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XGD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C13C12sing1.40Å1.38ÅAromatic
C13N4doub1.31Å1.33ÅAromatic
C12N3doub1.31Å1.33ÅAromatic
N4N2sing1.29Å1.34ÅAromatic
C10C9doub1.38Å1.38ÅAromatic
C10C11sing1.39Å1.39ÅAromatic
N3N2sing1.29Å1.34ÅAromatic
N2C11sing1.40Å1.42Å
C9C8sing1.38Å1.38ÅAromatic
C11C6doub1.40Å1.40ÅAromatic
C32O4sing1.43Å1.43Å
C8C7doub1.38Å1.38ÅAromatic
C6C7sing1.40Å1.39ÅAromatic
C6C5sing1.48Å1.50Å
O4C31sing1.36Å1.37Å
N1C5sing1.35Å1.34Å
N1C4sing1.47Å1.46Å
C5Odoub1.22Å1.23Å
C4C3sing1.53Å1.51Å
C30C31doub1.39Å1.38ÅAromatic
C30C29sing1.38Å1.38ÅAromatic
C31C17sing1.39Å1.40ÅAromatic
O1Sdoub1.42Å1.43Å
C3C2sing1.51Å1.51Å
NSsing1.66Å1.63Å
NCsing1.40Å1.42Å
C1C2doub1.38Å1.39ÅAromatic
C1Csing1.39Å1.39ÅAromatic
C29C19doub1.39Å1.39ÅAromatic
C17Ssing1.76Å1.77Å
C17C18doub1.38Å1.39ÅAromatic
SO2doub1.42Å1.43Å
C2C14sing1.38Å1.39ÅAromatic
CC16doub1.39Å1.39ÅAromatic
C19C18sing1.39Å1.39ÅAromatic
C19C20sing1.48Å1.48Å
C14C15doub1.38Å1.38ÅAromatic
C16C15sing1.38Å1.38ÅAromatic
C21C20doub1.39Å1.39ÅAromatic
C21C22sing1.38Å1.38ÅAromatic
C20C28sing1.39Å1.39ÅAromatic
C22C23doub1.38Å1.38ÅAromatic
C28C24doub1.39Å1.39ÅAromatic
C23C24sing1.40Å1.39ÅAromatic
C24C25sing1.48Å1.49Å
C25O3doub1.22Å1.22Å
C25N5sing1.35Å1.34Å
C26N5sing1.47Å1.46Å
N5C27sing1.46Å1.45Å
N1H1sing0.97Å1.00Å
C4H2sing1.09Å1.10Å
C4H3sing1.09Å1.10Å
C7H4sing1.08Å1.08Å
C8H5sing1.08Å1.08Å
C10H6sing1.08Å1.08Å
C13H7sing1.08Å1.08Å
C15H8sing1.08Å1.08Å
C21H9sing1.08Å1.08Å
C22H10sing1.08Å1.08Å
C26H11sing1.09Å1.10Å
C26H12sing1.09Å1.10Å
C26H13sing1.09Å1.10Å
C28H14sing1.08Å1.08Å
NH15sing0.97Å1.00Å
C1H16sing1.08Å1.08Å
C12H17sing1.08Å1.08Å
C14H18sing1.08Å1.08Å
C16H19sing1.08Å1.08Å
C18H20sing1.08Å1.08Å
C23H21sing1.08Å1.08Å
C27H22sing1.09Å1.10Å
C27H23sing1.09Å1.10Å
C27H24sing1.09Å1.10Å
C29H25sing1.08Å1.08Å
C3H26sing1.09Å1.10Å
C3H27sing1.09Å1.10Å
C30H28sing1.08Å1.08Å
C32H29sing1.09Å1.10Å
C32H30sing1.09Å1.10Å
C32H31sing1.09Å1.10Å
C9H32sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C12C13N4109.2°105.9°
C13C12N3109.0°105.8°
C12C13H7125.4°127.0°
C13C12H17125.5°127.1°
C13N4N2103.5°108.7°
N4C13H7125.4°127.1°
C12N3N2103.6°108.8°
N3C12H17125.5°127.1°
N4N2N3114.8°110.8°
N4N2C11122.5°124.6°
C9C10C11119.6°120.1°
C10C9C8120.5°120.4°
C9C10H6120.2°120.0°
C10C9H32119.7°119.8°
C10C11N2118.2°120.2°
C10C11C6120.2°119.7°
C11C10H6120.2°119.9°
N3N2C11122.7°124.6°
N2C11C6121.5°120.1°
C9C8C7120.4°120.3°
C9C8H5119.8°119.9°
C8C9H32119.8°119.8°
C11C6C7119.1°119.6°
C11C6C5122.5°120.2°
C32O4C31117.5°117.0°
O4C32H29109.5°109.5°
