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SummaryGeometryRelated PDB entries

XG1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
NARCAGsing1.38Å1.35Å
CAGNAIdoub1.31Å1.34ÅAromatic
CAGCAHsing1.46Å1.46ÅAromatic
NAICAAsing1.35Å1.36ÅAromatic
CAQCAPsing1.53Å1.52Å
CAHNAKdoub1.31Å1.33ÅAromatic
CAHCAJsing1.47Å1.46ÅAromatic
CACCAAdoub1.40Å1.39ÅAromatic
CACCAEsing1.37Å1.39ÅAromatic
CAACABsing1.41Å1.39ÅAromatic
NAKNALsing1.29Å1.41ÅAromatic
CAPCAOsing1.53Å1.53Å
CAECAFdoub1.39Å1.38ÅAromatic
CAJCABsing1.47Å1.39ÅAromatic
CAJCAMdoub1.37Å1.41ÅAromatic
CABCADdoub1.39Å1.38ÅAromatic
NALCANsing1.46Å1.47Å
NALCAMsing1.35Å1.33ÅAromatic
CAOCANsing1.53Å1.52Å
CAFCADsing1.38Å1.39ÅAromatic
NARH1sing0.97Å1.00Å
NARH2sing0.97Å1.00Å
CACH3sing1.08Å1.08Å
CAEH4sing1.08Å1.08Å
CAFH5sing1.08Å1.08Å
CADH6sing1.08Å1.08Å
CAMH7sing1.08Å1.08Å
CANH8sing1.09Å1.10Å
CANH9sing1.09Å1.10Å
CAOH10sing1.09Å1.10Å
CAOH11sing1.09Å1.10Å
CAPH12sing1.09Å1.10Å
CAPH13sing1.09Å1.10Å
CAQH14sing1.09Å1.10Å
CAQH15sing1.09Å1.10Å
CAQH16sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
NARCAGNAI124.3°119.7°
NARCAGCAH118.2°119.6°
CAGNARH1109.5°120.0°
CAGNARH2109.5°120.0°
NAICAGCAH117.5°120.7°
CAGNAICAA124.5°124.3°
CAGCAHNAK135.8°136.6°
CAGCAHCAJ117.6°117.6°
NAICAACAC118.5°119.9°
NAICAACAB121.4°121.4°
CAQCAPCAO114.0°109.4°
CAQCAPH12108.3°109.4°
CAQCAPH13108.3°109.4°
CAPCAQH14109.5°109.5°
CAPCAQH15109.5°109.5°
CAPCAQH16109.5°109.5°
NAKCAHCAJ106.6°105.8°
CAHNAKNAL107.4°110.8°
CAHCAJCAB121.0°117.5°
CAHCAJCAM108.4°104.8°
CAACACCAE120.7°120.2°
CACCAACAB119.9°118.8°
CAACACH3119.7°119.9°
CACCAECAF118.6°120.7°
CAECACH3119.6°120.0°
CACCAEH4120.7°119.7°
CAACABCAJ117.9°118.5°
CAACABCAD119.8°120.1°
NAKNALCAN115.0°124.2°
NAKNALCAM112.7°111.8°
CAPCAOCAN114.5°109.4°
CAPCAOH10108.2°109.5°
CAPCAOH11108.2°109.5°
CAOCAPH12108.3°109.5°
CAOCAPH13108.3°109.5°
CAECAFCAD121.4°120.3°
CAFCAEH4120.7°119.6°
CAECAFH5119.3°119.9°
CABCAJCAM130.5°137.7°
CAJCABCAD122.3°121.4°
CAJCAMNAL104.8°106.8°
CAJCAMH7127.6°126.6°
CABCADCAF119.6°119.9°
CABCADH6120.2°120.1°
CANNALCAM132.3°124.1°
NALCANCAO106.9°109.5°
NALCANH8110.1°109.5°
NALCANH9110.1°109.5°
NALCAMH7127.6°126.6°
CAOCANH8110.1°109.5°
CAOCANH9110.1°109.5°
CANCAOH10108.2°109.5°
CANCAOH11108.2°109.4°
CADCAFH5119.3°119.8°
CAFCADH6120.2°120.0°
H1NARH2109.4°120.0°
H8CANH9109.5°109.5°
H10CAOH11109.5°109.5°
H12CAPH13109.5°109.5°
H14CAQH15109.5°109.5°
H14CAQH16109.5°109.4°
H15CAQH16109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
NARCAGNAICAH178.8°179.7°
NARCAGNAICAA176.8°180.0°
NARCAGCAHNAK1.3°0.0°
NARCAGCAHCAJ179.9°179.8°
CAGNARH1H2120.0°179.7°
NAICAGCAHNAK177.6°179.7°
NAICAGCAHCAJ1.0°0.5°
CAGNAICAACAC179.4°180.0°
CAGNAICAACAB4.4°0.0°
NAICAGNARH10.0°0.0°
NAICAGNARH2120.0°179.7°
CAHCAGNAICAA2.0°0.3°
CAGCAHNAKCAJ178.7°179.8°
CAGCAHNAKNAL179.4°179.2°
CAGCAHCAJCAB1.7°0.5°
CAGCAHCAJCAM179.9°179.7°
CAHCAGNARH1178.8°179.7°
CAHCAGNARH258.9°0.6°
NAICAACACCAB175.1°180.0°
NAICAACACCAE177.3°180.0°
NAICAACABCAJ3.4°0.0°
NAICAACABCAD177.7°180.0°
NAICAACACH32.7°0.1°
CAQCAPCAOH12120.7°120.0°
CAQCAPCAOH13120.7°119.9°
CAQCAPCAOCAN154.6°NaN°
CAQCAPCAOH1033.9°60.0°
CAQCAPCAOH1184.6°60.0°
CAQCAPH12H13118.0°119.9°
CAPCAQH14H15120.0°120.0°
CAPCAQH14H16120.0°120.0°
CAPCAQH15H16120.0°120.0°
NAKCAHCAJCAB177.2°179.7°
NAKCAHCAJCAM1.2°0.2°
CAHNAKNALCAN178.8°180.0°
CAHNAKNALCAM2.1°0.7°
CAHCAJCABCAA0.4°0.3°
CAJCAHNAKNAL1.9°0.5°
CAHCAJCABCAM178.0°179.8°
CAHCAJCABCAD179.3°179.7°
CAHCAJCAMNAL0.1°0.2°
CAHCAJCAMH7179.9°179.7°
CAACACCAEH3180.0°180.0°
CAACACCAECAF0.4°0.1°
CACCAACABCAJ178.3°180.0°
CACCAACABCAD2.8°0.0°
CAACACCAEH4179.6°180.0°
CAECACCAACAB2.2°0.0°
CACCAECAFH4180.0°180.0°
CACCAECAFCAD2.5°0.1°
CACCAECAFH5177.5°180.0°
CAACABCAJCAD178.9°180.0°
CAACABCAJCAM177.6°180.0°
CAACABCADCAF0.7°0.1°
CABCAACACH3177.8°180.0°
CAACABCADH6179.3°180.0°
NAKNALCAMCAJ1.3°0.6°
NAKNALCANCAM178.8°179.2°
NAKNALCANCAO119.5°55.0°
NAKNALCAMH7178.7°179.4°
NAKNALCANH8120.9°65.0°
NAKNALCANH90.1°175.0°
CAPCAOCANNAL28.3°180.0°
CAPCAOCANH10120.7°120.0°
CAPCAOCANH11120.8°120.0°
CAPCAOCANH8147.9°60.0°
CAPCAOCANH991.3°60.0°
CAPCAOH10H11117.7°120.0°
CAOCAPH12H13117.9°120.1°
CAOCAPCAQH14180.0°180.0°
CAOCAPCAQH1560.0°60.0°
CAOCAPCAQH1660.0°60.0°
CAECAFCADCAB1.9°0.1°
CAECAFCADH5180.0°179.9°
CAFCAECACH3179.6°180.0°
CAECAFCADH6178.1°179.9°
CABCAJCAMNAL178.3°180.0°
CAJCABCADCAF179.6°179.9°
CAJCABCADH60.4°0.0°
CABCAJCAMH71.7°0.1°
CAMCAJCABCAD1.3°0.0°
CAJCAMNALCAN179.8°179.9°
CAJCAMNALH7180.0°180.0°
CABCADCAFH6180.0°180.0°
CABCADCAFH5178.1°180.0°
NALCANCAOH8119.6°120.0°
NALCANCAOH9119.6°120.0°
CANNALCAMH70.2°0.1°
NALCANH8H9121.2°120.0°
NALCANCAOH10149.1°60.0°
NALCANCAOH1192.4°60.0°
CAMNALCANCAO59.3°124.2°
CAMNALCANH860.3°115.8°
CAMNALCANH9178.9°4.2°
CAOCANH8H9121.2°120.0°
CANCAOH10H11117.7°120.0°
CANCAOCAPH1284.7°60.0°
CANCAOCAPH1334.0°60.1°
CADCAFCAEH4177.5°179.9°
H3CACCAEH40.4°0.0°
H4CAECAFH52.5°0.0°
H5CAFCADH61.9°0.0°
H8CANCAOH1091.3°180.0°
H8CANCAOH1127.2°60.0°
H9CANCAOH1029.5°60.0°
H9CANCAOH11148.0°180.0°
H10CAOCAPH12154.6°180.0°
H10CAOCAPH1386.8°59.9°
H11CAOCAPH1236.0°60.0°
H11CAOCAPH13154.7°179.9°
H12CAPCAQH1459.3°60.0°
H12CAPCAQH1560.7°180.0°
H12CAPCAQH16179.3°60.0°
H13CAPCAQH1459.4°60.0°
H13CAPCAQH15179.4°60.0°
H13CAPCAQH1660.6°180.0°
H14CAQH15H16120.0°120.0°

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PDB entries from 2024-07-17

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