Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

XJL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
COdoub1.21Å1.22Å
O1Csing1.35Å1.31Å
C1Csing1.48Å1.49Å
C1C2sing1.40Å1.39ÅAromatic
C2C3doub1.38Å1.38ÅAromatic
C4C1doub1.40Å1.39ÅAromatic
C5C4sing1.38Å1.38ÅAromatic
C6C5doub1.39Å1.39ÅAromatic
C3C6sing1.39Å1.39ÅAromatic
NC6sing1.40Å1.43Å
NC7sing1.37Å1.37ÅAromatic
C8C7sing1.48Å1.48Å
C8C9doub1.40Å1.39ÅAromatic
C9C10sing1.38Å1.38ÅAromatic
C10C11doub1.39Å1.40ÅAromatic
N1C11sing1.40Å1.38Å
C11C12sing1.39Å1.40ÅAromatic
C12C13doub1.38Å1.38ÅAromatic
C13C8sing1.40Å1.39ÅAromatic
C7C14doub1.37Å1.38ÅAromatic
C14C15sing1.40Å1.39ÅAromatic
C15N2doub1.31Å1.33ÅAromatic
N2Nsing1.40Å1.38ÅAromatic
C2H1sing1.08Å1.08Å
N1H8sing0.97Å1.00Å
N1H7sing0.97Å1.00Å
C4H3sing1.08Å1.08Å
C5H4sing1.08Å1.08Å
C14H11sing1.08Å1.08Å
C10H6sing1.08Å1.08Å
C15H12sing1.08Å1.08Å
C13H10sing1.08Å1.08Å
C9H5sing1.08Å1.08Å
C3H2sing1.08Å1.08Å
C12H9sing1.08Å1.08Å
O1Hsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCO1123.6°120.0°
OCC1121.5°120.0°
O1CC1114.9°119.9°
CO1H109.5°117.0°
CC1C2120.6°120.1°
CC1C4120.7°120.1°
C1C2C3120.8°119.9°
C2C1C4118.7°119.8°
C1C2H1119.6°120.1°
C2C3C6120.1°120.1°
C3C2H1119.6°120.0°
C2C3H2120.0°120.0°
C1C4C5120.8°120.0°
C1C4H3119.6°120.0°
C4C5C6120.1°120.0°
C5C4H3119.6°120.0°
C4C5H4120.0°120.0°
C5C6C3119.6°120.2°
C5C6N120.0°119.9°
C6C5H4120.0°120.0°
C3C6N120.4°119.9°
C6C3H2120.0°120.0°
C6NC7130.1°126.2°
C6NN2118.3°126.2°
NC7C8125.8°126.3°
NC7C14106.2°107.3°
C7NN2111.6°107.7°
C7C8C9120.6°120.0°
C7C8C13120.7°120.0°
C8C7C14128.0°126.4°
C8C9C10120.8°119.9°
C9C8C13118.7°119.9°
C8C9H5119.6°120.1°
C9C10C11120.7°120.1°
C9C10H6119.6°120.0°
C10C9H5119.6°120.0°
C10C11N1120.8°120.0°
C10C11C12118.3°120.1°
C11C10H6119.6°119.9°
N1C11C12120.8°119.9°
C11N1H8109.5°120.0°
C11N1H7109.4°120.0°
C11C12C13120.7°120.1°
C11C12H9119.6°120.0°
C12C13C8120.8°119.9°
C12C13H10119.6°120.0°
C13C12H9119.7°120.0°
C8C13H10119.6°120.1°
C7C14C15105.3°107.9°
C7C14H11127.4°126.0°
C14C15N2112.8°108.6°
C15C14H11127.4°126.1°
C14C15H12123.6°125.7°
C15N2N104.1°108.6°
N2C15H12123.6°125.7°
H8N1H7109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCO1C1179.7°180.0°
OCC1C22.0°180.0°
OCC1C4177.4°0.0°
OCO1H0.0°0.0°
O1CC1C2178.3°0.0°
O1CC1C42.3°180.0°
CC1C2C4179.4°180.0°
CC1C2C3179.3°179.9°
CC1C4C5179.2°179.4°
CC1C2H10.7°0.3°
CC1C4H30.8°0.0°
C1CO1H179.7°180.0°
C1C2C3H1180.0°179.8°
C2C1C4C50.2°0.6°
C1C2C3C60.1°0.2°
C2C1C4H3179.8°180.0°
C1C2C3H2179.9°179.7°
C3C2C1C40.1°0.0°
C2C3C6C50.2°0.0°
C2C3C6H2180.0°179.9°
C2C3C6N179.5°180.0°
C1C4C5H3180.0°179.4°
C1C4C5C60.2°0.9°
C4C1C2H1179.9°179.7°
C1C4C5H4179.9°180.0°
C4C5C6H4180.0°179.1°
C4C5C6C30.0°0.6°
C4C5C6N179.4°179.4°
C5C6C3N179.4°180.0°
C5C6NC7139.4°134.5°
C5C6NN239.7°45.4°
C6C5C4H3179.9°179.7°
C5C6C3H2179.9°180.0°
C3C6NC741.2°45.4°
C3C6NN2139.7°134.6°
C6C3C2H1179.9°180.0°
C3C6C5H4180.0°179.7°
C6NC7N2179.1°180.0°
C6NC7C80.2°0.1°
C6NC7C14179.1°180.0°
C6NN2C15179.1°180.0°
NC6C5H40.6°0.3°
NC6C3H20.5°0.1°
NC7C8C14179.1°179.9°
NC7C8C960.6°154.4°
NC7C8C13120.4°26.2°
NC7C14C150.1°0.0°
C7NN2C150.1°0.1°
NC7C14H11179.9°179.9°
C7C8C9C13179.0°179.4°
C7C8C9C10178.9°180.0°
C7C8C13C12178.7°179.8°
C8C7C14C15179.2°179.9°
C8C7NN2179.3°179.9°
C8C7C14H110.8°0.0°
C7C8C13H101.3°0.1°
C7C8C9H51.1°0.1°
C8C9C10H5180.0°180.0°
C8C9C10C110.2°0.0°
C9C8C13C120.4°0.8°
C9C8C7C14118.5°25.5°
C8C9C10H6179.8°179.7°
C9C8C13H10179.7°179.5°
C9C10C11H6180.0°179.7°
C9C10C11N1179.2°179.8°
C9C10C11C120.4°0.3°
C10C9C8C130.2°0.5°
C10C11N1C12179.6°179.9°
C10C11C12C130.2°0.1°
C10C11N1H8180.0°0.1°
C10C11N1H760.0°180.0°
C11C10C9H5179.8°180.0°
C10C11C12H9179.8°180.0°
N1C11C12C13179.4°180.0°
C11N1H8H7120.0°179.9°
N1C11C10H60.8°0.1°
N1C11C12H90.6°0.1°
C11C12C13H9180.0°179.9°
C11C12C13C80.2°0.5°
C12C11N1H80.5°180.0°
C12C11N1H7119.6°0.1°
C12C11C10H6179.6°180.0°
C11C12C13H10179.8°179.8°
C12C13C8H10180.0°179.7°
C13C8C7C1460.6°154.0°
C13C8C9H5179.8°179.5°
C8C13C12H9179.9°179.5°
C7C14C15H11180.0°179.9°
C7C14C15N20.1°0.0°
C14C7NN20.0°0.1°
C7C14C15H12179.9°180.0°
C14C15N2H12180.0°179.9°
C14C15N2N0.2°0.1°
N2C15C14H11179.8°180.0°
NN2C15H12179.8°180.0°
H1C2C3H20.1°0.1°
H3C4C5H40.1°0.6°
H11C14C15H120.2°0.1°
H6C10C9H50.2°0.2°
H10C13C12H90.1°0.3°

250835

PDB entries from 2026-03-18

PDB statisticsPDBj update infoContact PDBjnumon