Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

WOY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2Ndoub1.33Å1.34ÅAromatic
C2C1sing1.38Å1.38ÅAromatic
CC1sing1.51Å1.51Å
CC5sing1.54Å1.53Å
NC3sing1.32Å1.33ÅAromatic
C1C4doub1.39Å1.40ÅAromatic
C5N2sing1.47Å1.46Å
C3N1doub1.32Å1.34ÅAromatic
C4N2sing1.38Å1.37Å
C4N1sing1.34Å1.35ÅAromatic
C5H1sing1.09Å1.10Å
C5H2sing1.09Å1.10Å
CH3sing1.09Å1.10Å
CH4sing1.09Å1.10Å
N2H5sing0.97Å1.00Å
C3H6sing1.08Å1.08Å
C2H7sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NC2C1124.7°119.0°
C2NC3115.3°120.6°
NC2H7117.6°120.5°
C2C1C137.0°132.2°
C2C1C4113.0°119.2°
C1C2H7117.7°120.4°
C1CC5103.6°104.3°
CC1C4110.0°108.5°
C1CH3110.9°110.5°
C1CH4111.0°110.4°
CC5N2102.5°105.2°
CC5H1111.2°110.3°
CC5H2111.2°110.4°
C5CH3110.9°110.5°
C5CH4110.9°110.4°
NC3N1127.9°122.1°
NC3H6116.0°118.9°
C1C4N2107.4°111.8°
C1C4N1125.8°118.1°
C5N2C4113.3°110.3°
N2C5H1111.2°110.3°
N2C5H2111.2°110.3°
C5N2H5108.5°124.8°
C3N1C4113.3°120.9°
N1C3H6116.1°119.0°
N2C4N1126.8°130.1°
C4N2H5108.5°124.9°
H1C5H2109.4°110.3°
H3CH4109.4°110.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NC2C1H7180.0°179.8°
NC2C1C179.5°180.0°
NC2C1C40.5°0.1°
C2NC3N11.7°0.1°
C2NC3H6178.2°180.0°
C2C1CC4179.0°179.9°
C2C1CC5169.6°179.9°
C1C2NC30.1°0.1°
C2C1C4N2179.2°180.0°
C2C1C4N10.7°0.0°
C2C1CH371.4°61.2°
C2C1CH450.5°61.4°
C1CC5H3119.1°118.7°
C1CC5H4119.1°118.7°
C1CC5N215.8°0.0°
CC1C4N21.5°0.0°
CC1C4N1178.6°180.0°
C1CC5H1134.7°118.9°
C1CC5H2103.1°119.0°
C1CH3H4122.8°122.5°
CC1C2H70.5°0.1°
C5CC1C49.4°0.0°
CC5N2H1118.9°118.9°
CC5N2H2118.9°119.0°
CC5N2C418.5°0.0°
CC5H1H2123.2°122.2°
C5CH3H4122.7°122.6°
CC5N2H5102.0°180.0°
NC3N1H6180.0°179.9°
NC3N1C42.7°0.0°
C3NC2H7180.0°179.9°
C1C4N2C513.1°0.0°
C1C4N1C32.1°0.0°
C1C4N2N1179.9°180.0°
C4C1CH3109.6°118.7°
C4C1CH4128.5°118.7°
C1C4N2H5107.4°180.0°
C4C1C2H7179.5°179.9°
C5N2C4H5120.6°180.0°
C5N2C4N1167.0°180.0°
N2C5H1H2123.2°122.1°
N2C5CH3103.3°118.7°
N2C5CH4134.9°118.7°
C3N1C4N2177.7°180.0°
C4N2C5H1137.4°118.9°
C4N2C5H2100.4°119.0°
N1C4N2H572.4°0.0°
C4N1C3H6177.3°179.9°
H1C5CH315.6°122.4°
H1C5CH4106.2°0.2°
H1C5N2H516.9°61.1°
H2C5CH3137.8°0.3°
H2C5CH416.0°122.4°
H2C5N2H5139.1°61.0°

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon