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SummaryGeometryPCM/PTMRelated PDB entries

WXP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CBDCBCdoub1.37Å1.38ÅAromatic
CBDCBEsing1.39Å1.40ÅAromatic
CBMCBNdoub1.37Å1.38ÅAromatic
CBMCBLsing1.38Å1.39ÅAromatic
CBCCBBsing1.37Å1.38ÅAromatic
CBECAZdoub1.39Å1.39ÅAromatic
CBNCBOsing1.37Å1.38ÅAromatic
CBLCBKdoub1.39Å1.40ÅAromatic
CAPCAQdoub1.33Å1.32Å
CAPCAOsing1.39Å1.33Å
CAQCARsing1.39Å1.36Å
CBBCBAdoub1.39Å1.39ÅAromatic
CAZCBAsing1.39Å1.40ÅAromatic
CAZCABsing1.51Å1.42Å
CBOCBPdoub1.39Å1.39ÅAromatic
CBKCBPsing1.39Å1.39ÅAromatic
CBKCACsing1.51Å1.42Å
CAOCABdoub1.44Å1.39Å
CAONASsing1.39Å1.36Å
CARCACsing1.44Å1.42Å
CARNASdoub1.38Å1.35Å
CABCAMsing1.43Å1.37Å
CACCATdoub1.44Å1.41Å
NASFEsing2.08Å2.15Å
CAMCALdoub1.40Å1.34ÅAromatic
CAMNANsing1.37Å1.33ÅAromatic
CATCAUsing1.39Å1.35Å
CATNAXsing1.38Å1.35Å
CALCAKsing1.34Å1.33ÅAromatic
NANFEsing2.10Å2.22Å
NANCAJsing1.36Å1.32ÅAromatic
CAUCAVdoub1.33Å1.32Å
FENAXsing2.07Å2.15Å
FENAIsing2.12Å2.15Å
NAXCAWsing1.38Å1.35Å
CAKCAJdoub1.36Å1.33ÅAromatic
CAJCAAsing1.43Å1.36Å
CAVCAWsing1.38Å1.33Å
CAWCADdoub1.43Å1.39Å
NAICAHsing1.36Å1.33Å
NAICAEdoub1.37Å1.34Å
CAACAHdoub1.43Å1.36Å
CBJCBIdoub1.38Å1.40ÅAromatic
CBJCAYsing1.40Å1.40ÅAromatic
CADCAEsing1.43Å1.38Å
CADCAYsing1.51Å1.42Å
CAHCAGsing1.36Å1.33Å
CAECAFsing1.40Å1.35Å
CBICBHsing1.37Å1.39ÅAromatic
CAYCBFdoub1.39Å1.41ÅAromatic
CAGCAFdoub1.34Å1.33Å
CBHCBGdoub1.37Å1.39ÅAromatic
CBFCBGsing1.38Å1.40ÅAromatic
CBLH1sing0.94Å1.08Å
CBMH2sing0.94Å1.08Å
CBNH3sing0.94Å1.08Å
CBOH4sing0.94Å1.08Å
CBPH5sing0.94Å1.08Å
CAUH6sing0.94Å1.08Å
CAVH7sing0.94Å1.08Å
CAQH8sing0.94Å1.08Å
CAPH9sing0.94Å1.08Å
CBAH10sing0.94Å1.08Å
CBBH11sing0.94Å1.08Å
CBCH12sing0.94Å1.08Å
CBDH13sing0.94Å1.08Å
CBEH14sing0.94Å1.08Å
CAAH17sing0.95Å1.08Å
CAGH18sing0.94Å1.08Å
CAFH19sing0.94Å1.08Å
CBFH20sing0.94Å1.08Å
CBGH21sing0.94Å1.08Å
CBHH22sing0.94Å1.08Å
CBIH23sing0.94Å1.08Å
CBJH24sing0.94Å1.08Å
CALH15sing0.94Å1.08Å
CAKH16sing0.94Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CBCCBDCBE122.1°120.2°
CBDCBCCBB118.1°119.8°
CBDCBCH12121.0°120.2°
CBCCBDH13119.0°119.9°
CBDCBECAZ120.4°121.0°
CBECBDH13118.9°119.8°
CBDCBEH14119.8°119.4°
CBNCBMCBL120.4°120.3°
CBMCBNCBO118.8°119.7°
CBNCBMH2119.8°119.9°
CBMCBNH3120.6°120.1°
