Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

WGM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CC1sing1.53Å1.55Å
C2C1sing1.53Å1.55Å
C1C3sing1.54Å1.58Å
C3Nsing1.49Å1.50Å
C4Nsing1.49Å1.50Å
C5C4sing1.54Å1.56Å
C1C5sing1.54Å1.55Å
OC5sing1.43Å1.38Å
NC6sing1.39Å1.45Å
C6N1sing1.32Å1.40ÅAromatic
N1C7doub1.32Å1.37ÅAromatic
C7C8sing1.38Å1.40ÅAromatic
C8C9doub1.39Å1.39ÅAromatic
C9C10sing1.39Å1.42ÅAromatic
C6C10doub1.39Å1.45ÅAromatic
C10Fsing1.35Å1.33Å
C4H9sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
C5H10sing1.09Å1.10Å
C7H12sing1.08Å1.08Å
C8H13sing1.08Å1.08Å
CH1sing1.09Å1.10Å
CHsing1.09Å1.10Å
CH2sing1.09Å1.10Å
OH11sing0.97Å0.95Å
C2H4sing1.09Å1.10Å
C2H5sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
C3H7sing1.09Å1.10Å
C3H6sing1.09Å1.10Å
C9H14sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CC1C2109.2°110.3°
CC1C3110.9°110.3°
CC1C5111.9°110.4°
C1CH1109.5°109.5°
C1CH109.5°109.5°
C1CH2109.4°109.5°
C2C1C3112.1°110.3°
C2C1C5110.8°110.4°
C1C2H4109.5°109.5°
C1C2H5109.5°109.5°
C1C2H3109.5°109.4°
C1C3N105.5°104.6°
C3C1C5101.6°105.0°
C1C3H7110.4°110.4°
C1C3H6110.4°110.4°
C3NC4110.6°104.2°
C3NC6126.2°111.0°
NC3H7110.5°110.5°
NC3H6110.5°110.4°
NC4C5101.9°104.6°
C4NC6122.3°111.0°
NC4H9111.3°110.4°
NC4H8111.3°110.4°
C4C5C1104.2°105.1°
C4C5O111.0°110.3°
C5C4H9111.3°110.4°
C5C4H8111.4°110.5°
C4C5H10110.2°110.3°
C1C5O108.0°110.4°
C1C5H10110.3°110.3°
OC5H10112.9°110.2°
C5OH11109.5°114.0°
NC6N1117.3°119.7°
NC6C10123.8°119.7°
C6N1C7119.0°121.6°
N1C6C10118.9°120.6°
N1C7C8123.7°120.9°
N1C7H12118.2°119.5°
C7C8C9118.7°119.3°
C8C7H12118.2°119.5°
C7C8H13120.7°120.4°
C8C9C10119.6°118.5°
C9C8H13120.6°120.3°
C8C9H14120.2°120.8°
C9C10C6120.1°119.0°
C9C10F117.2°120.5°
C10C9H14120.2°120.7°
C6C10F122.7°120.5°
H9C4H8109.5°110.4°
H1CH109.5°109.5°
H1CH2109.5°109.5°
HCH2109.5°109.4°
H4C2H5109.4°109.4°
H4C2H3109.5°109.5°
H5C2H3109.5°109.5°
H7C3H6109.4°110.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CC1C2C3123.4°122.1°
CC1C2C5123.8°122.2°
CC1C3C5119.2°118.9°
CC1C3N94.8°142.8°
CC1C5C479.8°118.9°
CC1C5O162.2°122.1°
CC1C5H1038.4°0.0°
C1CH1H120.0°120.0°
C1CH1H2120.0°120.0°
C1CHH2120.0°120.0°
CC1C2H4180.0°59.3°
CC1C2H560.0°179.3°
CC1C2H360.0°60.7°
CC1C3H7145.8°24.0°
CC1C3H624.6°98.5°
C2C1C3C5118.4°119.0°
C2C1C3N142.8°95.1°
C2C1C5C4158.0°118.9°
C2C1C5O40.0°0.1°
C2C1C5H1083.8°122.2°
C2C1CH1180.0°60.7°
C2C1CH60.0°59.4°
C2C1CH260.0°179.3°
C1C2H4H5120.0°120.0°
C1C2H4H3120.0°120.0°
C1C2H5H3120.0°120.0°
C2C1C3H723.4°146.1°
C2C1C3H697.8°23.6°
C1C3NH7119.4°118.8°
C1C3NH6119.4°118.7°
C1C3NC40.8°39.5°
C3C1C5C438.7°0.0°
C3C1C5O79.4°119.0°
C1C3NC6168.5°159.0°
C3C1C5H10156.9°118.9°
C3C1CH155.9°61.4°
C3C1CH64.1°178.5°
C3C1CH2175.9°58.6°
C3C1C2H456.6°62.8°
C3C1C2H5176.6°57.2°
C3C1C2H363.4°177.2°
C1C3H7H6121.8°122.4°
C3NC4C6169.8°119.5°
C3NC4C523.0°39.5°
NC3C1C524.4°23.9°
C3NC6N1165.8°4.7°
C3NC6C1014.3°175.2°
C3NC4H9141.8°79.3°
C3NC4H895.8°158.4°
NC3H7H6121.9°122.4°
NC4C5H9118.8°118.8°
NC4C5H8118.8°118.8°
NC4C5C138.3°23.9°
NC4C5O77.6°95.2°
C4NC6N12.3°120.1°
C4NC6C10177.6°59.8°
NC4H9H8123.5°122.4°
NC4C5H10156.6°142.8°
C4NC3H7118.6°79.3°
C4NC3H6120.2°158.2°
C4C5C1O118.0°119.0°
C4C5C1H10118.2°118.9°
C4C5OH10124.2°122.1°
C5C4NC6167.2°159.0°
C5C4H9H8123.5°122.4°
C4C5OH11180.0°61.4°
C1C5OH10122.2°122.1°
C1C5C4H9157.1°94.9°
C1C5C4H880.5°142.7°
C5C1CH156.9°177.1°
C5C1CH176.9°62.9°
C5C1CH263.1°57.1°
C1C5OH1166.4°177.2°
C5C1C2H456.2°178.5°
C5C1C2H563.8°58.5°
C5C1C2H3176.2°61.5°
C5C1C3H795.0°95.0°
C5C1C3H6143.8°142.6°
OC5C4H941.1°146.0°
OC5C4H8163.6°23.7°
NC6N1C10179.9°179.9°
NC6N1C7179.6°180.0°
NC6C10C9178.8°180.0°
NC6C10F3.7°0.1°
C6NC4H948.5°40.2°
C6NC4H874.0°82.1°
C6NC3H772.1°40.2°
C6NC3H649.1°82.2°
C6N1C7C80.4°0.0°
N1C6C10C91.2°0.1°
N1C6C10F176.3°180.0°
C6N1C7H12179.6°180.0°
N1C7C8H12180.0°180.0°
N1C7C8C90.4°0.1°
C7N1C6C100.5°0.0°
N1C7C8H13179.5°179.9°
C7C8C9H13180.0°180.0°
C7C8C9C100.3°0.0°
C7C8C9H14179.7°180.0°
C8C9C10H14180.0°179.9°
C8C9C10C61.2°0.0°
C8C9C10F176.5°180.0°
C9C8C7H12179.6°180.0°
C9C10C6F177.5°179.9°
C10C9C8H13179.7°180.0°
C6C10C9H14178.9°179.9°
FC10C9H143.5°0.0°
H9C4C5H1084.6°24.0°
H8C4C5H1037.8°98.4°
H10C5OH1155.8°60.7°
H12C7C8H130.5°0.0°
H13C8C9H140.3°0.0°
H1CHH2120.0°120.0°
H4C2H5H3120.0°120.0°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon