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XDL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.33Å1.33Å
N1C6sing1.46Å1.45Å
N1H1sing0.97Å0.99Å
C2C3sing1.50Å1.55Å
C2O2doub1.21Å1.32Å
C3O3sing1.43Å1.42Å
C3C4sing1.53Å1.54Å
C3H3sing1.09Å1.10Å
O3HAsing0.97Å0.99Å
C4C5sing1.53Å1.52Å
C4H4C1sing1.09Å1.10Å
C4H4C2sing1.09Å1.10Å
C5C6sing1.53Å1.52Å
C5H5C1sing1.09Å1.10Å
C5H5C2sing1.09Å1.10Å
C6H6C1sing1.09Å1.10Å
C6H6C2sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6126.3°124.1°
C2N1H1116.8°117.9°
N1C2C3118.7°123.6°
N1C2O2122.6°118.3°
C6N1H1116.8°118.0°
N1C6C5112.7°110.5°
N1C6H6C1108.7°109.3°
N1C6H6C2107.6°109.3°
C3C2O2118.7°118.2°
C2C3O3109.8°109.4°
C2C3C4113.6°109.9°
C2C3H3107.5°109.4°
O3C3C4112.4°109.4°
O3C3H3108.8°109.3°
C3O3HA109.5°106.9°
C4C3H3104.5°109.4°
C3C4C5107.8°108.4°
C3C4H4C1109.9°109.7°
C3C4H4C2110.5°109.6°
C5C4H4C1109.9°109.7°
C5C4H4C2110.5°109.7°
C4C5C6111.2°108.7°
C4C5H5C1109.0°109.5°
C4C5H5C2108.5°109.6°
H4C1C4H4C2108.4°109.7°
C6C5H5C1109.0°109.6°
C6C5H5C2108.4°109.6°
C5C6H6C1108.7°109.3°
C5C6H6C2107.6°109.3°
H5C1C5H5C2110.7°109.8°
H6C1C6H6C2111.7°109.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C6H1180.0°179.9°
N1C2C3O2180.0°179.8°
N1C2C3O3140.4°137.9°
N1C2C3C413.6°17.7°
N1C2C3H3101.5°102.4°
C2N1C6C510.0°19.2°
C2N1C6H6C1110.5°139.6°
C2N1C6H6C2128.5°101.2°
C6N1C2C35.8°2.4°
C6N1C2O2174.1°177.7°
N1C6C5C445.2°50.8°
N1C6C5H6C1120.5°120.3°
N1C6C5H6C2118.4°120.4°
N1C6C5H5C1165.4°69.0°
N1C6C5H5C274.0°170.5°
N1C6H6C1H6C2118.5°119.5°
H1N1C2C3174.2°177.7°
H1N1C2O25.8°2.1°
H1N1C6C5169.9°160.9°
H1N1C6H6C169.6°40.6°
H1N1C6H6C251.5°78.7°
C2C3O3C4127.4°120.4°
C2C3O3H3117.3°119.8°
C2C3C4H3116.8°120.1°
C2C3O3HA84.2°59.8°
C2C3C4C546.3°48.9°
C2C3C4H4C1166.1°168.7°
C2C3C4H4C274.4°70.8°
O2C2C3O339.7°42.3°
O2C2C3C4166.4°162.4°
O2C2C3H378.5°77.4°
O3C3C4H3117.8°119.7°
O3C3C4C5171.7°169.0°
O3C3C4H4C168.5°71.1°
O3C3C4H4C251.0°49.3°
C4C3O3HA43.2°179.8°
C3C4C5H4C1119.7°119.8°
C3C4C5H4C2120.8°119.7°
C3C4H4C1H4C2120.8°120.5°
C3C4C5C662.8°67.5°
C3C4C5H5C1176.9°52.3°
C3C4C5H5C256.3°172.8°
H3C3O3HA158.5°60.0°
H3C3C4C570.5°71.2°
H3C3C4H4C149.3°48.6°
H3C3C4H4C2168.8°169.1°
C5C4H4C1H4C2120.8°120.5°
C4C5C6H5C1120.2°119.7°
C4C5C6H5C2119.2°119.8°
C4C5H5C1H5C2119.2°120.4°
C4C5C6H6C175.3°171.1°
C4C5C6H6C2163.6°69.6°
H4C1C4C5C6177.5°172.7°
H4C1C4C5H5C157.2°67.5°
H4C1C4C5H5C263.4°52.9°
H4C2C4C5C657.9°52.2°
H4C2C4C5H5C162.3°172.0°
H4C2C4C5H5C2177.1°67.6°
C6C5H5C1H5C2119.2°120.5°
C5C6H6C1H6C2118.5°119.5°
H5C1C5C6H6C144.9°51.4°
H5C1C5C6H6C276.1°170.7°
H5C2C5C6H6C1165.5°69.1°
H5C2C5C6H6C244.4°50.1°

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PDB entries from 2024-07-17

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