CBMCBLCBK122.1°121.0°
CBMCBLH1119.0°119.4°
CBLCBMH2119.8°119.8°
CBCCBBCBA119.7°120.2°
CBCCBBH11120.2°120.0°
CBBCBCH12120.9°120.1°
CBECAZCBA116.5°117.4°
CBECAZCAB123.3°121.0°
CAZCBEH14119.8°119.4°
CBNCBOCBP120.9°120.2°
CBOCBNH3120.6°120.1°
CBNCBOH4119.6°120.0°
CBLCBKCBP116.2°117.3°
CBLCBKCAC120.4°121.4°
CBKCBLH1119.0°119.4°
CAQCAPCAO110.0°108.6°
CAPCAQCAR112.7°108.8°
CAPCAQH8123.6°125.4°
CAQCAPH9125.0°125.5°
CAPCAOCAB127.9°127.5°
CAPCAONAS102.3°107.6°
CAOCAPH9125.0°125.9°
CAQCARCAC131.0°126.7°
CAQCARNAS99.7°107.8°
CARCAQH8123.7°125.7°
CBBCBACAZ123.2°121.0°
CBBCBAH10118.4°119.4°
CBACBBH11120.1°119.8°
CBACAZCAB120.3°120.9°
CAZCBAH10118.4°119.5°
CAZCABCAO117.2°118.3°
CAZCABCAM114.1°116.7°
CBOCBPCBK121.7°121.0°
CBPCBOH4119.6°119.8°
CBOCBPH5119.1°119.4°
CBPCBKCAC123.3°120.6°
CBKCBPH5119.2°119.4°
CBKCACCAR114.6°117.6°
CBKCACCAT119.6°116.9°
CABCAONAS129.8°124.8°
CAOCABCAM128.7°124.5°
CAONASCAR115.3°107.2°
CAONASFE122.2°125.9°
CACCARNAS129.3°125.6°
CARCACCAT125.8°125.4°
CARNASFE122.4°123.5°
CABCAMCAL131.0°129.2°
CABCAMNAN125.6°123.3°
CACCATCAU131.7°128.2°
CACCATNAX127.8°124.2°
NASFENAN88.6°88.0°
NASFENAX90.7°91.7°
NASFENAI178.0°170.7°
CALCAMNAN103.4°107.6°
CAMCALCAK109.6°108.2°
CAMCALH15125.2°126.1°
CAMNANFE124.9°128.2°
CAMNANCAJ113.3°106.4°
CAUCATNAX100.5°107.5°
CATCAUCAV112.1°108.5°
CATCAUH6124.0°126.2°
CATNAXFE123.5°125.1°
CATNAXCAW115.2°107.0°
CALCAKCAJ109.2°107.7°
CAKCALH15125.2°125.6°
CALCAKH16125.4°125.5°
FENANCAJ121.7°123.9°
NANFENAX179.0°177.0°
NANFENAI89.6°91.8°
NANCAJCAK104.6°110.1°
NANCAJCAA126.0°125.7°
CAUCAVCAW109.9°108.6°
CAVCAUH6124.0°125.3°
CAUCAVH7125.0°126.0°
NAXFENAI91.1°88.0°
FENAXCAW120.9°125.6°
FENAICAH122.9°123.6°
FENAICAE123.6°128.8°
NAXCAWCAV102.3°108.0°
NAXCAWCAD128.1°127.5°
CAKCAJCAA129.5°124.2°
CAJCAKH16125.4°126.8°
CAJCAACAH133.0°127.8°
CAJCAAH17113.5°116.1°
CAVCAWCAD129.6°123.9°
CAWCAVH7125.0°125.3°
CAWCADCAE129.4°124.1°
CAWCADCAY116.8°116.6°
CAHNAICAE113.4°106.5°
NAICAHCAA126.6°125.6°
NAICAHCAG104.7°110.0°
NAICAECAD126.0°122.4°
NAICAECAF102.5°107.4°
CAACAHCAG128.6°124.3°
CAHCAAH17113.5°116.0°
CBICBJCAY121.1°121.0°
CBJCBICBH120.5°120.3°
CBJCBIH23119.8°119.8°
CBICBJH24119.5°119.2°
CBJCAYCAD121.5°121.2°
CBJCAYCBF117.6°117.2°
CAYCBJH24119.4°119.6°
CAECADCAY113.8°118.5°
CADCAECAF131.5°130.2°
CADCAYCBF120.9°120.9°
CAHCAGCAF108.8°107.7°
CAHCAGH18125.6°126.8°
CAECAFCAG110.5°108.3°
CAECAFH19124.7°126.1°
CBICBHCBG119.5°119.7°
CBICBHH22120.3°120.2°
CBHCBIH23119.8°119.9°
CAYCBFCBG121.5°121.1°
CAYCBFH20119.3°119.4°
CAFCAGH18125.6°125.5°
CAGCAFH19124.8°125.6°
CBHCBGCBF119.8°120.3°
CBHCBGH21120.1°120.0°
CBGCBHH22120.2°120.1°
CBGCBFH20119.3°119.4°
CBFCBGH21120.1°119.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CBCCBDCBEH13180.0°179.1°
CBDCBCCBBH12180.0°179.9°
CBCCBDCBECAZ1.4°4.0°
CBDCBCCBBCBA0.7°0.8°
CBDCBCCBBH11179.3°180.0°
CBCCBDCBEH14178.7°178.9°
CBECBDCBCCBB0.1°0.8°
CBDCBECAZH14180.0°174.9°
CBDCBECAZCBA1.8°6.9°
CBDCBECAZCAB179.3°178.0°
CBECBDCBCH12179.9°179.1°
CBNCBMCBLH2180.0°179.2°
CBMCBNCBOH3180.0°180.0°
CBNCBMCBLCBK1.0°4.0°
CBMCBNCBOCBP0.0°0.8°
CBNCBMCBLH1179.0°178.8°
CBMCBNCBOH4180.0°179.9°
CBLCBMCBNCBO0.7°0.8°
CBMCBLCBKH1180.0°174.8°
CBMCBLCBKCBP0.6°6.9°
CBMCBLCBKCAC178.7°177.9°
CBLCBMCBNH3179.3°179.2°
CBCCBBCBAH11180.0°179.3°
CBCCBBCBACAZ0.2°3.9°
CBCCBBCBAH10179.8°178.9°
CBBCBCCBDH13180.0°180.0°
CBECAZCBACBB1.1°6.8°
CBECAZCBACAB179.0°171.1°
CBECAZCABCAO72.1°132.6°
CBECAZCABCAM107.8°54.7°
CBECAZCBAH10178.9°178.1°
CAZCBECBDH13178.7°176.9°
CBNCBOCBPH4180.0°179.1°
CBNCBOCBPCBK0.3°4.0°
CBOCBNCBMH2179.4°180.0°
CBNCBOCBPH5179.7°178.9°
CBLCBKCBPCBO0.0°6.9°
CBLCBKCBPCAC179.3°171.1°
CBLCBKCACCAR52.9°48.5°
CBLCBKCACCAT126.6°128.1°
CBKCBLCBMH2179.0°176.8°
CBLCBKCBPH5180.0°178.2°
CAQCAPCAOH9180.0°179.7°
CAPCAQCARH8180.0°178.5°
CAQCAPCAOCAB179.8°179.8°
CAQCAPCAONAS0.1°1.5°
CAPCAQCARCAC180.0°179.7°
CAPCAQCARNAS0.5°0.0°
CAOCAPCAQCAR0.5°0.9°
CAPCAOCABCAZ0.0°7.8°
CAPCAOCABNAS179.9°178.0°
CAPCAONASCAR0.2°1.5°
CAPCAOCABCAM180.0°179.9°
CAPCAONASFE175.8°158.2°
CAOCAPCAQH8179.5°179.4°
CAQCARCACCBK0.2°19.7°
CAQCARNASCAO0.5°1.0°
CAQCARCACNAS179.3°179.6°
CAQCARCACCAT179.7°164.1°
CAQCARNASFE175.6°159.4°
CARCAQCAPH9179.6°179.3°
CBBCBACAZH10180.0°175.0°
CBBCBACAZCAB180.0°177.9°
CBACBBCBCH12179.3°179.2°
CBACAZCABCAO109.0°56.6°
CBACAZCABCAM71.1°116.0°
CAZCBACBBH11179.8°176.8°
CBACAZCBEH14178.2°178.2°
CAZCABCAOCAM179.9°172.1°
CAZCABCAONAS179.9°174.2°
CAZCABCAMCAL4.5°11.9°
CAZCABCAMNAN174.5°167.3°
CABCAZCBAH100.0°7.0°
CABCAZCBEH140.7°7.1°
CBOCBPCBKH5180.0°174.9°
CBOCBPCBKCAC179.3°178.0°
CBPCBOCBNH3180.0°179.2°
CBPCBKCACCAR126.4°122.2°
CBPCBKCACCAT54.1°61.2°
CBPCBKCBLH1179.4°178.3°
CBKCBPCBOH4179.7°176.9°
CBKCACCARCAT179.5°176.2°
CBKCACCARNAS179.1°160.0°
CBKCACCATCAU6.1°3.8°
CBKCACCATNAX171.9°177.9°
CACCBKCBLH11.3°7.3°
CACCBKCBPH50.7°7.1°
CABCAONASCAR179.9°179.9°
CABCAONASFE4.1°20.1°
CAOCABCAMCAL175.5°160.3°
CAOCABCAMNAN5.4°20.5°
CABCAOCAPH90.2°0.4°
CAONASCARCAC179.9°178.7°
CAONASCARFE176.1°160.4°
NASCAOCABCAM0.1°2.1°
CAONASFENAN2.8°19.2°
CAONASFENAX177.8°163.8°
CAONASFENAI16.8°108.5°
NASCAOCAPH9179.9°178.7°
CACCARNASFE3.9°20.9°
CARCACCATCAU174.4°172.5°
CARCACCATNAX7.5°5.8°
CACCARCAQH80.0°1.9°
NASCARCACCAT0.3°16.3°
CARNASFENAN178.6°175.8°
CARNASFENAX2.0°7.2°
CARNASFENAI159.0°94.9°
NASCARCAQH8179.5°178.4°
CABCAMCALNAN179.2°179.3°
CABCAMCALCAK179.4°179.3°
CABCAMNANFE5.3°14.9°
CABCAMNANCAJ179.2°178.8°
CABCAMCALH150.6°1.7°
CACCATCAUNAX178.4°178.5°
CACCATCAUCAV179.3°179.8°
CACCATNAXFE8.5°19.2°
CACCATNAXCAW178.4°177.1°
CACCATCAUH60.7°0.0°
NASFENANCAM1.4°2.6°
NASFENAXCAT3.5°11.6°
NASFENANNAX43.3°84.1°
NASFENANNAI179.3°170.7°
NASFENANCAJ176.5°161.6°
NASFENAXNAI179.4°170.7°
NASFENAXCAW176.2°172.4°
NASFENAICAH19.6°90.5°
NASFENAICAE158.4°102.6°
CAMCALCAKH15180.0°179.0°
CALCAMNANFE175.4°165.8°
CALCAMNANCAJ0.1°0.6°
CAMCALCAKCAJ0.4°0.6°
CAMCALCAKH16179.6°179.7°
NANCAMCALCAK0.2°0.0°
CAMNANFECAJ175.1°164.2°
CAMNANFENAX42.0°86.7°
CAMNANFENAI179.3°173.3°
CAMNANCAJCAK0.3°1.0°
CAMNANCAJCAA178.9°179.8°
NANCAMCALH15179.8°179.0°
CATCAUCAVH6180.0°179.9°
CAUCATNAXFE172.9°159.4°
CAUCATNAXCAW0.1°4.2°
CATCAUCAVCAW1.5°2.2°
CATCAUCAVH7178.5°179.1°
CATNAXFENAN39.8°72.3°
NAXCATCAUCAV0.8°1.3°
CATNAXFECAW172.7°160.7°
CATNAXFENAI177.1°159.0°
CATNAXCAWCAV0.9°5.6°
CATNAXCAWCAD175.4°177.4°
NAXCATCAUH6179.1°178.6°
CALCAKCAJNAN0.4°1.0°
CALCAKCAJH16180.0°179.7°
CALCAKCAJCAA178.7°179.8°
NANFENAXNAI137.3°86.7°
NANFENAXCAW132.9°88.4°
FENANCAJCAK175.4°166.2°
FENANCAJCAA5.5°13.0°
NANFENAICAH0.0°1.6°
NANFENAICAE178.0°168.4°
CAJNANFENAX133.2°77.5°
CAJNANFENAI4.2°9.1°
NANCAJCAKCAA179.1°179.2°
NANCAJCAACAH1.4°4.1°
NANCAJCAAH17178.6°175.8°
NANCAJCAKH16179.6°179.3°
CAUCAVCAWNAX1.4°4.9°
CAUCAVCAWH7180.0°176.9°
CAUCAVCAWCAD174.8°177.0°
FENAXCAWCAV172.3°158.0°
FENAXCAWCAD11.4°13.8°
NAXFENAICAH179.3°178.6°
NAXFENAICAE2.7°14.6°
