Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

WY8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N37C36sing1.36Å1.35Å
N37C38sing1.35Å1.38Å
C36N35doub1.30Å1.30Å
O39C38doub1.22Å1.23Å
C38C33sing1.42Å1.43Å
N35C34sing1.34Å1.35Å
C33C34doub1.40Å1.37ÅAromatic
C33N32sing1.35Å1.38ÅAromatic
C34N30sing1.37Å1.37ÅAromatic
N32C31doub1.30Å1.31ÅAromatic
N30C31sing1.36Å1.37ÅAromatic
N30C29sing1.46Å1.47Å
C29C28sing1.54Å1.52Å
C29C40sing1.54Å1.50Å
C28C3sing1.54Å1.55Å
F1C1sing1.38Å1.40Å
O41C40sing1.42Å1.44Å
O41P42sing1.61Å1.56Å
C40C1sing1.54Å1.52Å
N6C6sing1.38Å1.33Å
C3C1sing1.55Å1.54Å
C3C7sing1.52Å1.51Å
O44P42doub1.48Å1.47Å
P42S43sing2.12Å2.07Å
P42O11sing1.61Å1.56Å
N7C5sing1.35Å1.39ÅAromatic
N7C8doub1.30Å1.31ÅAromatic
C6C5doub1.41Å1.40ÅAromatic
C6N1sing1.33Å1.35ÅAromatic
C7O5sing1.44Å1.44Å
C5C4sing1.40Å1.38ÅAromatic
C8N9sing1.36Å1.37ÅAromatic
O11C10sing1.43Å1.44Å
N1C2doub1.32Å1.34ÅAromatic
O5P6sing1.61Å1.56Å
C4N9sing1.37Å1.37ÅAromatic
C4N3doub1.33Å1.33ÅAromatic
O27P6doub1.48Å1.48Å
N9C13sing1.46Å1.45Å
C2N3sing1.32Å1.34ÅAromatic
C10C9sing1.53Å1.51Å
P6O7sing1.61Å1.56Å
P6S26sing2.12Å2.08Å
C11C9sing1.53Å1.52Å
C11C24sing1.54Å1.52Å
C11O7sing1.42Å1.44Å
C9O12sing1.43Å1.44Å
C13O12sing1.43Å1.42Å
C13C24sing1.54Å1.52Å
C24F25sing1.40Å1.40Å
C10H1sing1.09Å1.10Å
C10H4sing1.09Å1.10Å
C13H3sing1.09Å1.10Å
C8H8sing1.08Å1.08Å
C1H5sing1.09Å1.10Å
C2H2sing1.08Å1.08Å
C24H7sing1.08Å1.10Å
C28H6sing1.09Å1.10Å
C28H9sing1.08Å1.10Å
C29H10sing1.09Å1.10Å
C3H11sing1.09Å1.10Å
C31H12sing1.08Å1.08Å
C36H13sing1.08Å1.08Å
C7H14sing1.09Å1.10Å
C7H15sing1.09Å1.10Å
C40H16sing1.08Å1.10Å
C11H17sing1.09Å1.10Å
C9H18sing1.09Å1.10Å
N6HN61sing0.97Å1.00Å
N6HN62sing0.97Å1.00Å
N37H21sing0.97Å1.00Å
S26H22sing1.34Å1.30Å
S43H23sing1.34Å1.30Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C36N37C38124.6°120.4°
N37C36N35125.3°122.2°
N37C36H13117.4°118.9°
C36N37H21117.7°119.8°
N37C38O39120.7°120.9°
N37C38C33111.6°118.2°
C38N37H21117.7°119.8°
C36N35C34112.4°121.2°
N35C36H13117.3°118.9°
O39C38C33127.7°120.9°
C38C33C34118.6°118.4°
C38C33N32131.0°134.3°
N35C34C33127.4°119.6°
N35C34N30126.4°134.3°
C34C33N32110.4°107.3°
C33C34N30106.1°106.1°
C33N32C31104.4°109.3°
C34N30C31106.1°107.5°
C34N30C29124.8°126.3°
N32C31N30113.0°109.8°
N32C31H12123.5°125.1°
C31N30C29129.0°126.3°
N30C31H12123.5°125.1°
N30C29C28115.7°110.0°
N30C29C40113.7°109.5°
N30C29H10109.8°110.7°
C28C29C4098.2°107.3°
C29C28C3103.1°105.2°
C29C28H6111.0°109.6°
C29C28H9111.0°110.0°
C28C29H10109.3°109.9°
C29C40O41107.7°109.3°
C29C40C198.2°104.8°
C40C29H10109.5°109.5°
C29C40H16112.2°110.4°
C28C3C1103.7°103.8°
C28C3C7113.5°112.6°
C3C28H6111.0°110.1°
C3C28H9111.1°110.5°
C28C3H11108.7°108.8°
F1C1C40109.2°112.1°
F1C1C3114.1°110.7°
F1C1H5111.8°111.4°
C40O41P42120.8°125.0°
O41C40C1112.5°109.3°
O41C40H16113.3°112.2°
O41P42O44106.3°109.6°
O41P42S43106.1°109.4°
O41P42O11105.8°109.7°
C40C1C3101.5°103.0°
C40C1H5110.0°109.9°
C1C40H16111.9°110.6°
N6C6C5120.8°120.8°
N6C6N1120.5°120.8°
C6N6HN61109.5°120.1°
C6N6HN62109.4°120.0°
C1C3C7112.7°110.5°
C3C1H5109.8°109.4°
C1C3H11108.9°109.2°
C3C7O5114.6°108.8°
C7C3H11109.1°111.6°
C3C7H14108.2°110.1°
C3C7H15108.1°110.4°
O44P42S43114.1°109.3°
O44P42O11114.6°109.5°
S43P42O11109.3°109.3°
P42S43H23102.0°103.0°
P42O11C10117.6°123.5°
C5N7C8103.7°109.4°
N7C5C6132.7°134.6°
N7C5C4110.7°107.2°
N7C8N9114.0°110.0°
N7C8H8123.0°125.0°
C5C6N1118.7°118.4°
C6C5C4116.5°118.2°
C6N1C2118.1°121.2°
C7O5P6117.9°122.5°
O5C7H14108.2°109.1°
O5C7H15108.2°109.0°
C5C4N9105.8°106.0°
C5C4N3126.7°119.1°
C8N9C4105.7°107.4°
C8N9C13127.7°126.3°
N9C8H8123.0°125.0°
O11C10C9110.9°109.5°
O11C10H1109.1°109.7°
O11C10H4109.1°109.4°
N1C2N3128.8°122.4°
N1C2H2115.6°118.8°
O5P6O27111.8°109.3°
O5P6O7102.8°110.1°
O5P6S26112.9°109.5°
N9C4N3127.5°134.9°
C4N9C13126.5°126.3°
C4N3C2111.3°120.7°
O27P6O7111.4°109.3°
O27P6S26110.2°109.2°
N9C13O12108.2°109.8°
N9C13C24113.2°110.0°
N9C13H3109.8°109.7°
N3C2H2115.6°118.8°
C10C9C11115.2°110.5°
C10C9O12109.4°109.3°
C9C10H1109.1°109.7°
C9C10H4109.1°109.5°
C10C9H18108.9°109.3°
O7P6S26107.5°109.4°
P6O7C11120.3°124.9°
P6S26H22102.0°103.0°
C9C11C24102.5°104.4°
C9C11O7108.1°111.4°
C11C9O12104.8°108.3°
C9C11H17111.7°110.9°
C11C9H18108.7°110.4°
C24C11O7109.3°109.5°
C11C24C13103.4°103.6°
C11C24F25109.9°110.0°
C11C24H7110.7°110.5°
C24C11H17111.7°109.7°
O7C11H17113.0°110.7°
C9O12C13111.2°110.7°
O12C9H18109.8°109.1°
O12C13C24106.4°107.7°
O12C13H3110.3°109.7°
C13C24F25109.3°110.4°
C24C13H3108.8°109.9°
C13C24H7110.6°111.0°
F25C24H7112.6°111.1°
H1C10H4109.4°109.0°
H6C28H9109.5°111.3°
H14C7H15109.5°109.5°
HN61N6HN62109.5°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C36N37C38H21180.0°180.0°
N37C36N35H13180.0°180.0°
C36N37C38O39178.9°180.0°
C36N37C38C330.3°0.1°
N37C36N35C340.1°0.0°
C38N37C36N350.2°0.0°
N37C38O39C33179.0°179.9°
N37C38C33C340.1°0.1°
N37C38C33N32179.2°180.0°
C38N37C36H13179.8°179.9°
C36N35C34C330.3°0.0°
C36N35C34N30179.2°180.0°
N35C36N37H21179.8°180.0°
O39C38C33C34179.0°180.0°
O39C38C33N321.7°0.1°
O39C38N37H211.1°0.1°
C38C33C34N350.2°0.0°
C38C33C34N32179.4°180.0°
C38C33C34N30179.3°179.9°
C38C33N32C31179.3°179.8°
C33C38N37H21179.8°180.0°
N35C34C33N30179.6°180.0°
N35C34C33N32179.6°180.0°
N35C34N30C31179.7°179.8°
N35C34N30C294.3°0.2°
C34N35C36H13179.9°180.0°
C34C33N32C310.0°0.2°
C33C34N30C310.1°0.1°
C33C34N30C29175.2°179.9°
N32C33C34N300.1°0.0°
C33N32C31N300.1°0.2°
C33N32C31H12179.9°179.9°
C34N30C31N320.1°0.2°
C34N30C31C29175.1°180.0°
C34N30C29C28140.4°121.4°
C34N30C29C40107.1°120.9°
C34N30C29H1016.1°0.2°
C34N30C31H12179.8°179.9°
N32C31N30H12180.0°179.7°
N32C31N30C29175.0°179.7°
C31N30C29C2845.4°58.6°
C31N30C29C4067.2°59.1°
C31N30C29H10169.7°179.8°
N30C29C28C40121.3°119.0°
N30C29C28H10124.6°122.0°
N30C29C40H10123.3°121.5°
N30C29C28C3165.0°128.6°
N30C29C40O4162.0°139.0°
N30C29C40C1178.9°103.9°
N30C29C28H646.0°10.2°
N30C29C28H976.0°112.5°
C29N30C31H125.1°0.0°
N30C29C40H1663.3°15.1°
C28C29C40H10113.9°119.2°
C29C28C3H6119.0°118.0°
C29C28C3H9119.0°118.6°
C28C29C40O41175.2°101.7°
C28C29C40C158.3°15.4°
C29C28C3C112.6°30.7°
C29C28C3C7135.2°150.2°
C29C28H6H9122.9°121.8°
C29C28C3H11103.1°85.5°
C28C29C40H1659.5°134.4°
C40C29C28C343.7°9.5°
C29C40C1F170.3°153.2°
C29C40O41C1107.1°114.2°
C29C40O41H16124.7°122.8°
C29C40O41P42156.6°168.0°
C29C40C1H16118.0°118.9°
C29C40C1C350.6°34.1°
C29C40C1H5166.7°82.3°
C40C29C28H675.3°108.8°
C40C29C28H9162.7°128.5°
C28C3C1F194.4°160.3°
C28C3C1C4022.9°40.2°
C28C3C1C7123.2°120.9°
C28C3C1H11115.6°116.0°
C28C3C7H11121.4°122.8°
C28C3C7O595.7°176.2°
C28C3C1H5139.2°76.6°
C3C28H6H9123.0°122.9°
C3C28C29H1070.4°109.4°
C28C3C7H1425.0°64.3°
C28C3C7H15143.5°56.7°
F1C1C40O4142.8°36.1°
F1C1C40C3120.8°119.0°
F1C1C40H5123.0°124.5°
F1C1C3H5126.4°123.2°
F1C1C3C7142.4°78.8°
F1C1C3H1121.1°44.3°
F1C1C40H16171.7°87.9°
O41C40C1H16128.8°124.0°
O41C40C1C3163.7°82.9°
C40O41P42O44145.4°30.1°
C40O41P42S4392.8°149.9°
C40O41P42O1123.3°90.1°
O41C40C1H580.1°160.6°
O41C40C29H1061.3°17.5°
P42O41C40C196.3°53.8°
O41P42O44S43116.5°119.9°
O41P42O44O11116.5°120.4°
O41P42S43O11113.7°120.2°
O41P42O11C10129.9°135.2°
P42O41C40H1631.9°69.3°
O41P42S43H23116.6°180.0°
C40C1C3H5116.3°116.8°
C40C1C3C7100.3°161.2°
C1C40C29H1055.6°134.6°
C40C1C3H11138.4°75.7°
N6C6C5N71.5°0.4°
N6C6C5N1175.9°179.9°
N6C6C5C4175.2°180.0°
N6C6N1C2175.5°180.0°
C6N6HN61HN62120.0°180.0°
C1C3C7H11121.1°121.7°
C1C3C7O521.7°68.3°
C1C3C28H6106.3°87.3°
C1C3C28H9131.6°149.4°
C1C3C7H14142.5°51.2°
C1C3C7H1599.0°172.2°
C3C1C40H1667.5°153.1°
C3C7O5H14120.7°120.1°
C3C7O5H15120.7°120.4°
C3C7O5P6148.2°88.8°
C7C3C1H516.0°44.3°
C7C3C28H616.3°32.2°
C7C3C28H9105.8°91.2°
C3C7H14H15117.6°121.6°
O44P42S43O11129.7°119.8°
O44P42O11C10113.4°14.9°
O44P42S43H230.0°60.0°
S43P42O11C1016.1°104.8°
P42O11C10C9179.3°172.5°
P42O11C10H159.1°52.0°
P42O11C10H460.4°67.5°
O11P42S43H23129.7°59.8°
N7C5C6C4176.7°179.6°
N7C5C6N1177.4°179.5°
C5N7C8N90.0°0.0°
N7C5C4N90.2°0.4°
N7C5C4N3178.3°179.7°
C5N7C8H8180.0°179.8°
C8N7C5C6176.7°179.9°
C8N7C5C40.2°0.2°
N7C8N9H8180.0°179.8°
N7C8N9C40.1°0.2°
N7C8N9C13178.0°179.8°
C5C6N1C20.4°0.1°
C6C5C4N9177.2°179.9°
C6C5C4N30.8°0.0°
C5C6N6HN61175.9°0.1°
C5C6N6HN6255.9°179.9°
N1C6C5C40.7°0.1°
C6N1C2N30.2°0.0°
C6N1C2H2179.8°180.0°
N1C6N6HN610.0°180.0°
N1C6N6HN62120.0°0.0°
C7O5P6O2744.4°78.0°
C7O5P6O7163.9°161.9°
C7O5P6S2680.5°41.6°
O5C7C3H11142.9°53.4°
O5C7H14H15117.7°119.1°
C5C4N9C80.2°0.3°
C5C4N9N3178.0°180.0°
C5C4N9C13178.0°179.7°
C5C4N3C20.6°0.0°
C8N9C4C13178.2°180.0°
C8N9C4N3178.2°179.7°
C8N9C13O1221.5°23.6°
C8N9C13C2496.2°94.8°
C8N9C13H3141.9°144.2°
O11C10C9H1120.2°120.5°
O11C10C9H4120.2°119.9°
O11C10C9C1150.4°118.5°
O11C10C9O1267.3°122.4°
O11C10H1H4119.3°119.8°
O11C10C9H18172.8°3.1°
N1C2N3C40.2°0.0°
N1C2N3H2180.0°180.0°
O5P6O27O7114.4°120.6°
O5P6O27S26126.4°119.8°
O5P6O7S26119.3°120.4°
O5P6O7C1171.1°36.9°
P6O5C7H1427.5°151.0°
P6O5C7H1591.1°31.6°
O5P6S26H22125.8°59.6°
N9C4N3C2177.0°180.0°
C4N9C13O12156.3°156.4°
C4N9C13C2486.0°85.2°
C4N9C13H335.8°35.8°
C4N9C8H8179.9°180.0°
N3C4N9C130.1°0.3°
C4N3C2H2179.7°180.0°
O27P6O7S26120.8°119.6°
O27P6O7C1148.8°156.9°
O27P6S26H220.0°60.0°
N9C13C24C1196.5°142.5°
N9C13O12C9119.9°135.2°
N9C13O12C24121.9°119.8°
N9C13O12H3120.2°120.7°
N9C13C24H3122.4°120.9°
N9C13C24F25146.5°99.7°
C13N9C8H82.0°0.0°
N9C13C24H722.1°23.9°
C10C9C11O12120.2°119.7°
C10C9C11H18122.5°121.0°
C10C9C11C24152.3°106.6°
C10C9C11O792.4°135.3°
C10C9O12H18119.4°119.4°
C10C9O12C13143.3°121.7°
C9C10H1H4119.4°119.9°
C10C9C11H1732.6°11.5°
P6O7C11C9146.3°78.7°
P6O7C11C24102.9°166.3°
P6O7C11H1722.1°45.2°
O7P6S26H22121.6°179.6°
S26P6O7C11169.6°83.5°
C9C11C24O7114.5°119.4°
C9C11C24H17119.8°118.9°
C9C11O7H17124.2°123.9°
C11C9O12H18116.6°120.1°
C11C9O12C1319.2°1.3°
C9C11C24C1332.9°21.2°
C9C11C24F2583.7°139.3°
C11C9C10H169.8°1.9°
C11C9C10H4170.6°121.5°
C9C11C24H7151.3°97.7°
C24C11O7H17125.0°121.1°
C24C11C9O1232.1°13.1°
C11C24C13O1222.3°22.8°
C11C24C13F25117.0°117.8°
C11C24C13H7118.5°118.6°
C11C24F25H7123.9°122.6°
C11C24C13H3141.1°96.6°
C24C11C9H1885.2°132.4°
O7C11C9O12147.5°105.0°
O7C11C24C13147.4°98.2°
O7C11C24F2530.8°19.9°
O7C11C24H794.2°142.9°
O7C11C9H1830.1°14.3°
C9O12C13C242.0°15.5°
O12C9C10H1172.5°117.1°
O12C9C10H452.9°2.5°
C9O12C13H3119.9°104.1°
O12C9C11H1787.6°131.2°
O12C13C24H3118.9°119.4°
O12C13C24F2594.7°140.6°
O12C13C24H7140.8°95.7°
C13O12C9H1897.3°118.9°
C13C24F25H7123.4°123.6°
C13C24C11H1786.9°140.2°
F25C24C13H324.1°21.2°
F25C24C11H17156.5°101.8°
H1C10C9H1852.6°123.6°
H4C10C9H1867.0°116.8°
H3C13C24H7100.3°144.8°
H5C1C3H11105.2°167.5°
H5C1C40H1648.7°36.6°
H7C24C11H1731.6°21.2°
H6C28C29H10170.6°132.2°
H6C28C3H11137.9°156.5°
H9C28C29H1048.6°9.6°
H9C28C3H1115.9°33.2°
H10C29C40H16173.4°106.3°
H11C3C7H1496.4°172.9°
H11C3C7H1522.1°66.1°
H13C36N37H210.2°0.1°
H17C11C9H18155.1°109.5°

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon