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SummaryGeometryRelated PDB entries

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Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O11C09doub1.21Å1.26Å
O13C12doub1.21Å1.26Å
C09O10sing1.34Å1.26Å
C09C08sing1.51Å1.54Å
O01C02doub1.21Å1.19Å
C12C08sing1.51Å1.53Å
C12O14sing1.34Å1.26Å
C08C07sing1.53Å1.54Å
C07C06sing1.54Å1.67Å
C07C03sing1.54Å1.38Å
C02C03sing1.51Å1.55Å
C02C15sing1.47Å1.52Å
C06C05sing1.54Å1.39Å
C05C04sing1.55Å1.58Å
C16C15doub1.40Å1.38ÅAromatic
C16C17sing1.37Å1.38ÅAromatic
C03C04sing1.55Å1.63Å
C15C18sing1.40Å1.39ÅAromatic
C17C20doub1.40Å1.38ÅAromatic
C18C19doub1.37Å1.39ÅAromatic
C20C19sing1.40Å1.38ÅAromatic
C20C21sing1.48Å1.50Å
N22C21sing1.35Å1.35ÅAromatic
N22N23sing1.29Å1.34ÅAromatic
C21N25doub1.32Å1.35ÅAromatic
N23N24doub1.29Å1.31ÅAromatic
N25N24sing1.29Å1.34ÅAromatic
C03H1sing1.09Å1.10Å
C04H2sing1.09Å1.10Å
C04H3sing1.09Å1.10Å
C05H4sing1.09Å1.10Å
C05H5sing1.09Å1.10Å
C06H6sing1.09Å1.10Å
C06H7sing1.09Å1.10Å
C07H8sing1.09Å1.10Å
C08H9sing1.09Å1.10Å
C16H10sing1.08Å1.08Å
C17H11sing1.08Å1.08Å
C18H12sing1.08Å1.08Å
C19H13sing1.08Å1.08Å
N22H14sing0.97Å1.00Å
O10H15sing0.97Å0.95Å
O14H16sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O11C09O10119.0°120.0°
O11C09C08121.1°120.0°
O13C12C08119.1°120.0°
O13C12O14121.1°120.0°
O10C09C08119.9°120.0°
C09O10H15109.5°117.0°
C09C08C12106.5°109.5°
C09C08C07112.2°109.5°
C09C08H9107.9°109.5°
O01C02C03121.5°120.0°
O01C02C15118.5°120.0°
C08C12O14119.9°120.0°
C12C08C07114.1°109.4°
C12C08H9108.0°109.5°
C12O14H16109.5°117.0°
C08C07C06108.3°110.1°
C08C07C03117.0°110.0°
C08C07H8109.8°110.0°
C07C08H9107.9°109.5°
C06C07C03100.8°106.6°
C07C06C05102.9°106.6°
C07C06H6111.1°110.1°
C07C06H7111.1°110.1°
C06C07H8108.1°110.1°
C07C03C02111.9°110.5°
C07C03C04105.4°104.2°
C07C03H1112.9°110.6°
C03C07H8112.2°110.0°
C03C02C15120.0°120.0°
C02C03C04106.8°110.5°
C02C03H1110.3°110.5°
C02C15C16117.3°120.1°
C02C15C18122.7°120.0°
C06C05C04102.9°104.2°
C06C05H4111.1°110.5°
C06C05H5111.1°110.6°
C05C06H6111.1°110.0°
C05C06H7111.1°110.0°
C05C04C03103.7°102.7°
C05C04H2110.9°110.8°
C05C04H3110.9°110.9°
C04C05H4111.1°110.5°
C04C05H5111.1°110.5°
C15C16C17120.3°120.0°
C16C15C18120.0°119.9°
C15C16H10119.8°120.0°
C16C17C20119.2°120.1°
C17C16H10119.8°120.0°
C16C17H11120.4°120.0°
C04C03H1109.2°110.5°
C03C04H2110.9°110.8°
C03C04H3110.9°110.7°
C15C18C19120.0°119.9°
C15C18H12120.0°120.1°
C17C20C19121.1°120.1°
C17C20C21119.6°120.0°
C20C17H11120.4°119.9°
C18C19C20119.3°120.0°
C19C18H12120.0°120.0°
C18C19H13120.3°120.0°
C19C20C21119.2°119.9°
C20C19H13120.4°120.0°
C20C21N22124.0°126.8°
C20C21N25127.4°126.8°
C21N22N23106.3°107.0°
N22C21N25108.5°106.4°
C21N22H14126.9°126.5°
N22N23N24109.6°109.1°
N23N22H14126.8°126.5°
C21N25N24106.7°107.9°
N23N24N25108.8°109.6°
H2C04H3109.5°110.7°
H4C05H5109.5°110.4°
H6C06H7109.5°110.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O11C09O10C08178.4°180.0°
O11C09C08C1293.4°120.0°
O11C09C08C0732.1°0.0°
O11C09C08H9150.9°120.0°
O11C09O10H150.0°0.0°
O13C12C08C0932.8°120.0°
O13C12C08O14179.0°180.0°
O13C12C08C0791.5°0.0°
O13C12C08H9148.5°120.0°
O13C12O14H160.0°0.1°
O10C09C08C1285.0°60.0°
O10C09C08C07149.6°180.0°
O10C09C08H930.8°60.0°
C09C08C12C07124.3°120.0°
C09C08C12H9115.7°120.0°
C09C08C12O14146.2°60.0°
C09C08C07H9118.8°120.0°
C09C08C07C0674.2°178.6°
C09C08C07C03172.8°61.4°
C09C08C07H843.6°60.0°
C08C09O10H15178.4°180.0°
O01C02C03C0712.1°21.4°
O01C02C03C15177.8°179.8°
O01C02C15C1620.1°179.5°
O01C02C03C04102.7°93.3°
O01C02C15C18161.4°0.3°
O01C02C03H1138.8°144.2°
C12C08C07H9120.0°120.0°
C12C08C07C06164.5°61.4°
C12C08C07C0351.6°178.6°
C12C08C07H877.7°60.0°
C08C12O14H16178.9°179.9°
O14C12C08C0789.5°180.0°
O14C12C08H930.4°60.0°
C08C07C06C03123.3°119.3°
C08C07C06H8118.9°121.4°
C08C07C03H8128.1°121.4°
C08C07C03C0292.8°98.4°
C08C07C06C05174.7°119.2°
C08C07C03C04151.5°142.9°
C08C07C03H132.4°24.2°
C08C07C06H655.8°121.4°
C08C07C06H766.4°0.0°
C06C07C03H8114.8°119.3°
C06C07C03C02150.1°142.2°
C07C06C05H6118.9°119.4°
C07C06C05H7118.9°119.3°
C07C06C05C0441.6°23.7°
C06C07C03C0434.4°23.6°
C06C07C03H184.7°95.1°
C07C06C05H4160.6°142.3°
C07C06C05H577.3°95.1°
C07C06H6H7123.0°121.5°
C06C07C08H944.5°58.5°
C07C03C02C04114.8°114.7°
C07C03C02H1126.6°122.7°
C07C03C02C15165.6°158.8°
C03C07C06C0551.4°0.0°
C07C03C04C0511.9°38.0°
C07C03C04H1121.5°118.8°
C07C03C04H2131.0°80.4°
C07C03C04H3107.2°156.4°
C03C07C06H667.5°119.3°
C03C07C06H7170.3°119.3°
C03C07C08H968.4°58.7°
C02C03C04C05131.1°156.6°
C03C02C15C16157.7°0.3°
C02C03C04H1119.3°122.5°
C03C02C15C1820.7°180.0°
C02C03C04H2109.8°38.3°
C02C03C04H312.0°84.9°
C02C03C07H835.3°22.9°
C02C15C16C18178.5°179.8°
C02C15C16C17179.1°180.0°
C15C02C03C0479.5°86.5°
C02C15C18C19179.1°180.0°
C15C02C03H139.0°36.1°
C02C15C16H100.9°0.0°
C02C15C18H120.9°0.0°
C06C05C04H4119.0°118.6°
C06C05C04H5119.0°118.9°
C06C05C04C0321.6°38.0°
C06C05C04H297.5°80.3°
C06C05C04H3140.7°156.3°
C06C05H4H5123.1°122.7°
C05C06H6H7123.0°121.3°
C05C06C07H866.4°119.3°
C05C04C03H2119.1°118.4°
C05C04C03H3119.1°118.4°
C05C04C03H1109.6°80.8°
C05C04H2H3122.6°123.5°
C04C05H4H5123.0°122.6°
C04C05C06H677.3°95.7°
C04C05C06H7160.5°143.0°
C15C16C17H10180.0°180.0°
C15C16C17C200.4°0.0°
C16C15C18C190.7°0.3°
C15C16C17H11179.7°179.9°
C16C15C18H12179.3°179.7°
C17C16C15C180.6°0.2°
C16C17C20H11180.0°179.9°
C16C17C20C191.3°0.3°
C16C17C20C21178.5°180.0°
C03C04H2H3122.7°123.2°
C03C04C05H4140.5°156.6°
C03C04C05H597.4°80.8°
C04C03C07H880.4°95.7°
C15C18C19H12180.0°180.0°
C15C18C19C200.2°0.0°
C18C15C16H10179.4°179.7°
C15C18C19H13179.8°179.9°
C17C20C19C181.2°0.3°
C17C20C19C21177.2°179.7°
C17C20C21N2235.3°179.7°
C17C20C21N25148.8°0.0°
C20C17C16H10179.7°180.0°
C17C20C19H13178.8°179.7°
C18C19C20H13180.0°179.9°
C18C19C20C21178.4°180.0°
C19C20C21N22141.9°0.6°
C19C20C21N2534.0°179.8°
C19C20C17H11178.7°179.7°
C20C19C18H12179.8°180.0°
C20C21N22N25176.6°179.7°
C20C21N22N23177.8°180.0°
C20C21N25N24178.0°179.8°
C21C20C17H111.5°0.1°
C21C20C19H131.6°0.1°
C20C21N22H142.2°0.1°
C21N22N23H14180.0°179.9°
C21N22N23N240.4°0.0°
N22C21N25N241.6°0.5°
N23N22C21N251.2°0.3°
N22N23N24N250.6°0.3°
C21N25N24N231.4°0.5°
N25C21N22H14178.8°179.8°
N24N23N22H14179.6°179.9°
H1C03C04H29.4°160.8°
H1C03C04H3131.3°37.6°
H1C03C07H8160.5°145.6°
H2C04C05H421.5°38.3°
H2C04C05H5143.5°160.8°
H3C04C05H4100.4°85.1°
H3C04C05H521.7°37.5°
H4C05C06H641.6°22.9°
H4C05C06H780.5°98.4°
H5C05C06H6163.7°145.5°
H5C05C06H741.6°24.2°
H6C06C07H8174.7°0.0°
H7C06C07H852.5°121.4°
H8C07C08H9162.4°180.0°
H10C16C17H110.3°0.1°
H12C18C19H130.2°0.0°

251801

PDB entries from 2026-04-08

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