NAIFENAXCAW4.5°1.7°
FENAICAHCAE178.2°169.3°
FENAICAHCAA3.6°9.8°
FENAICAECAD4.4°13.1°
FENAICAHCAG176.1°167.7°
FENAICAECAF175.8°167.4°
NAXCAWCAVCAD176.2°172.2°
NAXCAWCADCAE11.2°20.3°
NAXCAWCADCAY170.3°149.4°
NAXCAWCAVH7178.6°178.2°
CAKCAJCAACAH179.7°175.0°
CAKCAJCAAH170.3°5.1°
CAJCAKCALH15179.6°179.6°
CAJCAACAHNAI4.0°8.8°
CAJCAACAHH17180.0°179.9°
CAJCAACAHCAG175.6°168.3°
CAACAJCAKH161.3°0.1°
CAVCAWCADCAE173.6°150.3°
CAVCAWCADCAY4.9°40.0°
CAWCAVCAUH6178.5°177.9°
CAWCADCAENAI1.7°5.6°
CAWCADCAYCBJ67.1°43.6°
CAWCADCAECAY178.5°169.5°
CAWCADCAECAF177.9°173.8°
CAWCADCAYCBF114.5°126.5°
CADCAWCAVH75.2°6.1°
NAICAHCAACAG179.7°177.1°
CAHNAICAECAD177.4°178.4°
CAHNAICAECAF2.3°1.2°
NAICAHCAGCAF0.8°1.5°
NAICAHCAAH17176.0°171.3°
NAICAHCAGH18179.1°179.1°
CAENAICAHCAA178.2°179.1°
NAICAECADCAF179.6°179.4°
NAICAECADCAY179.7°163.9°
CAENAICAHCAG2.1°1.7°
NAICAECAFCAG1.7°0.3°
NAICAECAFH19178.3°179.6°
CAACAHCAGCAF179.4°179.0°
CAACAHCAGH180.6°1.6°
CBICBJCAYH24180.0°174.0°
CBICBJCAYCAD179.7°177.9°
CBJCBICBHH23180.0°179.1°
CBICBJCAYCBF1.2°7.4°
CBJCBICBHCBG0.6°1.0°
CBJCBICBHH22179.4°179.0°
CBJCAYCADCAE114.2°126.7°
CBJCAYCADCBF178.4°170.1°
CAYCBJCBICBH1.3°4.5°
CBJCAYCBFCBG0.6°7.2°
CBJCAYCBFH20179.4°177.7°
CAYCBJCBIH23178.7°176.5°
CAECADCAYCBF64.2°63.2°
CADCAECAFCAG178.0°179.2°
CADCAECAFH192.0°0.9°
CAYCADCAECAF0.6°16.7°
CADCAYCBFCBG179.1°177.7°
CADCAYCBFH201.0°7.2°
CADCAYCBJH240.3°8.0°
CAHCAGCAFCAE0.6°0.7°
CAHCAGCAFH18180.0°179.4°
CAGCAHCAAH174.4°11.6°
CAHCAGCAFH19179.4°179.4°
CAECAFCAGH19180.0°179.9°
CAECAFCAGH18179.4°179.8°
CBICBHCBGH22180.0°180.0°
CBICBHCBGCBF0.0°0.7°
CBICBHCBGH21179.9°179.9°
CBHCBICBJH24178.7°178.5°
CAYCBFCBGCBH0.1°4.0°
CAYCBFCBGH20180.0°175.1°
CAYCBFCBGH21179.9°176.7°
CBFCAYCBJH24178.8°178.5°
CBHCBGCBFH21180.0°179.3°
CBHCBGCBFH20179.9°179.1°
CBGCBHCBIH23179.4°180.0°
CBFCBGCBHH22180.0°179.3°
H1CBLCBMH21.0°2.0°
H2CBMCBNH30.6°0.0°
H3CBNCBOH40.0°0.1°
H4CBOCBPH50.3°2.0°
H6CAUCAVH71.5°1.1°
H8CAQCAPH90.4°0.9°
H10CBACBBH110.2°1.8°
H11CBBCBCH120.7°0.1°
H12CBCCBDH130.0°0.0°
H13CBDCBEH141.3°2.0°
H18CAGCAFH190.6°0.1°
H20CBFCBGH210.1°1.6°
H21CBGCBHH220.0°0.1°
H22CBHCBIH230.7°0.0°
H23CBICBJH241.3°2.4°
H15CALCAKH160.4°0.7°

259015

PDB entries from 2026-09-02

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