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X5D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O29P40doub1.48Å1.51Å
O37P40sing1.61Å1.62Å
P40O31sing1.61Å1.63Å
P40O35sing1.61Å1.62Å
C10C18sing1.53Å1.51Å
C10C14sing1.53Å1.52Å
O31C12sing1.43Å1.43Å
C12C14sing1.53Å1.51Å
O35C17sing1.43Å1.42Å
O39C18sing1.43Å1.43Å
O39C6sing1.35Å1.37Å
C1C6sing1.39Å1.37ÅAromatic
C1C2doub1.38Å1.38ÅAromatic
C18C11sing1.53Å1.49Å
C14C15sing1.53Å1.50Å
N27C9sing1.37Å1.37Å
C6N22doub1.33Å1.34ÅAromatic
C2N21sing1.32Å1.34ÅAromatic
C9N24doub1.32Å1.30Å
C9N26sing1.36Å1.37Å
N22C3sing1.32Å1.33ÅAromatic
N24C7sing1.34Å1.35Å
N26C8sing1.35Å1.38Å
N21C3doub1.32Å1.33ÅAromatic
C17C19sing1.55Å1.51Å
C17C20sing1.54Å1.50Å
O36C19sing1.43Å1.43Å
C15C11sing1.53Å1.51Å
C15O34sing1.43Å1.41Å
C7C5doub1.40Å1.37ÅAromatic
C7N25sing1.37Å1.37ÅAromatic
C8O28doub1.22Å1.23Å
C8C5sing1.42Å1.43Å
C19C16sing1.54Å1.50Å
C20N25sing1.47Å1.45Å
C20O33sing1.43Å1.42Å
C5N23sing1.35Å1.37ÅAromatic
N25C4sing1.36Å1.37ÅAromatic
O34P41sing1.61Å1.62Å
N23C4doub1.30Å1.31ÅAromatic
C16O33sing1.43Å1.43Å
C16C13sing1.53Å1.51Å
O32P41sing1.61Å1.64Å
O32C13sing1.43Å1.42Å
P41O38doub1.48Å1.63Å
P41O30sing1.61Å1.52Å
C4H1sing1.08Å1.08Å
C10H2sing1.09Å1.10Å
C10H3sing1.09Å1.10Å
C13H4sing1.09Å1.10Å
C13H5sing1.09Å1.10Å
C15H6sing1.09Å1.10Å
C17H7sing1.09Å1.10Å
C20H8sing1.09Å1.10Å
C1H9sing1.08Å1.08Å
C2H10sing1.08Å1.08Å
C3H11sing1.08Å1.08Å
C11H12sing1.09Å1.10Å
C11H13sing1.09Å1.10Å
C12H14sing1.09Å1.10Å
C12H15sing1.09Å1.10Å
C14H16sing1.09Å1.10Å
C16H17sing1.09Å1.10Å
C18H18sing1.09Å1.10Å
C19H19sing1.09Å1.10Å
N26H20sing0.97Å1.00Å
N27H21sing0.97Å1.00Å
N27H22sing0.97Å1.00Å
O30H23sing0.97Å0.95Å
O36H24sing0.97Å0.95Å
O37H25sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O29P40O37115.4°109.4°
O29P40O31111.3°109.5°
O29P40O35113.4°109.4°
O37P40O31106.9°109.5°
O37P40O35102.8°109.5°
P40O37H25109.5°114.0°
O31P40O35106.3°109.4°
P40O31C12118.2°123.2°
P40O35C17120.3°122.7°
C18C10C14106.3°107.7°
C10C18O39109.2°109.8°
C10C18C11103.5°108.2°
C18C10H2110.2°109.8°
C18C10H3110.2°109.8°
C10C18H18111.3°109.7°
C10C14C12113.0°109.8°
C10C14C15104.4°107.7°
C14C10H2110.2°109.8°
C14C10H3110.3°109.9°
C10C14H16108.3°109.6°
O31C12C14108.6°109.6°
O31C12H14109.7°109.5°
O31C12H15109.7°109.5°
C12C14C15114.1°109.9°
C14C12H14109.7°109.4°
C14C12H15109.7°109.5°
C12C14H16108.4°110.0°
O35C17C19111.0°110.4°
O35C17C20112.7°110.9°
O35C17H7111.1°110.5°
C18O39C6118.3°117.0°
O39C18C11108.4°109.7°
O39C18H18112.5°109.7°
O39C6C1118.2°120.5°
O39C6N22117.0°120.5°
C6C1C2114.2°118.3°
C1C6N22124.8°119.0°
C6C1H9122.9°120.8°
C1C2N21124.0°119.2°
C2C1H9122.9°120.9°
C1C2H10118.0°120.4°
C18C11C15101.5°107.6°
C18C11H12111.5°109.8°
C18C11H13111.4°109.9°
C11C18H18111.5°109.7°
C14C15C11102.8°107.7°
C14C15O34108.7°109.9°
C14C15H6111.0°109.9°
C15C14H16108.5°109.8°
N27C9N24124.2°119.0°
N27C9N26113.7°119.1°
C9N27H21120.0°120.0°
C9N27H22120.0°120.0°
C6N22C3115.2°120.7°
C2N21C3115.5°121.0°
N21C2H10118.0°120.4°
N24C9N26122.0°121.9°
C9N24C7113.0°121.1°
C9N26C8127.9°120.4°
C9N26H20116.0°119.8°
N22C3N21126.2°121.8°
N22C3H11116.9°119.1°
N24C7C5128.6°119.7°
N24C7N25127.1°134.2°
N26C8O28126.7°120.8°
N26C8C5109.7°118.3°
C8N26H20116.0°119.8°
N21C3H11116.9°119.1°
C19C17C20102.0°104.6°
C17C19O36109.3°110.4°
C17C19C16102.6°104.2°
C19C17H7109.8°110.0°
C17C19H19111.4°110.5°
C17C20N25114.0°109.8°
C17C20O33105.4°108.1°
C20C17H7109.9°110.4°
C17C20H8108.6°109.8°
O36C19C16108.7°110.5°
O36C19H19112.7°110.6°
C19O36H24109.5°114.0°
C11C15O34110.5°109.8°
C11C15H6111.0°109.7°
C15C11H12111.4°109.8°
C15C11H13111.5°109.8°
C15O34P41122.5°122.9°
O34C15H6112.4°109.8°
C5C7N25104.3°106.1°
C7C5C8118.7°118.6°
C7C5N23111.9°107.3°
C7N25C20126.9°126.2°
C7N25C4107.5°107.5°
O28C8C5123.6°120.8°
C8C5N23129.4°134.1°
C19C16O33106.0°107.4°
C19C16C13113.9°109.1°
C19C16H17107.9°110.0°
C16C19H19111.6°110.5°
N25C20O33109.6°109.7°
C20N25C4125.7°126.3°
N25C20H8109.4°109.7°
C20O33C16110.3°111.7°
O33C20H8109.8°109.7°
C5N23C4104.5°109.3°
N25C4N23111.9°109.8°
N25C4H1124.1°125.1°
O34P41O32109.1°109.5°
O34P41O38103.9°109.4°
O34P41O30108.7°109.5°
N23C4H1124.0°125.1°
O33C16C13112.4°109.8°
O33C16H17108.8°110.5°
C16C13O32113.9°109.2°
C16C13H4108.4°109.5°
C16C13H5108.4°109.6°
C13C16H17107.7°110.1°
P41O32C13120.1°123.0°
O32P41O38103.1°109.5°
O32P41O30113.3°109.5°
O32C13H4108.4°109.5°
O32C13H5108.4°109.5°
O38P41O30118.1°109.4°
P41O30H23109.5°113.9°
H2C10H3109.5°109.8°
H4C13H5109.4°109.5°
H12C11H13109.5°109.8°
H14C12H15109.5°109.4°
H21N27H22120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O29P40O37O31124.4°120.1°
O29P40O37O35123.9°119.9°
O29P40O31O35123.9°120.0°
O29P40O31C1243.2°157.4°
O29P40O35C17141.1°137.9°
O29P40O37H250.0°60.1°
O37P40O31O35109.3°120.0°
O37P40O31C12170.0°37.4°
O37P40O35C1793.7°102.2°
P40O31C12C14175.6°172.6°
O31P40O35C1718.5°17.8°
P40O31C12H1464.5°52.6°
P40O31C12H1555.8°67.3°
O31P40O37H25124.4°60.0°
O35P40O31C1280.7°82.6°
P40O35C17C19121.1°100.5°
P40O35C17C20125.2°144.1°
P40O35C17H71.4°21.4°
O35P40O37H25123.9°180.0°
C18C10C14H2119.5°119.5°
C18C10C14H3119.5°119.6°
C18C10C14C12131.9°128.4°
C10C18O39C11112.1°118.7°
C10C18O39H18124.1°120.6°
C10C18O39C6162.7°150.0°
C10C18C11H18119.7°119.7°
C18C10C14C157.3°8.7°
C10C18C11C1541.2°3.8°
C18C10H2H3121.4°120.9°
C10C18C11H1277.5°123.3°
C10C18C11H13159.9°115.8°
C18C10C14H16108.1°110.7°
C10C14C12O3166.9°114.6°
C10C14C12C15119.1°118.3°
C10C14C12H16120.0°120.7°
C14C10C18O3994.2°122.8°
C14C10C18C1121.1°3.0°
C10C14C15H16115.3°119.3°
C10C14C15C1132.8°11.1°
C10C14C15O34150.0°130.7°
C14C10H2H3121.5°120.9°
C10C14C15H685.9°108.4°
C10C14C12H14173.2°125.4°
C10C14C12H1553.0°5.5°
C14C10C18H18141.0°116.6°
O31C12C14H14119.9°120.0°
O31C12C14H15119.9°120.1°
O31C12C14C1552.2°127.1°
O31C12H14H15120.4°119.9°
O31C12C14H16173.1°6.2°
C12C14C15H16120.9°121.0°
C12C14C15C11156.6°130.7°
C12C14C15O3486.2°109.6°
C12C14C10H212.4°112.1°
C12C14C10H3108.7°8.9°
C12C14C15H637.9°11.3°
C14C12H14H15120.4°119.9°
O35C17C19C20120.3°119.3°
O35C17C19H7123.2°122.2°
O35C17C20H7124.5°122.8°
O35C17C19O3641.3°19.9°
O35C17C19C16156.6°138.6°
O35C17C20N2588.1°108.3°
O35C17C20O33151.7°132.1°
O35C17C20H834.1°12.4°
O35C17C19H1983.8°102.7°
C18O39C6C1168.6°179.8°
O39C18C11H18124.4°120.6°
C18O39C6N2211.0°0.0°
O39C18C11C1574.7°115.9°
O39C18C10H225.3°117.7°
O39C18C10H3146.3°3.2°
O39C18C11H12166.6°3.6°
O39C18C11H1344.0°124.5°
O39C6C1N22179.6°179.8°
O39C6C1C2179.6°179.7°
C6O39C18C1185.2°91.3°
O39C6N22C3179.7°179.7°
O39C6C1H90.4°0.3°
C6O39C18H1838.6°29.4°
C6C1C2H9180.0°180.0°
C6C1C2N210.1°0.0°
C1C6N22C30.1°0.0°
C6C1C2H10180.0°180.0°
C2C1C6N220.0°0.0°
C1C2N21H10180.0°179.9°
C1C2N21C30.0°0.0°
C18C11C15C1446.2°9.2°
C18C11C15H12118.7°119.5°
C18C11C15H13118.7°119.6°
C18C11C15O34162.0°128.9°
C11C18C10H2140.6°122.6°
C11C18C10H398.4°116.5°
C18C11C15H672.6°110.4°
C18C11H12H13123.7°121.0°
C14C15C11O34115.8°119.7°
C14C15C11H6118.8°119.6°
C14C15O34H6123.3°121.0°
C14C15O34P41160.1°132.8°
C15C14C10H2112.1°128.3°
C15C14C10H3126.8°110.8°
C14C15C11H1272.5°128.7°
C14C15C11H13164.9°110.4°
C15C14C12H1467.7°7.1°
C15C14C12H15172.0°112.8°
N27C9N24N26179.8°180.0°
N27C9N24C7179.9°180.0°
N27C9N26C8179.8°180.0°
N27C9N26H200.2°0.1°
C9N27H21H22180.0°180.0°
C6N22C3N210.1°0.0°
N22C6C1H9180.0°180.0°
C6N22C3H11179.9°179.9°
C2N21C3N220.1°0.0°
N21C2C1H9179.9°180.0°
C2N21C3H11179.9°179.9°
N24C9N26C80.0°0.0°
C9N24C7C50.0°0.0°
C9N24C7N25180.0°180.0°
N24C9N26H20180.0°180.0°
N24C9N27H210.0°0.0°
N24C9N27H22180.0°180.0°
N26C9N24C70.0°0.1°
C9N26C8H20180.0°179.9°
C9N26C8O28179.8°180.0°
C9N26C8C50.1°0.1°
N26C9N27H21179.8°179.9°
N26C9N27H220.1°0.0°
N22C3N21H11180.0°179.9°
N24C7C5N25180.0°180.0°
N24C7C5C80.0°0.1°
N24C7N25C200.3°0.0°
N24C7C5N23180.0°180.0°
N24C7N25C4180.0°179.9°
N26C8C5C70.1°0.2°
N26C8O28C5179.7°179.9°
N26C8C5N23180.0°180.0°
C3N21C2H10180.0°180.0°
C19C17C20H7116.4°118.3°
C17C19O36C16111.3°114.8°
C17C19O36H19124.4°122.6°
C17C19C16H19119.4°118.7°
C19C17C20N25152.8°132.8°
C19C17C20O3332.6°13.1°
C17C19C16O3327.6°19.3°
C17C19C16C1396.4°99.6°
C19C17C20H885.0°106.5°
C17C19C16H17144.0°139.5°
C17C19O36H24180.0°180.0°
C20C17C19O3678.9°99.4°
C17C20N25C7116.2°85.0°
C20C17C19C1636.3°19.3°
C17C20N25O33117.8°118.6°
C17C20N25H8121.8°120.7°
C17C20O33H8116.8°119.7°
C17C20N25C464.1°95.2°
C17C20O33C1616.1°1.0°
C20C17C19H19155.9°138.0°
O36C19C16H19124.9°122.7°
O36C19C16O3388.1°99.3°
O36C19C16C13147.9°141.8°
O36C19C17H7164.6°142.1°
O36C19C16H1728.3°20.9°
C11C15O34H6124.6°120.7°
C11C15O34P4187.8°108.9°
C15C11H12H13123.7°120.9°
C11C15C14H1682.5°108.2°
C15C11C18H18160.9°123.5°
C15O34P41O3279.4°107.7°
C15O34P41O3830.0°12.3°
C15O34P41O30156.5°132.3°
O34C15C11H1243.3°111.6°
O34C15C11H1379.3°9.3°
O34C15C14H1634.7°11.4°
C7C5C8O28179.8°179.9°
C7C5C8N23179.9°179.9°
C5C7N25C20179.7°180.0°
C5C7N25C40.0°0.2°
C7C5N23C40.0°0.1°
N25C7C5C8180.0°179.9°
C7N25C20C4179.7°179.8°
C7N25C20O33126.0°156.4°
N25C7C5N230.0°0.0°
C7N25C4N230.0°0.3°
C7N25C4H1180.0°179.9°
C7N25C20H85.6°35.7°
O28C8C5N230.2°0.1°
O28C8N26H200.2°0.1°
C8C5N23C4179.9°180.0°
C5C8N26H20179.9°179.9°
C19C16O33C207.5°11.7°
C19C16O33C13124.9°118.5°
C19C16O33H17115.8°119.9°
C19C16C13H17119.7°120.8°
C19C16C13O3273.3°9.5°
C19C16C13H4166.0°110.4°
C19C16C13H547.3°129.4°
C16C19C17H780.2°99.2°
C16C19O36H2468.7°65.3°
N25C20O33H8120.1°120.6°
C20N25C4N23179.7°179.9°
N25C20O33C16139.2°120.7°
C20N25C4H10.3°0.2°
N25C20C17H736.4°14.5°
O33C20N25C453.7°23.4°
C20O33C16C13117.5°106.8°
O33C20C17H783.8°105.1°
C20O33C16H17123.3°131.6°
C5N23C4N250.0°0.3°
C5N23C4H1180.0°179.9°
N25C4N23H1180.0°179.6°
C4N25C20H8174.1°144.1°
O34P41O32O38110.0°120.0°
O34P41O32O30121.2°120.0°
O34P41O32C1386.2°151.0°
O34P41O38O30120.4°120.0°
P41O34C15H636.8°11.8°
O34P41O30H23117.9°180.0°
O33C16C13H17119.8°121.8°
O33C16C13O3247.2°126.9°
O33C16C13H473.5°7.0°
O33C16C13H5167.8°113.2°
C16O33C20H8100.7°118.7°
O33C16C19H19147.0°138.0°
C16C13O32P41146.5°140.7°
C16C13O32H4120.7°119.9°
C16C13O32H5120.7°120.0°
C16C13H4H5118.0°120.2°
C13C16C19H1923.0°19.1°
O32P41O38O30125.8°120.0°
P41O32C13H492.8°20.8°
P41O32C13H525.9°99.3°
O32P41O30H23120.7°60.0°
C13O32P41O38163.8°31.1°
C13O32P41O3035.0°88.9°
O32C13H4H5118.0°120.0°
O32C13C16H17167.0°111.3°
O38P41O30H230.0°60.1°
H2C10C14H16132.4°8.9°
H2C10C18H1899.5°2.9°
H3C10C14H1611.4°129.8°
H3C10C18H1821.5°123.8°
H4C13C16H1746.3°128.8°
H5C13C16H1772.3°8.7°
H6C15C11H12168.7°9.1°
H6C15C11H1346.1°130.0°
H6C15C14H16158.8°132.3°
H7C17C20H8158.6°135.2°
H7C17C19H1939.4°19.5°
H9C1C2H100.0°0.0°
H12C11C18H1842.2°117.0°
H13C11C18H1880.4°3.9°
H14C12C14H1653.2°113.9°
H15C12C14H1667.0°126.2°
H17C16C19H1996.5°101.8°
H19C19O36H2455.6°57.4°

251801

PDB entries from 2026-04-08

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