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SummaryGeometryRelated PDB entries

XH5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O03C02doub1.22Å1.18Å
C02N01sing1.34Å1.50Å
C02N04sing1.34Å1.51Å
N01C09sing1.46Å1.45Å
N04C05sing1.35Å1.45Å
C09C07sing1.53Å1.51Å
C05C07sing1.51Å1.52Å
C05O06doub1.21Å1.19Å
C07C08sing1.53Å1.62Å
C07H1sing1.09Å1.10Å
C08H2sing1.09Å1.10Å
C08H3sing1.09Å1.10Å
C08H4sing1.09Å1.10Å
C09H5sing1.09Å1.10Å
N04H6sing0.97Å1.00Å
C09H7sing1.09Å1.10Å
N01H8sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O03C02N01119.7°119.2°
O03C02N04120.3°119.2°
N01C02N04120.0°121.6°
C02N01C09120.4°120.9°
C02N01H8119.8°119.5°
C02N04C05120.0°121.0°
C02N04H6120.0°119.5°
N01C09C07119.9°109.5°
N01C09H5106.8°109.5°
N01C09H7106.8°109.4°
C09N01H8119.8°119.5°
N04C05C07120.0°120.0°
N04C05O06120.7°120.0°
C05N04H6120.0°119.5°
C09C07C05119.6°109.2°
C09C07C08106.6°109.5°
C09C07H1108.3°109.5°
C07C09H5106.8°109.5°
C07C09H7106.8°109.5°
C07C05O06119.3°120.0°
C05C07C08106.4°109.5°
C05C07H1108.2°109.6°
C08C07H1107.1°109.5°
C07C08H2109.5°109.5°
C07C08H3109.4°109.5°
C07C08H4109.5°109.5°
H2C08H3109.5°109.5°
H2C08H4109.5°109.5°
H3C08H4109.5°109.4°
H5C09H7109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O03C02N01N04179.9°179.7°
O03C02N01C09179.8°174.6°
O03C02N04C05179.8°167.7°
O03C02N04H60.2°12.3°
O03C02N01H80.2°5.4°
C02N01C09H8180.0°180.0°
N01C02N04C050.1°12.0°
C02N01C09C070.4°35.8°
C02N01C09H5121.9°155.9°
N01C02N04H6179.9°167.9°
C02N01C09H7121.0°84.1°
N04C02N01C090.1°5.7°
C02N04C05H6180.0°179.9°
C02N04C05C070.3°4.5°
C02N04C05O06179.9°175.6°
N04C02N01H8179.8°174.3°
N01C09C07H5121.5°120.0°
N01C09C07H7121.4°119.9°
N01C09C07C050.6°46.7°
N01C09C07C08120.0°166.6°
N01C09C07H1125.1°73.3°
N01C09H5H7115.3°119.9°
N04C05C07C090.5°34.3°
N04C05C07O06179.6°179.9°
N04C05C07C08120.2°154.2°
N04C05C07H1125.1°85.7°
C09C07C05C08120.7°119.9°
C09C07C05H1124.5°120.0°
C09C07C05O06179.9°145.8°
C09C07C08H1115.7°120.1°
C09C07C08H2180.0°59.7°
C09C07C08H360.0°60.3°
C09C07C08H460.0°179.8°
C07C09H5H7115.3°120.0°
C07C09N01H8179.6°144.2°
C05C07C08H1115.5°120.2°
C05C07C08H251.3°60.0°
C05C07C08H368.7°180.0°
C05C07C08H4171.3°60.0°
C05C07C09H5122.1°166.7°
C07C05N04H6179.7°175.6°
C05C07C09H7120.8°73.2°
O06C05C07C0859.4°25.9°
O06C05C07H155.4°94.2°
O06C05N04H60.1°4.4°
C07C08H2H3120.0°120.0°
C07C08H2H4120.0°120.0°
C07C08H3H4120.0°120.0°
C08C07C09H51.5°73.3°
C08C07C09H7118.6°46.7°
H1C07C08H264.3°179.8°
H1C07C08H3175.7°59.8°
H1C07C08H455.8°60.1°
H1C07C09H5113.4°46.7°
H1C07C09H73.6°166.8°
H2C08H3H4120.0°120.1°
H5C09N01H858.1°24.1°
H7C09N01H859.0°95.9°

222415

PDB entries from 2024-07-10

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