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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NE1CD1sing1.37Å1.38ÅAromatic
NE1CE2sing1.38Å1.38ÅAromatic
CZ2CE2doub1.39Å1.39ÅAromatic
CZ2CH2sing1.38Å1.40ÅAromatic
CD1CGdoub1.34Å1.35ÅAromatic
CE2CD2sing1.41Å1.41ÅAromatic
OCdoub1.21Å1.23Å
CH2CZ3doub1.39Å1.40ÅAromatic
CCAsing1.51Å1.52Å
CGCD2sing1.46Å1.46ÅAromatic
CGCBsing1.51Å1.49Å
CD2CE3doub1.40Å1.41ÅAromatic
CZ3CE3sing1.37Å1.40ÅAromatic
CZ3CP1sing1.51Å1.51Å
CANsing1.47Å1.46Å
CACBsing1.53Å1.53Å
CP5CP3sing1.51Å1.51Å
CP1CP2sing1.51Å1.51Å
CP3CP4sing1.51Å1.51Å
CP3CP2doub1.31Å1.40Å
COXTsing1.34Å1.33Å
NHsing1.01Å1.00Å
NH2sing1.01Å1.00Å
CAHAsing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
CD1HD1sing1.08Å1.08Å
CE3HE3sing1.08Å1.08Å
NE1HE1sing0.97Å1.00Å
CZ2HZ2sing1.08Å1.08Å
CH2HH2sing1.08Å1.08Å
CP1HP11sing1.09Å1.10Å
CP1HP12sing1.09Å1.10Å
CP2HP2sing1.08Å1.08Å
CP4HP41sing1.09Å1.10Å
CP4HP42sing1.09Å1.10Å
CP4HP43sing1.09Å1.10Å
CP5HP52sing1.09Å1.10Å
CP5HP53sing1.09Å1.10Å
CP5HP51sing1.09Å1.10Å
OXTHXTsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CD1NE1CE2111.7°109.9°
NE1CD1CG108.8°109.9°
NE1CD1HD1125.6°125.1°
CD1NE1HE1124.2°125.0°
NE1CE2CZ2133.8°133.6°
NE1CE2CD2104.6°107.1°
CE2NE1HE1124.1°125.0°
CE2CZ2CH2119.6°119.8°
CZ2CE2CD2121.6°119.3°
CE2CZ2HZ2120.2°120.1°
CZ2CH2CZ3120.0°120.6°
CH2CZ2HZ2120.2°120.1°
CZ2CH2HH2120.0°119.7°
CD1CGCD2106.4°107.0°
CD1CGCB125.0°126.5°
CGCD1HD1125.6°125.0°
CE2CD2CG108.5°106.0°
CE2CD2CE3118.1°119.9°
OCCA120.8°120.0°
OCOXT123.0°120.0°
CH2CZ3CE3120.4°120.5°
CH2CZ3CP1119.8°119.7°
CZ3CH2HH2120.0°119.7°
CCAN110.7°109.5°
CCACB109.6°109.5°
CACOXT116.2°120.0°
CCAHA108.5°109.5°
CD2CGCB128.6°126.5°
CGCD2CE3133.4°134.0°
CGCBCA109.5°109.5°
CGCBHB3109.5°109.4°
CGCBHB2109.4°109.5°
CD2CE3CZ3120.4°119.7°
CD2CE3HE3119.8°120.1°
CE3CZ3CP1119.8°119.7°
CZ3CE3HE3119.8°120.1°
CZ3CP1CP2109.3°109.5°
CZ3CP1HP11109.5°109.4°
CZ3CP1HP12109.5°109.4°
NCACB110.0°109.5°
CANH109.5°111.0°
CANH2109.5°111.0°
NCAHA109.5°109.5°
CBCAHA108.5°109.5°
CACBHB3109.5°109.5°
CACBHB2109.5°109.5°
CP5CP3CP4109.2°120.0°
CP5CP3CP2125.4°120.0°
CP3CP5HP52109.5°109.5°
CP3CP5HP53109.5°109.5°
CP3CP5HP51109.5°109.5°
CP1CP2CP3124.8°120.0°
CP2CP1HP11109.5°109.5°
CP2CP1HP12109.5°109.5°
CP1CP2HP2117.6°120.0°
CP4CP3CP2125.5°120.0°
CP3CP4HP41109.5°109.4°
CP3CP4HP42109.5°109.5°
CP3CP4HP43109.5°109.5°
CP3CP2HP2117.6°120.0°
COXTHXT109.5°117.0°
HNH2109.5°111.0°
HB3CBHB2109.5°109.4°
HP11CP1HP12109.5°109.4°
HP41CP4HP42109.4°109.4°
HP41CP4HP43109.5°109.5°
HP42CP4HP43109.5°109.5°
HP52CP5HP53109.5°109.4°
HP52CP5HP51109.4°109.5°
HP53CP5HP51109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CD1NE1CE2HE1180.0°179.8°
CD1NE1CE2CZ2179.9°179.9°
NE1CD1CGHD1180.0°180.0°
CD1NE1CE2CD20.0°0.5°
NE1CD1CGCD20.2°0.0°
NE1CD1CGCB179.6°179.7°
NE1CE2CZ2CD2179.9°179.4°
NE1CE2CZ2CH2180.0°179.4°
CE2NE1CD1CG0.2°0.3°
NE1CE2CD2CG0.1°0.5°
NE1CE2CD2CE3179.9°179.6°
CE2NE1CD1HD1179.8°179.7°
NE1CE2CZ2HZ20.0°0.6°
CE2CZ2CH2HZ2180.0°179.9°
CE2CZ2CH2CZ30.1°0.0°
CZ2CE2CD2CG179.9°180.0°
CZ2CE2CD2CE30.0°0.1°
CZ2CE2NE1HE10.0°0.3°
CE2CZ2CH2HH2179.9°179.9°
CH2CZ2CE2CD20.0°0.1°
CZ2CH2CZ3HH2180.0°179.9°
CZ2CH2CZ3CE30.1°0.1°
CZ2CH2CZ3CP1180.0°180.0°
CD1CGCD2CE20.2°0.3°
CD1CGCD2CB179.8°179.7°
CD1CGCD2CE3179.8°179.8°
CD1CGCBCA99.4°94.7°
CD1CGCBHB3140.6°145.3°
CD1CGCBHB220.6°25.3°
CGCD1NE1HE1179.9°179.9°
CE2CD2CGCE3179.9°179.9°
CE2CD2CGCB179.6°180.0°
CE2CD2CE3CZ30.1°0.0°
CE2CD2CE3HE3179.9°180.0°
CD2CE2NE1HE1180.0°179.8°
CD2CE2CZ2HZ2179.9°180.0°
OCCAOXT180.0°180.0°
OCCAN136.7°20.0°
OCCACB15.2°100.0°
OCCAHA103.1°140.0°
OCOXTHXT0.0°0.1°
CH2CZ3CE3CD20.0°0.1°
CH2CZ3CE3CP1180.0°179.9°
CH2CZ3CP1CP276.1°90.1°
CH2CZ3CE3HE3180.0°179.9°
CZ3CH2CZ2HZ2179.9°179.9°
CH2CZ3CP1HP11163.9°29.9°
CH2CZ3CP1HP1243.9°149.9°
CCACBCG69.1°175.0°
CCANCB121.2°120.0°
CCANHA119.6°120.0°
CCACBHA118.4°120.0°
CCANH180.0°64.0°
CCANH260.0°60.0°
CCACBHB3170.9°65.0°
CCACBHB250.9°55.0°
CACOXTHXT180.0°180.0°
CGCD2CE3CZ3179.9°179.9°
CD2CGCBCA80.8°85.0°
CD2CGCBHB339.2°35.0°
CD2CGCBHB2159.2°155.0°
CD2CGCD1HD1179.8°180.0°
CGCD2CE3HE30.1°0.1°
CBCGCD2CE30.3°0.1°
CGCBCAN52.8°65.0°
CGCBCAHB3120.0°120.0°
CGCBCAHB2120.0°120.0°
CGCBCAHA172.5°55.0°
CGCBHB3HB2120.0°120.0°
CBCGCD1HD10.4°0.3°
CD2CE3CZ3HE3180.0°180.0°
CD2CE3CZ3CP1180.0°180.0°
CE3CZ3CP1CP2103.9°90.0°
CE3CZ3CH2HH2179.9°180.0°
CE3CZ3CP1HP1116.1°150.0°
CE3CZ3CP1HP12136.1°30.0°
CZ3CP1CP2HP11120.0°120.0°
CZ3CP1CP2HP12120.0°120.0°
CZ3CP1CP2CP380.8°121.9°
CP1CZ3CE3HE30.0°0.0°
CP1CZ3CH2HH20.1°0.1°
CZ3CP1HP11HP12120.1°119.9°
CZ3CP1CP2HP299.2°58.1°
NCACBHA119.7°120.0°
NCACOXT43.3°160.0°
CANHH2120.0°124.0°
NCACBHB367.2°55.0°
NCACBHB2172.8°175.0°
CBCACOXT164.7°80.0°
CBCANH58.8°176.1°
CBCANH2178.8°60.0°
CACBHB3HB2120.0°120.0°
CP5CP3CP2CP135.8°174.1°
CP5CP3CP4CP2179.9°180.0°
CP5CP3CP2HP2144.2°5.8°
CP5CP3CP4HP41180.0°95.2°
CP5CP3CP4HP4260.0°24.7°
CP5CP3CP4HP4360.0°144.8°
CP3CP5HP52HP53120.0°120.0°
CP3CP5HP52HP51120.0°120.0°
CP3CP5HP53HP51120.0°120.0°
CP1CP2CP3CP4144.3°5.8°
CP1CP2CP3HP2180.0°180.0°
CP2CP1HP11HP12120.1°120.1°
CP4CP3CP2HP235.7°174.2°
CP3CP4HP41HP42120.0°120.0°
CP3CP4HP41HP43120.0°120.0°
CP3CP4HP42HP43120.0°120.0°
CP4CP3CP5HP52180.0°90.0°
CP4CP3CP5HP5360.0°150.0°
CP4CP3CP5HP5160.0°30.0°
CP3CP2CP1HP11159.3°1.9°
CP3CP2CP1HP1239.2°118.1°
CP2CP3CP4HP410.1°84.8°
CP2CP3CP4HP42119.9°155.3°
CP2CP3CP4HP43120.1°35.2°
CP2CP3CP5HP520.1°89.9°
CP2CP3CP5HP53120.1°30.0°
CP2CP3CP5HP51119.9°150.0°
OXTCCAHA76.9°40.0°
HNCAHA60.4°56.1°
H2NCAHA59.6°180.0°
HACACBHB352.5°175.0°
HACACBHB267.5°65.1°
HD1CD1NE1HE10.1°0.0°
HZ2CZ2CH2HH20.1°0.0°
HP11CP1CP2HP220.7°178.1°
HP12CP1CP2HP2140.8°61.9°
HP41CP4HP42HP43120.0°120.0°
HP52CP5HP53HP51120.0°120.0°

226262

PDB entries from 2024-10-16

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