'C16C2'C3'31.8°37.0°
C16O4'C4'C3'27.3°26.5°
C16O4'C4'C5'151.2°145.9°
C16O4'C4'H391.3°93.1°
O4'C16C2'H683.2°81.3°
O2'C2'C3'H6123.2°123.6°
O2'C2'C3'C4'136.7°139.1°
O2'C2'C3'O3'16.3°20.4°
O2'C2'C3'H4107.7°102.1°
O2'C2'C16H2336.0°36.6°
C2'C3'C4'O4'6.3°2.0°
C2'C3'C4'O3'123.0°118.7°
C2'C3'C4'H4115.8°118.8°
C2'C3'O3'H4123.2°122.6°
C2'C3'C4'C5'123.5°121.5°
C2'C3'C4'H3113.2°117.6°
C2'C3'O3'H5180.0°65.2°
C3'C2'O2'H762.8°61.4°
C3'C2'C16H2387.5°81.6°
O4'C4'C3'C5'117.2°119.5°
O4'C4'C3'H3119.5°119.5°
O4'C4'C3'O3'129.3°120.6°
O4'C4'C5'H3118.0°121.0°
O4'C4'C5'O5'179.1°66.7°
O4'C4'C5'H159.3°53.3°
O4'C4'C5'H261.0°173.3°
O4'C4'C3'H4109.4°116.8°
C4'O4'C16H2381.3°78.6°
C4'C3'O3'H4120.3°122.6°
C3'C4'C5'H3122.9°121.0°
C3'C4'C5'O5'60.0°175.3°
C3'C4'C5'H159.8°64.7°
C3'C4'C5'H2179.9°55.3°
C4'C3'O3'H563.6°180.0°
C4'C3'C2'H6100.1°97.3°
O3'C3'C4'C5'113.5°119.9°
O3'C3'C4'H39.8°1.1°
O3'C3'C2'H6139.5°144.0°
C4'C5'O5'H1119.8°119.9°
C4'C5'O5'H2119.8°120.0°
C4'C5'O5'S1162.5°180.0°
C4'C5'H1H2120.5°120.0°
C5'C4'C3'H47.8°2.7°
C5'O5'S1O211.1°171.5°
C5'O5'S1N498.0°75.0°
C5'O5'S1O3140.5°38.5°
O5'C5'H1H2120.5°120.0°
O5'C5'C4'H362.9°54.3°
O5'S1O2N4109.2°114.0°
O5'S1O2O3122.5°123.0°
O5'S1N4C726.6°65.0°
O5'S1N4O3116.8°113.5°
S1O5'C5'H142.7°60.1°
S1O5'C5'H277.6°60.0°
O5'S1N4H12153.4°115.0°
C25C26C27H20180.0°179.9°
C26C25C14H19180.0°179.9°
C25C26C27C280.2°0.1°
C26C25C14C150.1°0.0°
C26C25C14C13179.1°180.0°
C25C26C27H21179.9°180.0°
C27C26C25C140.0°0.1°
C26C27C28H21180.0°179.9°
C26C27C28C150.1°0.0°
C27C26C25H19180.0°180.0°
C26C27C28H22179.9°179.9°
O2S1N4C7138.6°48.5°
O2S1N4O3131.2°133.0°
O2S1N4H1241.4°131.5°
O24C7C11N4178.9°179.9°
O24C7C11C1275.1°0.1°
O24C7N4S12.8°0.0°
O24C7N4H12177.2°180.0°
O24C7C11H1344.7°120.0°
O24C7C11H14165.0°120.0°
C25C14C15C13179.5°180.0°
C25C14C15C280.2°0.0°
C25C14C13C122.9°0.1°
C25C14C15N16179.9°180.0°
C25C14C13C17179.7°179.7°
C14C25C26H20180.0°180.0°
C27C28C15C140.1°0.0°
C27C28C15H22180.0°179.9°
C27C28C15N16179.9°180.0°
C28C27C26H20179.8°180.0°
C7C11C12H13119.9°120.1°
C7C11C12H14119.9°120.0°
C11C7N4S1176.1°180.0°
C7C11C12C13173.7°180.0°
C11C7N4H123.9°0.1°
C7C11H13H14120.4°120.0°
C7C11C12H1565.5°59.9°
C7C11C12H1652.9°60.1°
N4C7C11C12103.8°180.0°
C7N4S1H12180.0°180.0°
C7N4S1O390.2°178.5°
N4C7C11H13136.4°59.9°
N4C7C11H1416.1°60.1°
C11C12C13C1460.0°85.4°
C11C12C13H15120.8°120.1°
C11C12C13H16120.8°120.0°
C11C12C13C17123.8°95.0°
C12C11H13H14120.4°119.9°
C11C12H15H16117.5°120.0°
O3S1N4H1289.8°1.5°
C14C15C28N16179.9°179.9°
C15C14C13C12177.7°179.9°
C15C14C13C170.9°0.3°
C14C15N16C170.1°0.2°
C14C15N16H17179.9°180.0°
C15C14C25H19179.8°180.0°
C14C15C28H22179.9°180.0°
C13C14C15C28179.3°180.0°
C14C13C12C17176.1°179.6°
C13C14C15N160.6°0.0°
C14C13C17N160.9°0.4°
C14C13C12H15179.2°34.7°
C14C13C12H1660.8°154.7°
C14C13C17H18179.1°179.7°
C13C14C25H190.9°0.0°
C28C15N16C17179.8°179.7°
C28C15N16H170.2°0.0°
C15C28C27H21179.9°179.9°
C12C13C17N16177.7°179.9°
C13C12C11H1353.8°59.9°
C13C12C11H1466.5°60.0°
C13C12H15H16117.5°120.0°
C12C13C17H182.3°0.1°
C15N16C17C130.5°0.4°
C15N16C17H17180.0°179.8°
C15N16C17H18179.4°179.7°
N16C15C28H220.1°0.1°
C13C17N16H18180.0°179.8°
C17C13C12H153.0°144.9°
C17C13C12H16115.4°24.9°
C13C17N16H17179.5°179.8°
H1C5'C4'H3177.2°174.3°
H2C5'C4'H356.9°65.7°
H3C4'C3'H4131.1°123.7°
H4C3'O3'H556.8°57.4°
H4C3'C2'H615.5°21.4°
H6C2'O2'H759.6°62.3°
H6C2'C16H23157.5°160.2°
H9C9C10H100.4°0.1°
H11N2C1H2458.1°120.0°
H11N2C1H25178.1°120.0°
H11N2C1H2661.9°0.0°
H13C11C12H15174.6°180.0°
H13C11C12H1667.0°60.0°
H14C11C12H1554.3°60.0°
H14C11C12H16172.7°180.0°
H17N16C17H180.5°0.0°
H19C25C26H200.0°0.1°
H20C26C27H210.1°0.1°
H21C27C28H220.1°0.0°
H24C1H25H26120.0°119.9°

222415

PDB entries from 2024-07-10

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