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XAV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.33Å1.32ÅAromatic
N1C6doub1.32Å1.35ÅAromatic
C2N3doub1.32Å1.34ÅAromatic
C2CAPsing1.48Å1.41ÅAromatic
N3C4sing1.34Å1.31ÅAromatic
C4C5doub1.37Å1.39ÅAromatic
C4CAJsing1.50Å1.53Å
C5C6sing1.41Å1.40ÅAromatic
C5CAKsing1.51Å1.50Å
C6O6sing1.35Å1.35Å
FABCAUsing1.40Å1.31Å
FACCAUsing1.40Å1.33Å
FADCAUsing1.40Å1.33Å
CAECAGdoub1.38Å1.40ÅAromatic
CAECAPsing1.39Å1.38ÅAromatic
CAFCAHsing1.38Å1.40ÅAromatic
CAFCAPdoub1.39Å1.41ÅAromatic
CAGCAQsing1.38Å1.37ÅAromatic
CAHCAQdoub1.38Å1.39ÅAromatic
CAICAJsing1.52Å1.51Å
CAISANsing1.82Å1.82Å
CAKSANsing1.81Å1.82Å
CAQCAUsing1.51Å1.55Å
O6HO6sing0.97Å0.95Å
CAEHAEsing1.08Å1.08Å
CAFHAFsing1.08Å1.08Å
CAGHAGsing1.08Å1.08Å
CAHHAHsing1.08Å1.08Å
CAIHAIsing1.09Å1.10Å
CAIHAIAsing1.09Å1.10Å
CAJHAJsing1.09Å1.10Å
CAJHAJAsing1.09Å1.10Å
CAKHAKsing1.09Å1.10Å
CAKHAKAsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6120.1°119.9°
N1C2N3118.5°121.3°
N1C2CAP122.1°119.4°
N1C6C5121.8°120.0°
N1C6O6121.0°120.0°
N3C2CAP119.4°119.4°
C2N3C4124.7°122.2°
C2CAPCAE120.5°120.1°
C2CAPCAF122.3°120.1°
N3C4C5119.0°118.1°
N3C4CAJ115.2°115.0°
C5C4CAJ125.8°126.9°
C4C5C6116.0°118.5°
C4C5CAK123.6°125.8°
C4CAJCAI110.5°113.3°
C4CAJHAJ109.1°108.7°
C4CAJHAJA109.1°108.6°
C6C5CAK120.3°115.7°
C5C6O6117.2°120.0°
C5CAKSAN111.9°110.3°
C5CAKHAK108.7°109.3°
C5CAKHAKA108.7°109.3°
C6O6HO6109.5°114.0°
FABCAUFAC108.3°109.5°
FABCAUFAD107.7°109.5°
FABCAUCAQ110.7°109.5°
FACCAUFAD110.4°109.4°
FACCAUCAQ109.2°109.5°
FADCAUCAQ110.5°109.5°
CAGCAECAP123.1°119.9°
CAECAGCAQ119.8°120.1°
CAGCAEHAE118.5°120.1°
CAECAGHAG120.1°119.9°
CAECAPCAF117.2°119.8°
CAPCAEHAE118.5°120.0°
CAHCAFCAP119.6°119.8°
CAFCAHCAQ121.6°120.1°
CAHCAFHAF120.2°120.1°
CAFCAHHAH119.2°119.9°
CAPCAFHAF120.2°120.1°
CAGCAQCAH118.8°120.3°
CAGCAQCAU117.9°119.8°
CAQCAGHAG120.1°120.0°
CAHCAQCAU123.3°119.9°
CAQCAHHAH119.2°119.9°
CAJCAISAN106.8°107.9°
CAJCAIHAI110.4°109.7°
CAJCAIHAIA110.4°109.8°
CAICAJHAJ109.1°108.7°
CAICAJHAJA109.1°108.7°
CAISANCAK95.4°100.9°
SANCAIHAI110.4°109.8°
SANCAIHAIA110.4°109.8°
SANCAKHAK108.7°109.3°
SANCAKHAKA108.7°109.4°
HAICAIHAIA108.5°109.8°
HAJCAJHAJA109.8°108.6°
HAKCAKHAKA110.2°109.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2N3CAP178.6°180.0°
N1C2N3C43.0°0.1°
C2N1C6C50.2°0.1°
C2N1C6O6178.8°180.0°
N1C2CAPCAE13.4°0.0°
N1C2CAPCAF167.4°180.0°
C6N1C2N32.4°0.5°
C6N1C2CAP179.0°179.5°
N1C6C5C41.5°0.8°
N1C6C5O6178.7°180.0°
N1C6C5CAK178.7°178.3°
N1C6O6HO60.0°90.0°
C2N3C4C51.3°1.0°
C2N3C4CAJ180.0°177.9°
N3C2CAPCAE168.1°180.0°
N3C2CAPCAF11.1°0.0°
CAPC2N3C4178.3°180.0°
C2CAPCAECAG178.1°180.0°
C2CAPCAECAF179.2°180.0°
C2CAPCAFCAH180.0°180.0°
C2CAPCAEHAE1.9°0.3°
C2CAPCAFHAF0.0°0.0°
N3C4C5CAJ178.6°178.8°
N3C4C5C61.0°1.3°
N3C4C5CAK178.0°177.7°
N3C4CAJCAI156.4°159.2°
N3C4CAJHAJ83.6°79.8°
N3C4CAJHAJA36.4°38.2°
C4C5C6CAK177.1°179.1°
C4C5C6O6177.2°179.1°
C5C4CAJCAI22.3°22.0°
C4C5CAKSAN20.7°19.9°
C5C4CAJHAJ97.8°99.0°
C5C4CAJHAJA142.2°143.0°
C4C5CAKHAK99.3°100.3°
C4C5CAKHAKA140.7°140.2°
CAJC4C5C6177.6°177.4°
CAJC4C5CAK0.6°3.6°
C4CAJCAIHAJ120.0°121.0°
C4CAJCAIHAJA120.0°120.9°
C4CAJCAISAN60.6°53.1°
C4CAJCAIHAI179.4°172.6°
C4CAJCAIHAIA59.4°66.6°
C4CAJHAJHAJA119.6°118.0°
C6C5CAKSAN162.4°161.1°
C5C6O6HO6178.7°90.0°
C6C5CAKHAK77.6°78.7°
C6C5CAKHAKA42.4°40.8°
CAKC5C6O60.0°1.8°
C5CAKSANCAI50.8°45.9°
C5CAKSANHAK120.0°120.2°
C5CAKSANHAKA120.0°120.2°
C5CAKHAKHAKA119.0°119.6°
FABCAUFACFAD117.7°120.0°
FABCAUFACCAQ120.7°120.0°
FABCAUFADCAQ121.1°120.0°
FABCAUCAQCAG170.4°90.0°
FABCAUCAQCAH9.3°90.0°
FACCAUFADCAQ120.9°120.0°
FACCAUCAQCAG51.2°30.0°
FACCAUCAQCAH128.5°150.0°
FADCAUCAQCAG70.4°150.0°
FADCAUCAQCAH109.9°30.0°
CAGCAECAPHAE180.0°179.8°
CAGCAECAPCAF1.1°0.0°
CAECAGCAQHAG180.0°180.0°
CAECAGCAQCAH1.6°0.0°
CAECAGCAQCAU178.7°180.0°
CAECAPCAFCAH0.8°0.0°
CAPCAECAGCAQ2.3°0.0°
CAECAPCAFHAF179.2°180.0°
CAPCAECAGHAG177.6°180.0°
CAHCAFCAPHAF180.0°179.9°
CAFCAHCAQCAG0.3°0.0°
CAFCAHCAQHAH180.0°180.0°
CAFCAHCAQCAU179.4°180.0°
CAPCAFCAHCAQ1.5°0.0°
CAFCAPCAEHAE178.9°179.7°
CAPCAFCAHHAH178.5°180.0°
CAGCAQCAHCAU179.7°180.0°
CAQCAGCAEHAE177.6°179.7°
CAGCAQCAHHAH179.7°180.0°
CAQCAHCAFHAF178.5°180.0°
CAHCAQCAGHAG178.4°180.0°
CAJCAISANHAI120.0°119.5°
CAJCAISANHAIA120.0°119.6°
CAJCAISANCAK72.6°63.8°
CAJCAIHAIHAIA121.1°120.8°
CAICAJHAJHAJA119.6°118.2°
SANCAIHAIHAIA121.1°120.8°
SANCAICAJHAJ59.4°67.9°
SANCAICAJHAJA179.4°174.0°
CAISANCAKHAK69.2°74.3°
CAISANCAKHAKA170.9°166.1°
CAKSANCAIHAI167.4°176.7°
CAKSANCAIHAIA47.5°55.8°
SANCAKHAKHAKA119.0°119.7°
CAUCAQCAGHAG1.3°0.0°
CAUCAQCAHHAH0.6°0.0°
HAECAECAGHAG2.4°0.3°
HAFCAFCAHHAH1.5°0.1°
HAICAICAJHAJ60.6°51.6°
HAICAICAJHAJA59.4°66.5°
HAIACAICAJHAJ179.4°172.4°
HAIACAICAJHAJA60.6°54.4°

246704

PDB entries from 2025-12-24

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