Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

XB2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C06C04sing1.53Å1.54Å
C05C04sing1.53Å1.55Å
O01C02doub1.22Å1.47Å
C04N03sing1.47Å1.49Å
C02N03sing1.35Å1.32Å
C02N19sing1.34Å1.36Å
N03C07sing1.35Å1.36Å
N19C09sing1.37Å1.39Å
O20C07doub1.22Å1.40Å
C07C08sing1.40Å1.45Å
C09C08doub1.37Å1.37Å
C09N10sing1.37Å1.46Å
N10C11sing1.47Å1.45Å
C11C12sing1.51Å1.52Å
C11C18sing1.53Å1.50Å
C17C12doub1.38Å1.41ÅAromatic
C17C16sing1.38Å1.37ÅAromatic
C12C13sing1.38Å1.46ÅAromatic
C16C15doub1.38Å1.46ÅAromatic
C13C14doub1.38Å1.38ÅAromatic
C15C14sing1.38Å1.41ÅAromatic
C04H1sing1.09Å1.10Å
C05H2sing1.09Å1.10Å
C05H3sing1.09Å1.10Å
C05H4sing1.09Å1.10Å
C06H5sing1.09Å1.10Å
C06H6sing1.09Å1.10Å
C06H7sing1.09Å1.10Å
C08H8sing1.08Å1.08Å
N10H9sing0.97Å1.00Å
C11H10sing1.09Å1.10Å
C13H11sing1.08Å1.08Å
C14H12sing1.08Å1.08Å
C15H13sing1.08Å1.08Å
C16H14sing1.08Å1.08Å
C17H15sing1.08Å1.08Å
C18H16sing1.09Å1.10Å
C18H17sing1.09Å1.10Å
C18H18sing1.09Å1.10Å
N19H19sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C06C04C05112.4°109.5°
C06C04N03107.9°109.4°
C06C04H1106.8°109.5°
C04C06H5109.5°109.5°
C04C06H6109.5°109.5°
C04C06H7109.5°109.5°
C05C04N03115.4°109.5°
C05C04H1106.6°109.5°
C04C05H2109.5°109.5°
C04C05H3109.5°109.5°
C04C05H4109.4°109.5°
O01C02N03120.0°119.5°
O01C02N19118.9°119.5°
C04N03C02121.3°119.7°
C04N03C07118.0°119.7°
N03C04H1107.3°109.5°
N03C02N19121.0°121.0°
C02N03C07120.7°120.5°
C02N19C09121.2°120.4°
C02N19H19119.4°119.8°
N03C07O20118.5°120.2°
N03C07C08120.6°119.6°
N19C09C08119.8°119.4°
N19C09N10117.8°120.3°
C09N19H19119.4°119.8°
O20C07C08120.9°120.2°
C07C08C09116.6°119.1°
C07C08H8121.7°120.4°
C08C09N10122.4°120.3°
C09C08H8121.7°120.5°
C09N10C11121.1°120.0°
C09N10H9106.5°120.0°
N10C11C12110.7°109.5°
N10C11C18109.3°109.5°
C11N10H9106.5°120.0°
N10C11H10109.3°109.4°
C12C11C18110.5°109.5°
C11C12C17120.9°119.9°
C11C12C13119.1°120.0°
C12C11H10108.4°109.4°
C18C11H10108.7°109.4°
C11C18H16109.5°109.4°
C11C18H17109.5°109.5°
C11C18H18109.5°109.5°
C12C17C16119.9°120.0°
C17C12C13120.0°120.1°
C12C17H15120.1°120.1°
C17C16C15120.2°120.0°
C17C16H14119.9°120.0°
C16C17H15120.0°119.9°
C12C13C14119.8°120.0°
C12C13H11120.1°120.0°
C16C15C14119.7°120.0°
C16C15H13120.2°120.0°
C15C16H14119.9°120.0°
C13C14C15120.4°120.0°
C14C13H11120.1°120.0°
C13C14H12119.8°120.0°
C15C14H12119.8°120.0°
C14C15H13120.2°120.0°
H2C05H3109.5°109.5°
H2C05H4109.5°109.4°
H3C05H4109.5°109.5°
H5C06H6109.5°109.5°
H5C06H7109.4°109.4°
H6C06H7109.4°109.5°
H16C18H17109.5°109.5°
H16C18H18109.5°109.4°
H17C18H18109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C06C04C05N03124.3°120.0°
C06C04C05H1116.6°120.0°
C06C04N03H1114.7°120.0°
C06C04N03C0270.2°120.0°
C06C04N03C07107.1°60.0°
C06C04C05H2180.0°60.0°
C06C04C05H360.0°60.0°
C06C04C05H460.0°180.0°
C04C06H5H6120.0°120.0°
C04C06H5H7120.0°120.0°
C04C06H6H7120.0°120.0°
C05C04N03H1118.7°120.0°
