Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

XIH

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5C6doub1.39Å1.35ÅAromatic
C5C3sing1.41Å1.51ÅAromatic
C5N16sing1.39Å1.48ÅAromatic
C6N7sing1.33Å1.47ÅAromatic
C6N26sing1.39Å1.48ÅAromatic
C8N7doub1.32Å1.34ÅAromatic
C8N9sing1.38Å1.46Å
C8N16sing1.36Å1.39ÅAromatic
C10N9sing1.47Å1.49Å
C10C11sing1.53Å1.56Å
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C13C15sing1.53Å1.51Å
C13C12sing1.53Å1.55Å
C13N14sing1.47Å1.47Å
C13H13sing1.09Å1.10Å
C15N9sing1.47Å1.46Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C17N16sing1.46Å1.45Å
C17C18sing1.51Å1.53Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C20C21doub1.38Å1.40ÅAromatic
C20C19sing1.38Å1.40ÅAromatic
C20H20sing1.08Å1.08Å
C21C22sing1.38Å1.41ÅAromatic
C21H21sing1.08Å1.08Å
C22C23doub1.40Å1.40ÅAromatic
C22H22sing1.08Å1.08Å
C24C23sing1.43Å1.43Å
C24N25trip1.14Å1.14Å
C28Nsing1.34Å1.39ÅAromatic
C28N26sing1.35Å1.41ÅAromatic
C28O29doub1.22Å1.26Å
CNsing1.47Å1.50Å
CH1sing1.09Å1.10Å
CH2sing1.09Å1.10Å
CH3sing1.09Å1.10Å
NC3sing1.35Å1.38ÅAromatic
C3Odoub1.22Å1.26Å
C11C12sing1.53Å1.55Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
N14H141sing1.01Å1.00Å
N14H142sing1.01Å1.00Å
C18C19doub1.38Å1.43ÅAromatic
C18C23sing1.40Å1.46ÅAromatic
C19H19sing1.08Å1.08Å
N26C27sing1.46Å1.48Å
C27H271sing1.09Å1.10Å
C27H272sing1.09Å1.10Å
C27H273sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6C5C3119.0°119.2°
C6C5N16106.3°106.3°
C5C6N7109.3°107.6°
C5C6N26119.4°118.8°
C3C5N16134.7°134.4°
C5C3N118.5°119.3°
C5C3O118.2°120.4°
C5N16C8106.4°106.7°
C5N16C17121.6°126.6°
N7C6N26131.3°133.7°
C6N7C8106.5°110.0°
C6N26C28122.1°120.0°
C6N26C27117.8°119.9°
N7C8N9123.2°125.3°
N7C8N16111.4°109.4°
N9C8N16125.3°125.3°
C8N9C10121.5°106.7°
C8N9C15122.2°106.7°
C8N16C17132.1°126.7°
N9C10C11110.5°109.8°
N9C10H101109.1°109.4°
N9C10H102108.9°109.4°
C10N9C15116.2°107.3°
C11C10H101109.1°109.4°
C11C10H102108.9°109.4°
C10C11C12112.2°109.2°
C10C11H111108.6°109.5°
C10C11H112107.9°109.5°
H101C10H102110.3°109.4°
C15C13C12108.5°109.2°
C15C13N14110.6°109.5°
C15C13H13110.8°109.6°
C13C15N9112.1°109.8°
C13C15H151108.6°109.5°
C13C15H152108.0°109.4°
C12C13N14113.5°109.5°
C12C13H13107.8°109.5°
C13C12C11111.4°108.9°
C13C12H121108.8°109.5°
C13C12H122108.4°109.5°
N14C13H13105.5°109.5°
C13N14H141109.5°106.7°
C13N14H142109.5°106.8°
N9C15H151108.6°109.4°
N9C15H152108.0°109.4°
H151C15H152111.6°109.4°
N16C17C18118.0°109.5°
N16C17H171106.7°109.5°
N16C17H172104.8°109.5°
C18C17H171106.7°109.5°
C18C17H172104.7°109.4°
C17C18C19111.7°120.1°
C17C18C23131.4°120.1°
H171C17H172116.4°109.5°
C21C20C19118.7°120.3°
C21C20H20120.6°119.8°
C20C21C22121.4°120.1°
C20C21H21119.3°119.9°
C19C20H20120.7°119.8°
C20C19C18122.6°120.1°
C20C19H19118.7°119.9°
C22C21H21119.3°119.9°
C21C22C23120.1°119.9°
C21C22H22119.9°120.0°
C23C22H22120.0°120.1°
C22C23C24113.5°120.2°
C22C23C18120.3°119.7°
C23C24N25175.2°179.9°
C24C23C18126.1°120.2°
NC28N26116.4°121.7°
NC28O29123.4°119.2°
C28NC118.8°119.5°
C28NC3124.7°121.0°
N26C28O29120.2°119.2°
C28N26C27120.2°120.0°
NCH1109.5°109.4°
NCH2109.5°109.4°
NCH3109.5°109.5°
CNC3116.5°119.5°
H1CH2109.5°109.5°
H1CH3109.4°109.5°
H2CH3109.5°109.6°
NC3O123.3°120.3°
C12C11H111108.5°109.5°
C12C11H112107.9°109.6°
C11C12H121108.8°109.6°
C11C12H122108.4°109.6°
H111C11H112111.6°109.6°
H121C12H122111.0°109.7°
H141N14H142109.5°106.7°
C19C18C23116.9°119.9°
C18C19H19118.7°120.0°
N26C27H271109.5°109.4°
N26C27H272109.5°109.5°
N26C27H273109.4°109.5°
H271C27H272109.4°109.4°
H271C27H273109.5°109.5°
H272C27H273109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6C5C3N16179.5°179.6°
C5C6N7N26179.7°179.9°
C5C6N7C80.7°0.1°
C6C5N16C80.1°0.0°
C6C5N16C17179.7°179.9°
C5C6N26C280.2°0.0°
C6C5C3N0.3°0.6°
C6C5C3O179.8°179.6°
C5C6N26C27179.9°180.0°
C3C5C6N7180.0°179.7°
C3C5C6N260.2°0.3°
C3C5N16C8179.5°179.6°
C3C5N16C170.1°0.3°
C5C3NC280.2°0.6°
C5C3NC179.7°179.8°
C5C3NO179.5°179.8°
N16C5C6N70.4°0.0°
N16C5C6N26179.9°180.0°
C5N16C8N70.5°0.0°
C5N16C8N9178.7°180.0°
C5N16C8C17179.6°179.9°
C5N16C17C1888.6°95.6°
C5N16C17H17131.4°24.4°
C5N16C17H172155.4°144.4°
N16C5C3N179.8°179.8°
N16C5C3O0.6°0.0°
C6N7C8N9178.5°180.0°
C6N7C8N160.7°0.1°
N7C6N26C28179.8°179.9°
N7C6N26C270.3°0.0°
N26C6N7C8179.6°180.0°
C6N26C28N0.1°0.0°
C6N26C28C27179.9°180.0°
C6N26C28O29179.5°179.9°
C6N26C27H27167.1°180.0°
C6N26C27H272172.9°60.0°
C6N26C27H27352.9°60.0°
N7C8N9N16179.2°180.0°
N7C8N9C1031.8°101.9°
N7C8N9C15144.5°12.6°
N7C8N16C17179.9°180.0°
C8N9C10C15176.6°114.1°
C8N9C10C11126.5°179.7°
C8N9C10H1016.5°60.2°
C8N9C10H102114.0°59.6°
C8N9C15C13119.1°179.7°
C8N9C15H1510.9°59.6°
C8N9C15H152122.1°60.2°
N9C8N16C170.9°0.1°
N16C8N9C10147.3°78.0°
N16C8N9C1536.3°167.5°
C8N16C17C1891.9°84.3°
C8N16C17H171148.2°155.7°
C8N16C17H17224.1°35.7°
N9C10C11H101120.0°120.1°
N9C10C11H102119.6°120.1°
N9C10H101H102119.6°119.9°
C10N9C15C1357.5°65.7°
C10N9C15H151177.4°54.4°
C10N9C15H15261.4°174.3°
N9C10C11C1246.8°61.4°
N9C10C11H111166.8°58.5°
N9C10C11H11272.0°178.7°
C11C10H101H102119.6°119.8°
C10C11C12C1351.9°55.6°
C11C10N9C1550.1°65.6°
C10C11C12H111120.0°119.9°
C10C11C12H112118.8°119.9°
C10C11H111H112118.9°120.1°
C10C11C12H12168.1°175.4°
C10C11C12H122171.1°64.2°
H101C10N9C15170.1°174.3°
H101C10C11C12166.8°178.5°
H101C10C11H11173.2°61.6°
H101C10C11H11247.9°58.6°
H102C10N9C1569.5°54.4°
H102C10C11C1272.8°58.7°
H102C10C11H11147.2°178.6°
H102C10C11H112168.4°61.3°
C15C13C12N14123.4°119.9°
C15C13C12H13120.1°120.0°
C15C13N14H13119.9°120.2°
C13C15N9H151120.0°120.1°
C13C15N9H152118.9°120.0°
C13C15H151H152118.9°119.9°
C15C13C12C1156.3°55.6°
C15C13C12H12163.7°175.4°
C15C13C12H122175.5°64.2°
C15C13N14H1417.8°179.7°
C15C13N14H142112.3°65.9°
C12C13N14H13117.9°120.1°
C12C13C15N958.1°61.4°
C12C13C15H151178.1°58.6°
C12C13C15H15260.8°178.5°
C13C12C11H121120.0°119.8°
C13C12C11H122119.2°119.8°
C13C12C11H111172.0°64.3°
C13C12C11H11266.9°175.5°
C13C12H121H122119.2°120.3°
C12C13N14H141114.4°60.1°
C12C13N14H142125.5°53.8°
N14C13C15N9176.8°178.7°
N14C13C15H15156.8°61.2°
N14C13C15H15264.3°58.7°
N14C13C12C11179.7°175.5°
N14C13C12H12159.7°64.7°
N14C13C12H12261.1°55.7°
C13N14H141H142120.0°113.9°
H13C13C15N960.1°58.5°
H13C13C15H15159.9°178.6°
H13C13C15H152179.0°61.5°
H13C13C12C1163.8°64.3°
H13C13C12H121176.2°55.4°
H13C13C12H12255.4°175.8°
H13C13N14H141127.7°60.1°
H13C13N14H1427.7°173.9°
N9C15H151H152119.0°119.8°
N16C17C18H171120.0°120.0°
N16C17C18H172116.0°120.0°
N16C17H171H172116.5°120.0°
N16C17C18C19167.6°68.3°
N16C17C18C2312.4°111.4°
C18C17H171H172116.5°120.0°
C17C18C19C20179.9°180.0°
C17C18C23C22179.6°179.7°
C17C18C23C240.6°0.3°
C17C18C19C23180.0°179.7°
C17C18C19H190.2°0.0°
H171C17C18C1947.6°171.6°
H171C17C18C23132.4°8.6°
H172C17C18C1976.4°51.7°
H172C17C18C23103.6°128.6°
C21C20C19H20180.0°179.9°
C20C21C22H21180.0°179.9°
C20C21C22C230.1°0.2°
C20C21C22H22179.9°179.9°
C21C20C19C180.2°0.0°
C21C20C19H19179.8°180.0°
C19C20C21C220.3°0.0°
C19C20C21H21179.7°179.9°
C20C19C18H19180.0°180.0°
C20C19C18C230.1°0.3°
H20C20C21C22179.7°179.9°
H20C20C21H210.3°0.0°
H20C20C19C18179.8°180.0°
H20C20C19H190.2°0.0°
C21C22C23H22180.0°179.9°
C21C22C23C24179.5°179.9°
C21C22C23C180.2°0.5°
H21C21C22C23179.9°179.7°
H21C21C22H220.1°0.1°
C22C23C24C18179.7°179.5°
C22C23C24N25104.2°142.1°
C22C23C18C190.3°0.5°
H22C22C23C240.5°0.2°
H22C22C23C18179.7°179.7°
C24C23C18C19179.4°180.0°
N25C24C23C1875.5°38.4°
NC28N26O29179.4°180.0°
C28NCC3180.0°179.6°
C28NCH1175.6°0.0°
C28NCH264.4°120.0°
C28NCH355.6°119.9°
C28NC3O179.8°179.6°
NC28N26C27180.0°180.0°
N26C28NC179.8°179.9°
N26C28NC30.1°0.3°
C28N26C27H271113.0°0.0°
C28N26C27H2727.0°120.0°
C28N26C27H273127.0°120.0°
O29C28NC0.5°0.0°
O29C28NC3179.5°179.6°
O29C28N26C270.6°0.1°
NCH1H2120.0°119.9°
NCH1H3120.0°120.0°
NCH2H3120.0°120.0°
CNC3O0.2°0.0°
H1CH2H3120.0°120.1°
H1CNC34.4°179.7°
H2CNC3115.6°60.4°
H3CNC3124.3°59.7°
C12C11H111H112118.8°120.2°
C11C12H121H122119.2°120.3°
H111C11C12H12151.9°55.5°
H111C11C12H12268.8°175.9°
H112C11C12H121173.1°64.7°
H112C11C12H12252.3°55.7°
C23C18C19H19179.9°179.7°
N26C27H271H272120.0°119.9°
N26C27H271H273120.0°120.0°
N26C27H272H273120.0°120.1°
H271C27H272H273120.0°120.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon