WY3
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.46Å | 1.44Å | |
C1 | C3 | sing | 1.51Å | 1.44Å | |
C1 | C4 | doub | 1.36Å | 1.42Å | |
C2 | C5 | doub | 1.41Å | 1.40Å | Aromatic |
C2 | C6 | sing | 1.40Å | 1.41Å | Aromatic |
C3 | N7 | sing | 1.47Å | 1.47Å | |
C4 | C8 | sing | 1.41Å | 1.41Å | |
C5 | O9 | sing | 1.35Å | 1.35Å | |
C5 | C10 | sing | 1.39Å | 1.41Å | Aromatic |
C6 | C11 | doub | 1.36Å | 1.40Å | Aromatic |
N7 | C12 | sing | 1.47Å | 1.44Å | |
N7 | C13 | sing | 1.47Å | 1.47Å | |
C8 | O9 | sing | 1.34Å | 1.37Å | |
C8 | O14 | doub | 1.22Å | 1.23Å | |
C10 | C15 | doub | 1.38Å | 1.37Å | Aromatic |
C11 | C15 | sing | 1.39Å | 1.40Å | Aromatic |
C12 | C16 | sing | 1.53Å | 1.56Å | |
C13 | C17 | sing | 1.53Å | 1.47Å | |
C15 | O18 | sing | 1.36Å | 1.33Å | |
C16 | O19 | sing | 1.43Å | 1.40Å | |
C17 | O19 | sing | 1.43Å | 1.47Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C3 | H3A | sing | 1.09Å | 1.10Å | |
C4 | H4 | sing | 1.08Å | 1.08Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C10 | H10 | sing | 1.08Å | 1.08Å | |
C11 | H11 | sing | 1.08Å | 1.08Å | |
C12 | H12 | sing | 1.09Å | 1.10Å | |
C12 | H12A | sing | 1.09Å | 1.10Å | |
C13 | H13 | sing | 1.09Å | 1.10Å | |
C13 | H13A | sing | 1.09Å | 1.10Å | |
C16 | H16 | sing | 1.09Å | 1.10Å | |
C16 | H16A | sing | 1.09Å | 1.10Å | |
C17 | H17 | sing | 1.09Å | 1.10Å | |
C17 | H17A | sing | 1.09Å | 1.10Å | |
O18 | HO18 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | C3 | 118.2° | 120.8° |
C2 | C1 | C4 | 116.2° | 118.2° |
C1 | C2 | C5 | 121.8° | 118.9° |
C1 | C2 | C6 | 122.1° | 121.0° |
C3 | C1 | C4 | 125.2° | 120.9° |
C1 | C3 | N7 | 115.9° | 109.5° |
C1 | C3 | H3 | 107.8° | 109.5° |
C1 | C3 | H3A | 107.8° | 109.5° |
C1 | C4 | C8 | 119.8° | 119.8° |
C1 | C4 | H4 | 120.1° | 120.1° |
C5 | C2 | C6 | 116.1° | 120.1° |
C2 | C5 | O9 | 119.7° | 119.9° |
C2 | C5 | C10 | 123.1° | 119.4° |
C2 | C6 | C11 | 121.9° | 119.8° |
C2 | C6 | H6 | 119.0° | 120.1° |
C3 | N7 | C12 | 110.5° | 111.0° |
C3 | N7 | C13 | 106.1° | 111.0° |
N7 | C3 | H3 | 107.8° | 109.4° |
N7 | C3 | H3A | 107.8° | 109.4° |
C4 | C8 | O9 | 121.1° | 121.7° |
C4 | C8 | O14 | 120.9° | 119.1° |
C8 | C4 | H4 | 120.1° | 120.1° |
O9 | C5 | C10 | 117.2° | 120.7° |
C5 | O9 | C8 | 121.2° | 121.4° |
C5 | C10 | C15 | 118.4° | 119.8° |
C5 | C10 | H10 | 120.8° | 120.1° |
C6 | C11 | C15 | 119.1° | 120.4° |
C11 | C6 | H6 | 119.1° | 120.1° |
C6 | C11 | H11 | 120.4° | 119.8° |
C12 | N7 | C13 | 110.7° | 110.8° |
N7 | C12 | C16 | 111.7° | 109.3° |
N7 | C12 | H12 | 108.9° | 109.5° |
N7 | C12 | H12A | 108.9° | 109.6° |
N7 | C13 | C17 | 103.9° | 109.3° |
N7 | C13 | H13 | 110.9° | 109.5° |
N7 | C13 | H13A | 110.9° | 109.5° |
O9 | C8 | O14 | 117.9° | 119.2° |
C10 | C15 | C11 | 121.3° | 120.6° |
C10 | C15 | O18 | 119.0° | 119.7° |
C15 | C10 | H10 | 120.8° | 120.1° |
