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WJD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
COsing1.43Å1.42Å
OC1sing1.43Å1.42Å
C1C2sing1.51Å1.54Å
C2O1doub1.21Å1.21Å
NC2sing1.35Å1.39Å
C3Nsing1.40Å1.44Å
C3C4sing1.39Å1.40ÅAromatic
C4C5doub1.38Å1.38ÅAromatic
C5C6sing1.38Å1.39ÅAromatic
C6C7doub1.38Å1.40ÅAromatic
C7C8sing1.38Å1.38ÅAromatic
C8C3doub1.39Å1.40ÅAromatic
C4H6sing1.08Å1.08Å
C5H7sing1.08Å1.08Å
C6H8sing1.08Å1.08Å
C7H9sing1.08Å1.08Å
C8H10sing1.08Å1.08Å
NH5sing0.97Å1.00Å
CH2sing1.09Å1.10Å
CH1sing1.09Å1.10Å
CHsing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C1H4sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
COC1114.8°114.0°
OCH2109.5°109.4°
OCH1109.5°109.5°
OCH109.5°109.5°
OC1C2106.9°109.4°
OC1H3110.1°109.5°
OC1H4110.1°109.5°
C1C2O1118.2°120.0°
C1C2N117.3°120.0°
C2C1H3110.1°109.4°
C2C1H4110.1°109.4°
O1C2N124.5°120.0°
C2NC3126.9°120.0°
C2NH5116.6°120.0°
NC3C4116.7°120.1°
NC3C8122.9°120.1°
C3NH5116.5°120.0°
C3C4C5119.3°120.0°
C4C3C8120.4°119.8°
C3C4H6120.3°120.0°
C4C5C6120.6°120.0°
C5C4H6120.3°120.0°
C4C5H7119.7°120.0°
C5C6C7119.8°120.1°
C6C5H7119.7°120.0°
C5C6H8120.1°119.9°
C6C7C8120.3°120.1°
C7C6H8120.1°120.0°
C6C7H9119.9°119.9°
C7C8C3119.7°119.9°
C8C7H9119.9°119.9°
C7C8H10120.2°120.1°
C3C8H10120.2°120.0°
H2CH1109.4°109.5°
H2CH109.4°109.5°
H1CH109.5°109.5°
H3C1H4109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
COC1C2173.5°180.0°
OCH2H1120.0°120.0°
OCH2H120.0°120.0°
OCH1H120.0°120.0°
COC1H353.9°60.1°
COC1H466.9°60.0°
OC1C2H3119.6°120.0°
OC1C2H4119.6°120.0°
OC1C2O1159.3°0.0°
OC1C2N21.0°180.0°
C1OCH2180.0°60.0°
C1OCH160.0°180.0°
C1OCH60.0°60.0°
OC1H3H4121.2°120.1°
C1C2O1N179.7°180.0°
C1C2NC3178.8°174.7°
C1C2NH51.2°5.3°
C2C1H3H4121.2°120.0°
O1C2NC31.5°5.2°
O1C2NH5178.5°174.8°
O1C2C1H339.7°120.0°
O1C2C1H481.1°120.0°
C2NC3H5180.0°180.0°
C2NC3C4134.6°33.7°
C2NC3C842.4°146.9°
NC2C1H3140.6°60.0°
NC2C1H498.6°60.0°
NC3C4C8177.0°179.5°
NC3C4C5175.4°180.0°
NC3C8C7175.2°180.0°
NC3C4H64.5°0.3°
NC3C8H104.8°0.2°
C3C4C5H6180.0°179.7°
C3C4C5C60.3°0.3°
C4C3C8C71.7°0.6°
C3C4C5H7179.7°179.8°
C4C3C8H10178.3°179.7°
C4C3NH545.4°146.3°
C4C5C6H7180.0°179.9°
C4C5C6C70.9°0.0°
C5C4C3C81.6°0.6°
C4C5C6H8179.1°179.9°
C5C6C7H8180.0°179.9°
C5C6C7C80.8°0.0°
C6C5C4H6179.8°180.0°
C5C6C7H9179.1°180.0°
C6C7C8H9180.0°180.0°
C6C7C8C30.5°0.3°
C7C6C5H7179.1°180.0°
C6C7C8H10179.6°180.0°
C7C8C3H10180.0°179.7°
C8C7C6H8179.2°179.9°
C8C3C4H6178.4°179.8°
C3C8C7H9179.6°179.8°
C8C3NH5137.6°33.2°
H6C4C5H70.2°0.1°
H7C5C6H80.9°0.0°
H8C6C7H90.9°0.1°
H9C7C8H100.4°0.0°
H2CH1H119.9°120.0°

246704

PDB entries from 2025-12-24

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