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SummaryGeometryRelated PDB entries

X5N

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C16N15sing1.47Å1.47Å
C16C17sing1.53Å1.54Å
N15C14sing1.47Å1.47Å
C17C12sing1.53Å1.54Å
C14C13sing1.53Å1.54Å
O01C02doub1.21Å1.22Å
C12C13sing1.53Å1.54Å
C12N11sing1.46Å1.50Å
C24C23sing1.40Å1.43ÅAromatic
C24C25doub1.35Å1.35ÅAromatic
C23C22doub1.36Å1.35ÅAromatic
C02N11sing1.35Å1.36Å
C02C03sing1.51Å1.52Å
N11C10sing1.40Å1.40Å
C25N26sing1.36Å1.38ÅAromatic
C03O04sing1.43Å1.44Å
C22C21sing1.41Å1.42ÅAromatic
C10N09doub1.32Å1.31ÅAromatic
C10C05sing1.40Å1.40ÅAromatic
N09C08sing1.33Å1.34ÅAromatic
N26C21sing1.37Å1.39ÅAromatic
N26C18sing1.38Å1.40ÅAromatic
C21N20doub1.33Å1.32ÅAromatic
O04C05sing1.36Å1.38Å
C05C06doub1.39Å1.37ÅAromatic
C18C08sing1.48Å1.45Å
C18C19doub1.37Å1.37ÅAromatic
C08C07doub1.40Å1.39ÅAromatic
N20C19sing1.33Å1.37ÅAromatic
C06C07sing1.39Å1.39ÅAromatic
C17H1sing1.09Å1.10Å
C17H2sing1.09Å1.10Å
C13H3sing1.09Å1.10Å
C13H4sing1.09Å1.10Å
C14H5sing1.09Å1.10Å
C14H6sing1.09Å1.10Å
C12H7sing1.09Å1.10Å
C03H8sing1.09Å1.10Å
C03H9sing1.09Å1.10Å
C06H10sing1.08Å1.08Å
C07H11sing1.08Å1.08Å
C16H12sing1.09Å1.10Å
C16H13sing1.09Å1.10Å
C19H14sing1.08Å1.08Å
C22H15sing1.08Å1.08Å
C23H16sing1.08Å1.08Å
C24H17sing1.08Å1.08Å
C25H18sing1.08Å1.08Å
N15H19sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N15C16C17109.4°109.5°
C16N15C14114.5°111.2°
N15C16H12109.5°109.4°
N15C16H13109.5°109.5°
C16N15H19108.2°111.0°
C16C17C12115.0°109.3°
C16C17H1108.1°109.5°
C16C17H2108.1°109.5°
C17C16H12109.5°109.4°
C17C16H13109.5°109.5°
N15C14C13110.8°109.5°
N15C14H5109.1°109.4°
N15C14H6109.1°109.4°
C14N15H19108.2°111.0°
C17C12C13112.6°109.2°
C17C12N11114.8°109.5°
C12C17H1108.1°109.5°
C12C17H2108.1°109.5°
C17C12H7104.3°109.5°
C14C13C12113.5°109.4°
C14C13H3108.5°109.5°
C14C13H4108.4°109.5°
C13C14H5109.1°109.5°
C13C14H6109.2°109.5°
O01C02N11124.3°120.1°
O01C02C03119.1°120.1°
C13C12N11114.5°109.6°
C12C13H3108.4°109.5°
C12C13H4108.5°109.6°
C13C12H7104.4°109.5°
C12N11C02121.4°120.4°
C12N11C10113.2°120.4°
N11C12H7104.8°109.6°
C23C24C25119.9°120.3°
C24C23C22120.4°119.7°
C24C23H16119.8°120.2°
C23C24H17120.0°119.8°
C24C25N26120.5°120.5°
C25C24H17120.1°119.9°
C24C25H18119.8°119.7°
C23C22C21119.7°119.3°
C23C22H15120.2°120.3°
C22C23H16119.8°120.1°
N11C02C03116.6°119.9°
C02N11C10119.6°119.2°
C02C03O04113.3°109.5°
C02C03H8108.5°109.4°
C02C03H9108.5°109.4°
N11C10N09117.9°120.4°
N11C10C05121.1°119.1°
C25N26C21120.8°120.6°
C25N26C18133.2°132.5°
N26C25H18119.8°119.7°
C03O04C05114.2°116.6°
O04C03H8108.5°109.5°
O04C03H9108.5°109.5°
C22C21N26118.8°119.6°
C22C21N20130.4°132.1°
C21C22H15120.2°120.3°
N09C10C05121.0°120.5°
C10N09C08122.1°121.5°
C10C05O04120.2°119.7°
C10C05C06118.2°119.6°
N09C08C18115.6°119.6°
N09C08C07119.9°120.7°
C21N26C18106.0°106.9°
N26C21N20110.8°108.3°
N26C18C08128.0°126.6°
N26C18C19105.6°106.8°
C21N20C19106.5°109.5°
O04C05C06121.6°120.7°
C05C06C07120.2°118.4°
C05C06H10119.9°120.8°
C08C18C19126.0°126.6°
C18C08C07124.2°119.6°
C18C19N20111.0°108.5°
C18C19H14124.5°125.7°
C08C07C06118.5°119.2°
C08C07H11120.8°120.4°
N20C19H14124.5°125.8°
C07C06H10119.9°120.8°
C06C07H11120.7°120.4°
H1C17H2109.5°109.5°
H3C13H4109.5°109.5°
H5C14H6109.4°109.5°
H8C03H9109.5°109.5°
H12C16H13109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N15C16C17H12120.0°120.0°
N15C16C17H13120.0°120.0°
C16N15C14H19120.7°124.0°
N15C16C17C1249.9°59.2°
C16N15C14C1359.5°61.7°
N15C16C17H1170.7°60.8°
N15C16C17H270.9°179.2°
C16N15C14H5179.7°58.3°
C16N15C14H660.8°178.2°
N15C16H12H13120.0°120.0°
C17C16N15C1458.7°61.7°
C16C17C12H1120.8°120.0°
C16C17C12H2120.8°120.0°
C16C17C12C1343.3°57.6°
C16C17C12N11176.6°177.6°
C16C17H1H2117.4°120.1°
C16C17C12H769.3°62.2°
C17C16H12H13120.0°120.0°
C17C16N15H1962.0°62.3°
N15C14C13H5120.2°119.9°
N15C14C13H6120.2°120.0°
N15C14C13C1249.8°59.2°
N15C14C13H370.7°60.8°
N15C14C13H4170.5°179.2°
N15C14H5H6119.4°119.9°
C14N15C16H1261.3°178.3°
C14N15C16H13178.7°58.3°
C17C12C13C1442.6°57.6°
C17C12C13N11133.5°119.9°
C17C12C13H7112.5°119.9°
C17C12N11H7113.8°120.1°
C17C12N11C0275.4°60.0°
C17C12N11C10131.5°120.0°
C12C17H1H2117.5°120.1°
C17C12C13H378.0°62.3°
C17C12C13H4163.2°177.6°
C12C17C16H1270.1°179.2°
C12C17C16H13169.9°60.8°
C14C13C12H3120.6°120.0°
C14C13C12H4120.6°120.0°
C14C13C12N11176.1°177.6°
C14C13H3H4118.1°120.0°
C13C14H5H6119.4°120.1°
C14C13C12H769.9°62.2°
C13C14N15H1961.3°62.3°
O01C02N11C1219.9°1.8°
O01C02N11C03179.0°179.8°
O01C02N11C10171.4°178.1°
O01C02C03O04143.8°148.5°
O01C02C03H895.7°91.5°
O01C02C03H923.2°28.5°
C13C12N11H7113.7°120.2°
C13C12N11C0257.1°59.7°
C13C12N11C1096.1°120.3°
C13C12C17H1164.1°62.3°
C13C12C17H277.6°177.6°
C12C13H3H4118.2°120.1°
C12C13C14H5170.0°60.8°
C12C13C14H670.4°179.2°
C12N11C02C10151.5°180.0°
C12N11C02C03159.1°178.4°
C12N11C10N0936.5°15.4°
C12N11C10C05142.8°164.4°
N11C12C17H162.5°57.6°
N11C12C17H255.8°62.5°
N11C12C13H355.5°57.6°
N11C12C13H463.3°62.4°
C23C24C25H17180.0°179.6°
C24C23C22H16180.0°179.9°
C23C24C25N260.5°0.5°
C24C23C22C210.4°0.0°
C24C23C22H15179.6°180.0°
C23C24C25H18179.5°180.0°
C25C24C23C220.2°0.4°
C24C25N26H18180.0°179.5°
C24C25N26C211.0°0.2°
C24C25N26C18178.4°179.3°
C25C24C23H16179.8°179.7°
C23C22C21H15180.0°180.0°
C23C22C21N261.0°0.3°
C23C22C21N20179.4°180.0°
C22C23C24H17179.8°180.0°
N11C02C03O0435.3°31.2°
C02N11C10N09169.8°164.6°
C02N11C10C0510.9°15.5°
C02N11C12H7170.8°179.8°
N11C02C03H885.3°88.8°
N11C02C03H9155.9°151.2°
C03C02N11C107.6°1.6°
C02C03O04H8120.5°120.0°
C02C03O04H9120.6°120.0°
C02C03O04C0544.9°46.1°
C02C03H8H9118.2°119.9°
N11C10N09C05179.3°179.9°
N11C10N09C08178.7°179.9°
N11C10C05O040.4°0.2°
N11C10C05C06178.9°179.9°
C10N11C12H717.6°0.1°
C25N26C21C221.3°0.2°
C25N26C21C18179.6°179.6°
C25N26C21N20180.0°180.0°
C25N26C18C086.0°0.3°
C25N26C18C19178.8°180.0°
N26C25C24H17179.6°179.9°
C03O04C05C1028.3°32.6°
C03O04C05C06152.4°147.3°
O04C03H8H9118.2°120.0°
C22C21N26N20178.7°179.8°
C22C21N26C18178.3°179.8°
C22C21N20C19179.6°180.0°
C21C22C23H16179.5°180.0°
N09C10C05O04179.7°179.9°
N09C10C05C060.4°0.0°
C10N09C08C18177.3°180.0°
C10N09C08C073.8°0.0°
C05C10N09C082.0°0.0°
C10C05O04C06179.3°179.9°
C10C05C06C070.9°0.0°
C10C05C06H10179.1°180.0°
N09C08C18N263.9°171.9°
N09C08C18C07173.2°180.0°
N09C08C18C19167.5°7.7°
N09C08C07C063.1°0.0°
N09C08C07H11176.9°180.0°
C21N26C18C08174.4°179.8°
C21N26C18C191.7°0.4°
N26C21N20C191.1°0.2°
N26C21C22H15179.0°179.7°
C21N26C25H18178.9°179.7°
C18N26C21N200.4°0.4°
N26C18C08C19171.3°179.7°
N26C18C08C07177.1°8.1°
N26C18C19N202.4°0.3°
N26C18C19H14177.5°179.8°
C18N26C25H181.6°0.2°
C21N20C19C182.2°0.0°
C21N20C19H14177.8°180.0°
N20C21C22H150.6°0.0°
O04C05C06C07179.8°179.9°
C05O04C03H875.7°73.9°
C05O04C03H9165.5°166.1°
O04C05C06H100.2°0.1°
C05C06C07C080.8°0.0°
C05C06C07H10180.0°180.0°
C05C06C07H11179.2°180.0°
C08C18C19N20175.4°180.0°
C18C08C07C06176.1°180.0°
C18C08C07H113.9°0.0°
C08C18C19H144.6°0.1°
C19C18C08C075.8°172.2°
C18C19N20H14180.0°179.9°
C08C07C06H11180.0°180.0°
C08C07C06H10179.2°180.0°
H1C17C12H751.5°177.8°
H1C17C16H1250.7°59.2°
H1C17C16H1369.3°179.2°
H2C17C12H7169.9°57.7°
H2C17C16H12169.1°60.9°
H2C17C16H1349.1°59.1°
H3C13C14H549.5°179.3°
H3C13C14H6169.0°59.2°
H3C13C12H7169.5°177.8°
H4C13C14H569.3°59.3°
H4C13C14H650.3°60.8°
H4C13C12H750.7°57.8°
H5C14N15H1959.0°177.7°
H6C14N15H19178.5°57.7°
H10C06C07H110.8°0.0°
H12C16N15H19178.0°57.7°
H13C16N15H1958.0°177.6°
H15C22C23H160.5°0.0°
H16C23C24H170.2°0.0°
H17C24C25H180.5°0.4°

251174

PDB entries from 2026-03-25

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