O4C32H30109.5°109.5°
O4C32H31109.5°109.5°
C8C7C6120.1°119.9°
C8C7H4119.9°120.0°
C7C8H5119.8°119.8°
C7C6C5118.4°120.2°
C6C7H4119.9°120.1°
C6C5N1117.2°120.1°
C6C5O120.6°120.0°
O4C31C30124.3°119.9°
O4C31C17116.5°119.9°
C5N1C4121.2°120.0°
N1C5O122.1°119.9°
C5N1H1119.4°119.9°
N1C4C3113.3°109.4°
C4N1H1119.4°120.1°
N1C4H2108.5°109.5°
N1C4H3108.5°109.4°
C4C3C2110.0°109.4°
C3C4H2108.5°109.5°
C3C4H3108.5°109.5°
C4C3H26109.3°109.5°
C4C3H27109.3°109.4°
C31C30C29120.1°120.1°
C30C31C17119.1°120.1°
C31C30H28120.0°120.0°
C30C29C19121.6°120.0°
C30C29H25119.2°120.0°
C29C30H28119.9°120.0°
C31C17S120.7°120.0°
C31C17C18120.4°120.0°
O1SN105.4°106.4°
O1SC17107.6°106.4°
O1SO2119.5°123.1°
C3C2C1119.9°120.0°
C3C2C14120.9°120.0°
C2C3H26109.3°109.5°
C2C3H27109.3°109.5°
SNC132.2°120.0°
NSC17105.5°107.2°
NSO2110.0°106.4°
SNH15103.5°120.0°
NCC1115.6°120.1°
NCC16123.0°120.1°
CNH15103.5°119.9°
C2C1C121.1°120.0°
C1C2C14118.6°120.1°
C2C1H16119.5°120.0°
C1CC16119.5°119.8°
CC1H16119.5°120.0°
C29C19C18118.4°119.8°
C29C19C20120.2°120.1°
C19C29H25119.2°120.0°
SC17C18118.8°120.0°
C17SO2108.0°106.4°
C17C18C19120.3°120.0°
C17C18H20119.8°120.0°
C2C14C15120.7°120.1°
C2C14H18119.7°119.9°
CC16C15119.7°119.9°
CC16H19120.2°120.0°
C18C19C20121.3°120.1°
C19C18H20119.8°120.0°
C19C20C21120.4°120.1°
C19C20C28121.0°120.1°
C14C15C16120.3°120.1°
C14C15H8119.8°119.9°
C15C14H18119.7°120.0°
C16C15H8119.8°120.0°
C15C16H19120.1°120.0°
C20C21C22120.7°120.2°
C21C20C28118.4°119.9°
C20C21H9119.7°119.9°
C21C22C23120.2°120.3°
C22C21H9119.6°119.9°
C21C22H10119.9°119.9°
C20C28C24121.2°119.7°
C20C28H14119.4°120.1°
C22C23C24120.3°120.1°
C23C22H10119.9°119.9°
C22C23H21119.9°119.9°
C28C24C23119.1°119.8°
C28C24C25121.0°120.1°
C24C28H14119.4°120.2°
C23C24C25119.7°120.1°
C24C23H21119.8°120.0°
C24C25O3119.0°120.0°
C24C25N5118.7°120.0°
O3C25N5122.3°120.0°
C25N5C26126.4°119.9°
C25N5C27119.1°120.0°
C26N5C27114.5°120.0°
N5C26H11109.5°109.5°
N5C26H12109.5°109.4°
N5C26H13109.4°109.5°
N5C27H22109.5°109.5°
N5C27H23109.5°109.5°
N5C27H24109.5°109.5°
H2C4H3109.5°109.6°
H11C26H12109.4°109.5°
H11C26H13109.5°109.5°
H12C26H13109.5°109.4°
H22C27H23109.5°109.5°
H22C27H24109.5°109.5°
H23C27H24109.4°109.5°
H26C3H27109.5°109.4°
H29C32H30109.5°109.4°
H29C32H31109.4°109.5°
H30C32H31109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C12C13N4H7180.0°179.9°
C13C12N3H17180.0°180.0°
C12C13N4N20.1°0.0°
C13C12N3N20.0°0.0°
N4C13C12N30.0°0.0°
C13N4N2N30.1°0.1°
C13N4N2C11179.9°179.9°
N4C13C12H17180.0°180.0°
C12N3N2N40.1°0.1°
C12N3N2C11179.9°179.9°
N3C12C13H7180.0°179.9°
N4N2C11C1064.4°179.4°
N4N2N3C11179.9°180.0°
N4N2C11C6114.7°1.0°
N2N4C13H7179.9°180.0°
C9C10C11H6180.0°179.2°
C9C10C11N2178.8°180.0°
C10C9C8H32180.0°179.2°
C9C10C11C60.3°0.5°
C10C9C8C70.2°0.6°
C10C9C8H5179.8°179.5°
C10C11N2N3115.6°0.6°
C10C11N2C6179.1°179.5°
C11C10C9C80.0°0.8°
C10C11C6C70.4°0.1°
C10C11C6C5179.6°179.7°
C11C10C9H32180.0°180.0°
N3N2C11C665.3°179.0°
N2N3C12H17180.0°180.0°
N2C11C6C7178.7°179.5°
N2C11C6C50.5°0.2°
N2C11C10H61.2°0.8°
C9C8C7H5180.0°179.9°
C9C8C7C60.1°0.1°
C9C8C7H4179.9°180.0°
C8C9C10H6180.0°180.0°
C11C6C7C80.2°0.3°
C11C6C7C5179.2°179.7°
C11C6C5N174.1°124.2°
C11C6C5O103.8°55.9°
C11C6C7H4179.8°179.6°
C6C11C10H6179.7°179.7°
C32O4C31C303.3°0.0°
C32O4C31C17174.6°179.4°
O4C32H29H30120.0°120.0°
O4C32H29H31120.0°120.1°
O4C32H30H31120.0°120.0°
C8C7C6H4180.0°179.9°
C8C7C6C5179.5°179.9°
C7C8C9H32179.8°179.8°
C7C6C5N1106.7°55.5°
C7C6C5O75.5°124.5°
C6C7C8H5179.9°180.0°
C6C5N1O177.8°179.9°
C6C5N1C4161.7°180.0°
C6C5N1H118.3°0.2°
C5C6C7H40.6°0.0°
O4C31C30C17177.9°179.4°
O4C31C30C29177.5°180.0°
O4C31C17S2.7°0.3°
O4C31C17C18178.4°180.0°
O4C31C30H282.5°0.5°
C31O4C32H29180.0°60.0°
C31O4C32H3060.0°180.0°
C31O4C32H3160.0°60.0°
C5N1C4H1180.0°179.8°
C5N1C4C3119.2°180.0°
C5N1C4H21.4°60.0°
C5N1C4H3120.3°60.0°
C4N1C5O16.1°0.0°
N1C4C3H2120.6°120.0°
N1C4C3H3120.6°119.9°
N1C4C3C2159.7°180.0°
N1C4H2H3118.2°120.0°
N1C4C3H2680.2°60.0°
N1C4C3H2739.6°60.0°
OC5N1H1163.9°179.7°
C4C3C2H26120.1°120.0°
C4C3C2H27120.1°120.0°
C4C3C2C143.0°90.1°
C4C3C2C14127.7°89.8°
C3C4N1H160.8°0.3°
C3C4H2H3118.2°120.1°
C4C3H26H27119.7°120.0°
C31C30C29H28180.0°179.5°
C31C30C29C190.3°0.3°
C30C31C17S175.4°179.7°
C30C31C17C180.3°0.6°
C31C30C29H25179.7°179.7°
C29C30C31C170.4°0.6°
C30C29C19H25180.0°180.0°
C30C29C19C180.5°0.0°
C30C29C19C20177.7°180.0°
C31C17SO158.1°48.3°
C31C17SN54.0°65.3°
C31C17SC18175.8°179.7°
C31C17SO2171.6°178.8°
C31C17C18C191.1°0.3°
C31C17C18H20178.9°179.7°
C17C31C30H28179.6°179.9°
O1SNC17113.7°113.5°
O1SNO2130.1°132.9°
O1SNC169.3°48.5°
O1SC17O2130.3°132.9°
O1SC17C18126.1°131.4°
O1SNH1546.4°131.4°
C3C2C1C14171.0°179.8°
C3C2C1C165.9°180.0°
C3C2C14C15167.9°179.8°
C2C3C4H239.1°60.0°
C2C3C4H379.7°60.1°
C3C2C1H1614.2°0.2°
C3C2C14H1812.1°0.2°
C2C3H26H27119.7°120.1°
SNCH15122.9°179.9°
SNCC1148.2°135.0°
NSC17O2117.6°113.6°
NSC17C18121.7°115.0°
SNCC1616.2°45.0°
NCC1C2160.9°179.8°
NCC1C16165.0°179.9°
CNSC1777.1°65.0°
CNSO239.2°178.5°
NCC16C15162.9°180.0°
NCC1H1619.2°0.0°
NCC16H1917.1°0.1°
C2C1CH16180.0°179.8°
C2C1CC164.1°0.3°
C1C2C14C152.9°0.1°
C1C2C14H18177.0°180.0°
C1C2C3H2677.0°30.0°
C1C2C3H27163.1°150.0°
CC1C2C145.1°0.2°
C1CC16C150.9°0.1°
C1CNH1588.9°45.1°
C1CC16H19179.1°180.0°
C29C19C18C171.1°0.0°
C29C19C18C20178.2°180.0°
C29C19C20C2122.9°179.7°
C29C19C20C28151.8°0.1°
C29C19C18H20178.9°180.0°
C19C29C30H28179.7°179.8°
SC17C18C19174.7°180.0°
C17SNH15160.1°115.0°
SC17C18H205.3°0.1°
C18C17SO24.2°1.5°
C17C18C19H20180.0°179.9°
C17C18C19C20177.0°180.0°
O2SNH1583.7°1.5°
C2C14C15H18180.0°179.9°
C2C14C15C160.2°0.3°
C2C14C15H8179.8°179.9°
C14C2C1H16174.9°180.0°
C14C2C3H26112.2°150.2°
C14C2C3H277.6°30.2°
CC16C15C141.2°0.2°
CC16C15H19180.0°179.9°
CC16C15H8178.8°180.0°
C16CNH15106.7°135.0°
C16CC1H16175.9°180.0°
C18C19C20C21158.9°0.3°
C18C19C20C2826.4°180.0°
C18C19C29H25179.5°180.0°
C19C20C21C28174.9°179.7°
C19C20C21C22173.2°179.7°
C19C20C28C24172.9°179.7°
C19C20C21H96.8°0.4°
C19C20C28H147.2°0.3°
C20C19C18H202.9°0.0°
C20C19C29H252.3°0.0°
C14C15C16H8180.0°179.8°
C14C15C16H19178.8°179.7°
C16C15C14H18179.9°179.8°
C20C21C22H9180.0°179.9°
C20C21C22C230.4°0.0°
C21C20C28C242.0°0.1°
C20C21C22H10179.6°180.0°
C21C20C28H14178.0°179.9°
C22C21C20C281.7°0.1°
C21C22C23H10180.0°180.0°
C21C22C23C240.6°0.0°
C21C22C23H21179.4°179.9°
C20C28C24H14180.0°180.0°
C20C28C24C231.0°0.0°
C20C28C24C25175.6°180.0°
C28C20C21H9178.3°179.9°
C22C23C24C280.4°0.0°
C22C23C24H21180.0°180.0°
C22C23C24C25177.0°179.9°
C23C22C21H9179.6°179.9°
C28C24C23C25176.6°179.9°
C28C24C25O382.2°42.0°
C28C24C25N597.5°138.0°
C28C24C23H21179.7°180.0°
C23C24C25O394.4°138.1°
C23C24C25N585.9°42.0°
C24C23C22H10179.4°180.0°
C23C24C28H14179.0°180.0°
C24C25O3N5179.7°180.0°
C24C25N5C263.2°175.4°
C24C25N5C27174.4°4.6°
C25C24C28H144.4°0.0°
C25C24C23H213.0°0.1°
O3C25N5C26176.6°4.6°
O3C25N5C275.9°175.5°
C25N5C26C27177.6°180.0°
C25N5C26H11180.0°90.0°
C25N5C26H1260.0°150.0°
C25N5C26H1360.0°30.0°
C25N5C27H22180.0°84.3°
C25N5C27H2360.0°35.7°
C25N5C27H2460.0°155.8°
N5C26H11H12120.0°120.0°
N5C26H11H13120.0°120.1°
N5C26H12H13120.0°120.0°
C26N5C27H222.2°95.8°
C26N5C27H23122.2°144.3°
C26N5C27H24117.8°24.2°
C27N5C26H112.4°90.0°
C27N5C26H12117.6°30.0°
C27N5C26H13122.4°149.9°
N5C27H22H23120.0°120.0°
N5C27H22H24120.0°120.0°
N5C27H23H24120.0°120.0°
H1N1C4H2178.6°119.7°
H1N1C4H359.7°120.2°
H2C4C3H26159.2°179.9°
H2C4C3H2781.0°60.0°
H3C4C3H2640.4°59.9°
H3C4C3H27160.2°179.9°
H4C7C8H50.1°0.1°
H5C8C9H320.2°0.3°
H6C10C9H320.0°0.8°
H7C13C12H170.1°0.0°
H8C15C14H180.2°0.0°
H8C15C16H191.2°0.0°
H9C21C22H100.4°0.1°
H10C22C23H210.6°0.0°
H11C26H12H13120.0°120.0°
H22C27H23H24120.0°120.0°
H25C29C30H280.3°0.2°
H29C32H30H31120.0°120.0°

223532

PDB entries from 2024-08-07

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