C05C04N03C0256.4°120.0°
C05C04N03C07126.3°59.9°
C04C05H2H3120.0°120.0°
C04C05H2H4120.0°120.0°
C04C05H3H4120.0°120.0°
C05C04C06H5180.0°180.0°
C05C04C06H660.0°60.0°
C05C04C06H760.0°60.0°
O01C02N03C043.2°0.1°
O01C02N03N19176.1°179.8°
O01C02N03C07179.6°180.0°
O01C02N19C09179.5°179.7°
O01C02N19H190.5°0.1°
C04N03C02C07177.2°179.9°
C04N03C02N19179.3°179.8°
C04N03C07O201.9°0.1°
C04N03C07C08179.4°180.0°
N03C04C05H255.7°60.0°
N03C04C05H364.4°180.0°
N03C04C05H4175.7°60.0°
N03C04C06H551.6°60.0°
N03C04C06H6171.7°180.0°
N03C04C06H768.4°60.0°
N03C02N19C093.4°0.4°
C02N03C07O20179.2°180.0°
C02N03C07C082.1°0.0°
C02N03C04H1175.1°0.0°
N03C02N19H19176.7°179.7°
N19C02N03C073.5°0.2°
C02N19C09H19180.0°179.9°
C02N19C09C081.8°0.5°
C02N19C09N10175.1°179.8°
N03C07O20C08178.7°180.0°
N03C07C08C090.6°0.0°
C07N03C04H17.6°180.0°
N03C07C08H8179.4°180.0°
N19C09C08C070.5°0.3°
N19C09C08N10176.8°179.7°
N19C09N10C11170.8°0.3°
N19C09C08H8179.5°179.8°
N19C09N10H967.6°179.8°
O20C07C08C09179.2°179.9°
O20C07C08H80.7°0.0°
C07C08C09H8180.0°179.9°
C07C08C09N10176.3°180.0°
C08C09N10C1112.4°180.0°
C08C09N10H9109.2°0.1°
C08C09N19H19178.2°179.6°
C09N10C11H9121.6°179.9°
C09N10C11C1282.1°155.0°
C09N10C11C18155.9°84.9°
N10C09C08H83.7°0.1°
C09N10C11H1037.1°35.0°
N10C09N19H194.9°0.1°
N10C11C12C18121.2°120.1°
N10C11C12H10119.8°120.0°
N10C11C18H10119.2°119.9°
N10C11C12C1725.4°40.3°
N10C11C12C13155.5°140.0°
N10C11C18H16180.0°60.0°
N10C11C18H1760.0°180.0°
N10C11C18H1860.0°59.9°
C12C11C18H10118.8°120.0°
C11C12C17C13179.1°179.7°
C11C12C17C16176.9°179.7°
C11C12C13C14177.6°180.0°
C12C11N10H9156.2°25.1°
C11C12C13H112.4°0.0°
C11C12C17H153.1°0.0°
C12C11C18H1657.9°60.1°
C12C11C18H17178.0°59.9°
C12C11C18H1862.1°180.0°
C18C11C12C1795.8°79.8°
C18C11C12C1383.3°99.9°
C18C11N10H934.3°95.0°
C11C18H16H17120.0°120.0°
C11C18H16H18120.0°120.0°
C11C18H17H18120.0°120.1°
C12C17C16H15180.0°179.7°
C12C17C16C152.5°0.5°
C17C12C13C141.5°0.3°
C17C12C11H10145.3°160.3°
C17C12C13H11178.5°179.7°
C12C17C16H14177.5°179.7°
C16C17C12C132.2°0.6°
C17C16C15H14180.0°179.8°
C17C16C15C142.1°0.2°
C17C16C15H13177.9°179.7°
C12C13C14H11180.0°180.0°
C12C13C14C151.1°0.0°
C13C12C11H1035.6°20.0°
C12C13C14H12178.9°180.0°
C13C12C17H15177.8°179.7°
C16C15C14C131.4°0.0°
C16C15C14H13180.0°180.0°
C16C15C14H12178.6°180.0°
C15C16C17H15177.5°179.7°
C13C14C15H12180.0°180.0°
C13C14C15H13178.6°180.0°
C15C14C13H11178.9°180.0°
C14C15C16H14177.9°180.0°
H1C04C05H263.3°180.0°
H1C04C05H3176.6°60.0°
H1C04C05H456.7°60.0°
H1C04C06H563.4°60.0°
H1C04C06H656.6°60.0°
H1C04C06H7176.6°NaN°
H2C05H3H4120.0°120.0°
H5C06H6H7120.0°120.0°
H9N10C11H1084.5°145.0°
H10C11C18H1660.8°179.9°
H10C11C18H1759.2°60.0°
H10C11C18H18179.1°60.1°
H11C13C14H121.1°0.1°
H12C14C15H131.4°0.0°
H13C15C16H142.1°0.0°
H14C16C17H152.5°0.0°
H16C18H17H18120.0°119.9°

247536

PDB entries from 2026-01-14

PDB statisticsPDBj update infoContact PDBjnumon