C11 | C15 | O18 | 119.6° | 119.7° |
C15 | C11 | H11 | 120.4° | 119.8° |
C12 | C16 | O19 | 107.9° | 109.3° |
C16 | C12 | H12 | 108.9° | 109.5° |
C16 | C12 | H12A | 108.9° | 109.5° |
C12 | C16 | H16 | 109.9° | 109.5° |
C12 | C16 | H16A | 109.9° | 109.5° |
C13 | C17 | O19 | 106.5° | 109.3° |
C17 | C13 | H13 | 110.8° | 109.5° |
C17 | C13 | H13A | 110.9° | 109.5° |
C13 | C17 | H17 | 110.2° | 109.5° |
C13 | C17 | H17A | 110.2° | 109.5° |
C15 | O18 | HO18 | 109.5° | 114.0° |
C16 | O19 | C17 | 112.5° | 113.8° |
O19 | C16 | H16 | 109.9° | 109.6° |
O19 | C16 | H16A | 109.8° | 109.5° |
O19 | C17 | H17 | 110.2° | 109.5° |
O19 | C17 | H17A | 110.2° | 109.5° |
H3 | C3 | H3A | 109.5° | 109.4° |
H12 | C12 | H12A | 109.5° | 109.5° |
H13 | C13 | H13A | 109.4° | 109.5° |
H16 | C16 | H16A | 109.5° | 109.6° |
H17 | C17 | H17A | 109.5° | 109.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | C3 | C4 | 172.5° | 179.7° |
C1 | C2 | C5 | C6 | 178.8° | 180.0° |
C2 | C1 | C3 | N7 | 169.0° | 85.0° |
C2 | C1 | C4 | C8 | 5.1° | 0.0° |
C1 | C2 | C5 | O9 | 0.2° | 0.1° |
C1 | C2 | C5 | C10 | 179.8° | 180.0° |
C1 | C2 | C6 | C11 | 179.1° | 180.0° |
C2 | C1 | C3 | H3 | 70.1° | 35.0° |
C2 | C1 | C3 | H3A | 48.1° | 155.0° |
C2 | C1 | C4 | H4 | 174.9° | 180.0° |
C1 | C2 | C6 | H6 | 0.8° | 0.0° |
C3 | C1 | C2 | C5 | 175.7° | 180.0° |
C3 | C1 | C2 | C6 | 5.5° | 0.0° |
C1 | C3 | N7 | H3 | 120.9° | 120.1° |
C1 | C3 | N7 | H3A | 120.9° | 120.0° |
C3 | C1 | C4 | C8 | 177.7° | 179.8° |
C1 | C3 | N7 | C12 | 83.7° | 169.9° |
C1 | C3 | N7 | C13 | 156.2° | 66.4° |
C1 | C3 | H3 | H3A | 117.0° | 120.0° |
C3 | C1 | C4 | H4 | 2.3° | 0.3° |
C4 | C1 | C2 | C5 | 2.5° | 0.3° |
C4 | C1 | C2 | C6 | 178.7° | 179.7° |
C4 | C1 | C3 | N7 | 3.5° | 95.3° |
C1 | C4 | C8 | H4 | 180.0° | 179.9° |
C1 | C4 | C8 | O9 | 5.2° | 0.5° |
C1 | C4 | C8 | O14 | 176.6° | 180.0° |
C4 | C1 | C3 | H3 | 117.5° | 144.7° |
C4 | C1 | C3 | H3A | 124.4° | 24.7° |
C2 | C5 | O9 | C10 | 179.6° | 179.9° |
C5 | C2 | C6 | C11 | 2.0° | 0.0° |
C2 | C5 | O9 | C8 | 0.4° | 0.4° |
C2 | C5 | C10 | C15 | 0.8° | 0.0° |
C5 | C2 | C6 | H6 | 178.0° | 180.0° |
C2 | C5 | C10 | H10 | 179.2° | 180.0° |
C6 | C2 | C5 | O9 | 178.6° | 179.9° |
C6 | C2 | C5 | C10 | 0.9° | 0.0° |
C2 | C6 | C11 | H6 | 180.0° | 179.9° |
C2 | C6 | C11 | C15 | 1.4° | 0.0° |
C2 | C6 | C11 | H11 | 178.6° | 180.0° |
C3 | N7 | C12 | C13 | 117.2° | 123.8° |
C3 | N7 | C12 | C16 | 173.1° | 177.6° |
C3 | N7 | C13 | C17 | 174.6° | 177.6° |
N7 | C3 | H3 | H3A | 117.1° | 119.9° |
C3 | N7 | C12 | H12 | 52.7° | 62.5° |
C3 | N7 | C12 | H12A | 66.6° | 57.6° |
C3 | N7 | C13 | H13 | 55.5° | 57.6° |
C3 | N7 | C13 | H13A | 66.3° | 62.5° |
C4 | C8 | O9 | C5 | 2.3° | 0.7° |
C4 | C8 | O9 | O14 | 178.3° | 179.5° |
C5 | O9 | C8 | O14 | 179.5° | 179.8° |
O9 | C5 | C10 | C15 | 179.7° | 180.0° |
O9 | C5 | C10 | H10 | 0.3° | 0.0° |
C10 | C5 | O9 | C8 | 180.0° | 179.5° |
C5 | C10 | C15 | H10 | 180.0° | 180.0° |
C5 | C10 | C15 | C11 | 1.5° | 0.0° |
C5 | C10 | C15 | O18 | 177.7° | 180.0° |
C6 | C11 | C15 | C10 | 0.4° | 0.0° |
C6 | C11 | C15 | H11 | 180.0° | 180.0° |
C6 | C11 | C15 | O18 | 178.7° | 180.0° |
N7 | C12 | C16 | H12 | 120.3° | 119.9° |
N7 | C12 | C16 | H12A | 120.3° | 120.0° |
C12 | N7 | C13 | C17 | 65.5° | 58.6° |
N7 | C12 | C16 | O19 | 49.0° | 56.8° |
C12 | N7 | C3 | H3 | 155.4° | 70.0° |
C12 | N7 | C3 | H3A | 37.2° | 49.9° |
N7 | C12 | H12 | H12A | 119.0° | 120.2° |
C12 | N7 | C13 | H13 | 175.3° | 178.6° |
C12 | N7 | C13 | H13A | 53.6° | 61.3° |
N7 | C12 | C16 | H16 | 168.7° | 176.8° |
N7 | C12 | C16 | H16A | 70.8° | 63.1° |
C13 | N7 | C12 | C16 | 55.9° | 58.6° |
N7 | C13 | C17 | H13 | 119.1° | 119.9° |
N7 | C13 | C17 | H13A | 119.1° | 119.9° |
N7 | C13 | C17 | O19 | 69.0° | 56.9° |
C13 | N7 | C3 | H3 | 35.3° | 53.7° |
C13 | N7 | C3 | H3A | 82.9° | 173.6° |
C13 | N7 | C12 | H12 | 64.5° | 61.3° |
C13 | N7 | C12 | H12A | 176.2° | 178.6° |
N7 | C13 | H13 | H13A | 122.6° | 120.1° |
N7 | C13 | C17 | H17 | 50.5° | 63.1° |
N7 | C13 | C17 | H17A | 171.5° | 176.8° |
O9 | C8 | C4 | H4 | 174.8° | 179.5° |
O14 | C8 | C4 | H4 | 3.4° | 0.0° |
C10 | C15 | C11 | O18 | 179.1° | 180.0° |
C10 | C15 | C11 | H11 | 179.6° | 179.9° |
C10 | C15 | O18 | HO18 | 180.0° | 89.9° |
C15 | C11 | C6 | H6 | 178.6° | 180.0° |
C11 | C15 | C10 | H10 | 178.5° | 180.0° |
C11 | C15 | O18 | HO18 | 0.8° | 90.0° |
C12 | C16 | O19 | H16 | 119.8° | 120.0° |
C12 | C16 | O19 | H16A | 119.8° | 119.9° |
C12 | C16 | O19 | C17 | 55.3° | 58.6° |
C16 | C12 | H12 | H12A | 119.0° | 120.1° |
C12 | C16 | H16 | H16A | 120.7° | 120.1° |
C13 | C17 | O19 | C16 | 68.9° | 58.7° |
C13 | C17 | O19 | H17 | 119.5° | 119.9° |
C13 | C17 | O19 | H17A | 119.5° | 119.9° |
C17 | C13 | H13 | H13A | 122.6° | 120.1° |
C13 | C17 | H17 | H17A | 121.4° | 120.1° |
O18 | C15 | C10 | H10 | 2.3° | 0.0° |
O18 | C15 | C11 | H11 | 1.3° | 0.0° |
O19 | C16 | C12 | H12 | 71.4° | 63.2° |
O19 | C16 | C12 | H12A | 169.3° | 176.8° |
O19 | C16 | H16 | H16A | 120.7° | 120.1° |
C16 | O19 | C17 | H17 | 50.7° | 61.3° |
C16 | O19 | C17 | H17A | 171.6° | 178.6° |
O19 | C17 | C13 | H13 | 171.9° | 176.8° |
O19 | C17 | C13 | H13A | 50.2° | 63.1° |
C17 | O19 | C16 | H16 | 175.1° | 178.6° |
C17 | O19 | C16 | H16A | 64.4° | 61.2° |
O19 | C17 | H17 | H17A | 121.4° | 120.1° |
H6 | C6 | C11 | H11 | 1.4° | 0.1° |
H12 | C12 | C16 | H16 | 48.4° | 56.8° |
H12 | C12 | C16 | H16A | 168.9° | 177.0° |
H12A | C12 | C16 | H16 | 70.9° | 63.2° |
H12A | C12 | C16 | H16A | 49.6° | 56.9° |
H13 | C13 | C17 | H17 | 68.6° | 56.9° |
H13 | C13 | C17 | H17A | 52.4° | 63.3° |
H13A | C13 | C17 | H17 | 169.7° | 177.0° |
H13A | C13 | C17 | H17A | 69.4° | 56.8° |