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XJD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NC12sing1.47Å1.45Å
C12C11sing1.53Å1.53Å
C11O5sing1.43Å1.40Å
O5Psing1.61Å1.64Å
O3Pdoub1.48Å1.50Å
PO4sing1.61Å1.50Å
PO2sing1.61Å1.64Å
O2C10sing1.43Å1.40Å
C10C9sing1.53Å1.53Å
C8C9sing1.53Å1.53Å
C8O1sing1.45Å1.40Å
C9O6sing1.45Å1.40Å
O1C7sing1.34Å1.39Å
O6C13sing1.34Å1.40Å
O7C13doub1.21Å1.18Å
OC7doub1.21Å1.18Å
C7C6sing1.51Å1.52Å
C13C14sing1.51Å1.53Å
C6C5sing1.53Å1.52Å
C14C15sing1.53Å1.53Å
C15C16sing1.53Å1.52Å
C5C4sing1.53Å1.52Å
C16C17sing1.53Å1.53Å
C4C3sing1.53Å1.52Å
C17C18sing1.53Å1.53Å
C18C19sing1.53Å1.53Å
C3C2sing1.53Å1.52Å
C20C19sing1.53Å1.53Å
C20C21sing1.53Å1.53Å
C21C22sing1.53Å1.53Å
C22C23sing1.53Å1.53Å
C2C1sing1.53Å1.52Å
C23C24sing1.53Å1.52Å
C24C25sing1.53Å1.52Å
C11H1sing1.09Å1.10Å
C11H2sing1.09Å1.10Å
C12H3sing1.09Å1.10Å
C12H4sing1.09Å1.10Å
C14H5sing1.09Å1.10Å
C14H6sing1.09Å1.10Å
C15H7sing1.09Å1.10Å
C15H8sing1.09Å1.10Å
C16H9sing1.09Å1.10Å
C16H10sing1.09Å1.10Å
C17H11sing1.09Å1.10Å
C17H12sing1.09Å1.10Å
C18H13sing1.09Å1.10Å
C18H14sing1.09Å1.10Å
C19H15sing1.09Å1.10Å
C19H16sing1.09Å1.10Å
C20H17sing1.09Å1.10Å
C20H18sing1.09Å1.10Å
C21H19sing1.09Å1.10Å
C21H20sing1.09Å1.10Å
C22H21sing1.09Å1.10Å
C22H22sing1.09Å1.10Å
C23H23sing1.09Å1.10Å
C23H24sing1.09Å1.10Å
C25H25sing1.09Å1.10Å
C25H26sing1.09Å1.10Å
C25H27sing1.09Å1.10Å
NH28sing1.01Å1.00Å
NH29sing1.01Å1.00Å
C1H31sing1.09Å1.10Å
C1H32sing1.09Å1.10Å
C1H33sing1.09Å1.10Å
C10H34sing1.09Å1.10Å
C10H35sing1.09Å1.10Å
C2H36sing1.09Å1.10Å
C2H37sing1.09Å1.10Å
C24H38sing1.09Å1.10Å
C24H39sing1.09Å1.10Å
C3H40sing1.09Å1.10Å
C3H41sing1.09Å1.10Å
C4H42sing1.09Å1.10Å
C4H43sing1.09Å1.10Å
C5H44sing1.09Å1.10Å
C5H45sing1.09Å1.10Å
C6H46sing1.09Å1.10Å
C6H47sing1.09Å1.10Å
C8H48sing1.09Å1.10Å
C8H49sing1.09Å1.10Å
C9H50sing1.09Å1.10Å
O4H51sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NC12C11110.9°109.5°
NC12H3109.1°109.5°
NC12H4109.1°109.4°
C12NH28109.5°111.0°
C12NH29109.4°111.0°
C12C11O5109.5°109.5°
C12C11H1109.5°109.5°
C12C11H2109.5°109.5°
C11C12H3109.1°109.5°
C11C12H4109.1°109.5°
C11O5P118.0°123.0°
O5C11H1109.5°109.5°
O5C11H2109.5°109.5°
O5PO3108.6°109.4°
O5PO4108.0°109.5°
O5PO2110.9°109.5°
O3PO4111.2°109.5°
O3PO2109.1°109.5°
O4PO2109.1°109.5°
PO4H51109.5°113.9°
PO2C10118.4°123.0°
O2C10C9109.3°109.5°
O2C10H34109.5°109.5°
O2C10H35109.5°109.4°
C10C9C8111.4°109.5°
C10C9O6109.9°109.5°
C9C10H34109.5°109.5°
C9C10H35109.5°109.4°
C10C9H50108.4°109.5°
C9C8O1108.0°109.4°
C8C9O6108.7°109.5°
C9C8H48109.8°109.5°
C9C8H49109.8°109.5°
C8C9H50108.3°109.4°
C8O1C7113.8°117.0°
O1C8H48109.8°109.5°
O1C8H49109.9°109.5°
C9O6C13113.8°117.0°
O6C9H50110.2°109.5°
O1C7O119.7°120.0°
O1C7C6120.3°120.0°
O6C13O7119.4°120.0°
O6C13C14120.8°120.0°
O7C13C14119.8°120.0°
OC7C6120.0°120.0°
C7C6C5111.2°109.5°
C7C6H46109.1°109.4°
C7C6H47109.1°109.5°
C13C14C15112.1°109.5°
C13C14H5108.8°109.5°
C13C14H6108.8°109.5°
C6C5C4112.4°109.5°
C6C5H44108.7°109.4°
C6C5H45108.7°109.5°
C5C6H46109.0°109.5°
C5C6H47109.0°109.5°
C14C15C16111.5°109.5°
C15C14H5108.8°109.5°
C15C14H6108.8°109.4°
C14C15H7109.0°109.5°
C14C15H8108.9°109.5°
C15C16C17113.8°109.5°
C16C15H7108.9°109.4°
C16C15H8109.0°109.5°
C15C16H9108.3°109.4°
C15C16H10108.4°109.5°
C5C4C3113.4°109.5°
C5C4H42108.5°109.5°
C5C4H43108.5°109.4°
C4C5H44108.8°109.5°
C4C5H45108.7°109.5°
C16C17C18111.5°109.5°
C17C16H9108.4°109.5°
C17C16H10108.4°109.5°
C16C17H11109.0°109.5°
C16C17H12108.9°109.5°
C4C3C2112.4°109.4°
C4C3H40108.7°109.4°
C4C3H41108.7°109.5°
C3C4H42108.5°109.5°
C3C4H43108.5°109.5°
C17C18C19113.7°109.5°
C18C17H11109.0°109.5°
C18C17H12109.0°109.4°
C17C18H13108.4°109.5°
C17C18H14108.4°109.5°
C18C19C20113.1°109.5°
C19C18H13108.4°109.5°
C19C18H14108.4°109.4°
C18C19H15108.5°109.5°
C18C19H16108.6°109.5°
C3C2C1112.2°109.5°
C3C2H36108.8°109.5°
C3C2H37108.7°109.5°
C2C3H40108.8°109.5°
C2C3H41108.7°109.4°
C19C20C21113.0°109.5°
C20C19H15108.6°109.5°
C20C19H16108.5°109.4°
C19C20H17108.6°109.5°
C19C20H18108.6°109.5°
C20C21C22114.9°109.5°
C21C20H17108.6°109.5°
C21C20H18108.6°109.4°
C20C21H19108.1°109.4°
C20C21H20108.1°109.5°
C21C22C23112.5°109.5°
C22C21H19108.1°109.5°
C22C21H20108.1°109.5°
C21C22H21108.7°109.5°
C21C22H22108.7°109.5°
C22C23C24112.2°109.5°
C23C22H21108.7°109.5°
C23C22H22108.7°109.5°
C22C23H23108.8°109.5°
C22C23H24108.8°109.5°
C2C1H31109.5°109.5°
C2C1H32109.5°109.4°
C2C1H33109.5°109.5°
C1C2H36108.7°109.5°
C1C2H37108.8°109.5°
C23C24C25113.9°109.5°
C24C23H23108.7°109.5°
C24C23H24108.8°109.4°
C23C24H38108.3°109.5°
C23C24H39108.4°109.5°
C24C25H25109.5°109.5°
C24C25H26109.5°109.4°
C24C25H27109.5°109.5°
C25C24H38108.4°109.5°
C25C24H39108.4°109.4°
H1C11H2109.5°109.4°
H3C12H4109.4°109.5°
H5C14H6109.5°109.5°
H7C15H8109.5°109.4°
H9C16H10109.4°109.5°
H11C17H12109.5°109.4°
H13C18H14109.4°109.4°
H15C19H16109.5°109.5°
H17C20H18109.5°109.5°
H19C21H20109.5°109.4°
H21C22H22109.4°109.4°
H23C23H24109.5°109.5°
H25C25H26109.5°109.4°
H25C25H27109.5°109.5°
H26C25H27109.4°109.5°
H28NH29109.5°111.0°
H31C1H32109.5°109.5°
H31C1H33109.4°109.5°
H32C1H33109.5°109.5°
H34C10H35109.5°109.5°
H36C2H37109.5°109.4°
H38C24H39109.5°109.5°
H40C3H41109.5°109.5°
H42C4H43109.5°109.5°
H44C5H45109.5°109.5°
H46C6H47109.5°109.4°
H48C8H49109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NC12C11H3120.2°120.0°
NC12C11H4120.2°120.0°
NC12C11O5149.2°65.0°
NC12C11H190.8°175.0°
NC12C11H229.2°55.0°
NC12H3H4119.3°120.0°
C12NH28H29120.0°124.0°
C12C11O5H1120.0°120.0°
C12C11O5H2120.0°120.0°
C12C11O5P148.5°180.0°
C12C11H1H2120.0°120.0°
C11C12H3H4119.3°120.0°
C11C12NH28180.0°180.0°
C11C12NH2960.0°56.0°
C11O5PO374.8°55.1°
C11O5PO445.9°65.0°
C11O5PO2165.3°175.0°
O5C11H1H2120.0°120.0°
O5C11C12H328.9°175.0°
O5C11C12H490.6°55.0°
O5PO3O4118.7°120.0°
O5PO3O2121.0°120.0°
O5PO4O2120.6°120.0°
O5PO2C1059.1°174.9°
PO5C11H128.5°60.0°
PO5C11H291.5°60.0°
O5PO4H51119.0°60.0°
O3PO4O2120.4°120.0°
O3PO2C10178.7°55.0°
O3PO4H510.0°180.0°
O4PO2C1059.7°65.0°
PO2C10C9103.4°180.0°
PO2C10H34136.6°60.0°
PO2C10H3516.6°60.1°
O2PO4H51120.4°60.0°
O2C10C9H34120.0°120.1°
O2C10C9H35120.0°119.9°
O2C10C9C887.5°55.1°
O2C10C9O632.9°65.0°
O2C10H34H35120.1°120.0°
O2C10C9H50153.4°175.0°
C10C9C8O6121.1°120.1°
C10C9C8H50119.1°120.0°
C10C9C8O1130.1°55.0°
C10C9O6H50119.4°120.0°
C10C9O6C1380.5°90.0°
C9C10H34H35120.1°120.0°
C10C9C8H4810.4°175.0°
C10C9C8H49110.1°65.0°
C9C8O1H48119.8°120.0°
C9C8O1H49119.8°120.0°
C8C9O6H50118.6°119.9°
C9C8O1C7114.2°180.0°
C8C9O6C13157.5°149.9°
C8C9C10H34152.5°65.0°
C8C9C10H3532.5°175.0°
C9C8H48H49120.7°120.0°
O1C8C9O6108.7°65.0°
C8O1C7O74.9°0.1°
C8O1C7C6104.6°180.0°
O1C8H48H49120.7°120.0°
O1C8C9H5011.0°175.0°
C9O6C13O761.1°0.1°
C9O6C13C14118.8°180.0°
O6C9C10H3487.1°175.0°
O6C9C10H35152.9°54.9°
O6C9C8H48131.5°54.9°
O6C9C8H4911.1°175.0°
O1C7OC6179.5°179.9°
O1C7C6C5177.2°180.0°
O1C7C6H4662.6°60.0°
O1C7C6H4756.9°59.9°
C7O1C8H48126.1°59.9°
C7O1C8H495.6°60.0°
O6C13O7C14179.9°179.9°
O6C13C14C1596.4°180.0°
O6C13C14H5143.3°60.1°
O6C13C14H624.0°60.0°
C13O6C9H5038.9°30.0°
O7C13C14C1583.7°0.0°
O7C13C14H536.7°120.0°
O7C13C14H6155.9°119.9°
OC7C6C53.4°0.1°
OC7C6H46116.9°120.1°
OC7C6H47123.6°120.0°
C7C6C5H46120.3°120.0°
C7C6C5H47120.3°120.0°
C7C6C5C4165.8°180.0°
C7C6C5H4445.3°60.0°
C7C6C5H4573.8°60.0°
C7C6H46H47119.2°120.0°
C13C14C15H5120.4°120.0°
C13C14C15H6120.4°120.0°
C13C14C15C16136.2°180.0°
C13C14H5H6118.8°120.0°
C13C14C15H715.8°60.0°
C13C14C15H8103.5°60.0°
C6C5C4H44120.4°119.9°
C6C5C4H45120.4°120.0°
C6C5C4C3131.8°180.0°
C6C5C4H4211.3°60.0°
C6C5C4H43107.6°60.0°
C6C5H44H45118.6°120.0°
C5C6H46H47119.2°120.0°
C14C15C16H7120.3°120.0°
C14C15C16H8120.3°120.1°
C14C15C16C17176.5°180.0°
C15C14H5H6118.8°120.0°
C14C15H7H8119.0°120.0°
C14C15C16H962.8°60.0°
C14C15C16H1055.8°60.0°
C15C16C17H9120.6°120.0°
C15C16C17H10120.7°120.1°
C15C16C17C18131.4°179.9°
C16C15C14H5103.5°60.1°
C16C15C14H615.8°60.0°
C16C15H7H8119.1°120.0°
C15C16H9H10118.0°120.0°
C15C16C17H1111.1°60.0°
C15C16C17H12108.3°60.0°
C5C4C3H42120.6°120.0°
C5C4C3H43120.6°120.0°
C5C4C3C2144.4°180.0°
C5C4C3H4023.9°60.0°
C5C4C3H4195.2°60.0°
C5C4H42H43118.2°120.0°
C4C5H44H45118.7°120.0°
C4C5C6H4674.0°60.0°
C4C5C6H4745.5°60.0°
C16C17C18H11120.3°120.0°
C16C17C18H12120.3°120.0°
C16C17C18C1962.7°180.0°
C17C16C15H756.1°60.0°
C17C16C15H863.2°59.9°
C17C16H9H10118.0°120.0°
C16C17H11H12119.1°120.0°
C16C17C18H1358.0°60.0°
C16C17C18H14176.7°60.0°
C4C3C2H40120.4°120.0°
C4C3C2H41120.4°120.0°
C4C3C2C1149.9°180.0°
C4C3C2H3629.5°60.0°
C4C3C2H3789.7°60.0°
C4C3H40H41118.7°120.0°
C3C4H42H43118.2°120.0°
C3C4C5H44107.7°60.0°
C3C4C5H4511.4°60.0°
C17C18C19H13120.6°120.1°
C17C18C19H14120.6°120.0°
C17C18C19C20143.9°180.0°
C18C17C16H9107.9°60.0°
C18C17C16H1010.7°60.0°
C18C17H11H12119.1°119.9°
C17C18H13H14118.1°120.0°
C17C18C19H1595.5°60.0°
C17C18C19H1623.4°60.1°
C18C19C20H15120.5°120.0°
C18C19C20H16120.5°120.0°
C18C19C20C2181.9°180.0°
C19C18C17H11177.1°60.0°
C19C18C17H1257.6°60.0°
C19C18H13H14118.1°120.0°
C18C19H15H16118.3°120.0°
C18C19C20H17157.6°60.0°
C18C19C20H1838.6°60.0°
C3C2C1H36120.4°120.0°
C3C2C1H37120.4°120.0°
C3C2C1H31180.0°60.0°
C3C2C1H3260.0°60.0°
C3C2C1H3360.0°180.0°
C3C2H36H37118.7°120.0°
C2C3H40H41118.7°120.0°
C2C3C4H4295.0°60.0°
C2C3C4H4323.8°60.1°
C19C20C21H17120.5°120.0°
C19C20C21H18120.5°120.0°
C19C20C21C22134.7°180.0°
C20C19C18H1323.3°60.0°
C20C19C18H1495.4°60.0°
C20C19H15H16118.3°120.0°
C19C20H17H18118.4°120.0°
C19C20C21H19104.5°59.9°
C19C20C21H2013.9°59.9°
C20C21C22H19120.8°120.0°
C20C21C22H20120.8°120.0°
C20C21C22C23124.8°180.0°
C21C20C19H1538.7°60.0°
C21C20C19H16157.6°60.0°
C21C20H17H18118.4°120.0°
C20C21H19H20117.5°119.9°
C20C21C22H214.3°60.0°
C20C21C22H22114.7°60.0°
C21C22C23H21120.5°120.0°
C21C22C23H22120.5°120.1°
C21C22C23C24161.5°180.0°
C22C21C20H1714.1°60.0°
C22C21C20H18104.8°60.0°
C22C21H19H20117.6°120.1°
C21C22H21H22118.6°120.0°
C21C22C23H2378.1°60.0°
C21C22C23H2441.1°60.0°
C22C23C24H23120.4°120.0°
C22C23C24H24120.4°120.0°
C22C23C24C25155.2°180.0°
C23C22C21H19114.4°60.0°
C23C22C21H204.0°60.0°
C23C22H21H22118.6°120.0°
C22C23H23H24118.8°120.0°
C22C23C24H3834.5°60.0°
C22C23C24H3984.2°60.0°
C2C1H31H32120.0°120.0°
C2C1H31H33120.0°120.0°
C2C1H32H33120.0°120.0°
C1C2H36H37118.8°120.0°
C1C2C3H4089.6°60.0°
C1C2C3H4129.5°60.0°
C23C24C25H38120.6°120.0°
C23C24C25H39120.6°120.0°
C24C23C22H2141.0°60.0°
C24C23C22H2278.0°60.0°
C24C23H23H24118.7°120.0°
C23C24C25H25180.0°60.0°
C23C24C25H2660.0°60.0°
C23C24C25H2760.0°180.0°
C23C24H38H39118.0°120.0°
C25C24C23H2384.4°60.0°
C25C24C23H2434.7°60.0°
C24C25H25H26120.0°120.0°
C24C25H25H27120.0°120.0°
C24C25H26H27120.0°120.0°
C25C24H38H39118.0°120.0°
H1C11C12H3148.9°55.0°
H1C11C12H429.4°65.0°
H2C11C12H391.1°65.0°
H2C11C12H4149.4°175.0°
H3C12NH2859.7°60.0°
H3C12NH2960.2°176.0°
H4C12NH2859.8°60.0°
H4C12NH29179.8°64.0°
H5C14C15H7136.2°180.0°
H5C14C15H816.9°60.0°
H6C14C15H7104.6°60.0°
H6C14C15H8136.1°180.0°
H7C15C16H9176.8°NaN°
H7C15C16H1064.5°60.0°
H8C15C16H957.4°60.1°
H8C15C16H10176.1°180.0°
H9C16C17H11131.8°179.9°
H9C16C17H1212.4°60.0°
H10C16C17H11109.6°60.1°
H10C16C17H12131.1°179.9°
H11C17C18H1362.3°180.0°
H11C17C18H1456.4°60.0°
H12C17C18H13178.3°60.0°
H12C17C18H1463.0°180.0°
H13C18C19H15143.8°179.9°
H13C18C19H1697.3°60.0°
H14C18C19H1525.1°60.0°
H14C18C19H16144.0°180.0°
H15C19C20H1781.9°180.0°
H15C19C20H18159.2°60.0°
H16C19C20H1737.0°60.0°
H16C19C20H1881.9°180.0°
H17C20C21H19134.9°179.9°
H17C20C21H20106.6°60.0°
H18C20C21H1916.0°60.0°
H18C20C21H20134.4°179.9°
H19C21C22H21125.1°180.0°
H19C21C22H226.0°60.0°
H20C21C22H21116.4°60.1°
H20C21C22H22124.5°180.0°
H21C22C23H23161.4°179.9°
H21C22C23H2479.4°60.0°
H22C22C23H2342.3°60.0°
H22C22C23H24161.5°179.9°
H23C23C24H38154.9°180.0°
H23C23C24H3936.2°60.0°
H24C23C24H3885.9°60.0°
H24C23C24H39155.4°180.0°
H25C25H26H27120.0°120.0°
H25C25C24H3859.4°179.9°
H25C25C24H3959.4°60.0°
H26C25C24H38179.4°60.0°
H26C25C24H3960.7°180.0°
H27C25C24H3860.6°60.0°
H27C25C24H39179.4°60.0°
H31C1H32H33120.0°120.0°
H31C1C2H3659.6°60.0°
H31C1C2H3759.6°180.0°
H32C1C2H36179.6°180.0°
H32C1C2H3760.4°60.0°
H33C1C2H3660.4°60.0°
H33C1C2H37179.6°60.0°
H34C10C9H5033.4°55.0°
H35C10C9H5086.6°65.1°
H36C2C3H40150.0°179.9°
H36C2C3H4190.9°60.0°
H37C2C3H4030.8°60.0°
H37C2C3H41149.9°180.0°
H40C3C4H42144.5°180.0°
H40C3C4H4396.6°60.0°
H41C3C4H4225.4°60.0°
H41C3C4H43144.3°180.0°
H42C4C5H44131.7°179.9°
H42C4C5H45109.1°60.0°
H43C4C5H4412.8°60.0°
H43C4C5H45132.0°180.0°
H44C5C6H46165.6°180.0°
H44C5C6H4775.0°60.0°
H45C5C6H4646.5°60.0°
H45C5C6H47165.9°180.0°
H48C8C9H50108.7°65.0°
H49C8C9H50130.8°55.0°

222415

PDB entries from 2024-07-10

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