WGB
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
OXT | C | sing | 1.34Å | 1.36Å | |
O | C | doub | 1.21Å | 1.22Å | |
O03 | N02 | sing | 1.22Å | 1.24Å | |
O04 | N02 | doub | 1.22Å | 1.24Å | |
N | CA | sing | 1.47Å | 1.49Å | |
N | C10 | sing | 1.47Å | 1.45Å | |
N | H | sing | 1.01Å | 1.00Å | |
N02 | C09 | sing | 1.35Å | 1.47Å | |
C01 | CA | sing | 1.53Å | 1.54Å | |
C01 | C03 | sing | 1.51Å | 1.52Å | |
C01 | H02 | sing | 1.09Å | 1.10Å | |
C01 | H01 | sing | 1.09Å | 1.10Å | |
CA | C | sing | 1.51Å | 1.54Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C03 | C05 | doub | 1.39Å | 1.40Å | Aromatic |
C03 | C04 | sing | 1.39Å | 1.40Å | Aromatic |
C04 | C07 | doub | 1.38Å | 1.40Å | Aromatic |
C04 | H05 | sing | 1.08Å | 1.08Å | |
C05 | C08 | sing | 1.38Å | 1.40Å | Aromatic |
C05 | H06 | sing | 1.08Å | 1.08Å | |
C07 | C09 | sing | 1.41Å | 1.40Å | Aromatic |
C07 | H07 | sing | 1.08Å | 1.08Å | |
C08 | C09 | doub | 1.41Å | 1.40Å | Aromatic |
C08 | H08 | sing | 1.08Å | 1.08Å | |
C10 | H09 | sing | 1.09Å | 1.10Å | |
C10 | H10 | sing | 1.09Å | 1.10Å | |
C10 | H11 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
O03 | H03 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
OXT | C | O | 119.3° | 120.0° |
OXT | C | CA | 113.7° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
O | C | CA | 126.7° | 120.0° |
O03 | N02 | O04 | 124.6° | 120.0° |
O03 | N02 | C09 | 117.7° | 120.0° |
N02 | O03 | H03 | 109.5° | 117.0° |
O04 | N02 | C09 | 117.7° | 120.0° |
CA | N | C10 | 113.0° | 111.0° |
CA | N | H | 108.6° | 111.0° |
N | CA | C01 | 114.5° | 109.5° |
N | CA | C | 110.4° | 109.5° |
N | CA | HA | 107.4° | 109.5° |
C10 | N | H | 108.6° | 111.1° |
N | C10 | H09 | 109.5° | 109.5° |
N | C10 | H10 | 109.4° | 109.5° |
N | C10 | H11 | 109.4° | 109.5° |
N02 | C09 | C07 | 119.8° | 120.3° |
N02 | C09 | C08 | 119.7° | 120.3° |
CA | C01 | C03 | 116.3° | 109.4° |
CA | C01 | H02 | 107.8° | 109.5° |
CA | C01 | H01 | 107.7° | 109.4° |
C01 | CA | C | 110.7° | 109.5° |
C01 | CA | HA | 106.7° | 109.5° |
C03 | C01 | H02 | 107.8° | 109.5° |
C03 | C01 | H01 | 107.8° | 109.5° |
C01 | C03 | C05 | 120.3° | 119.7° |
C01 | C03 | C04 | 120.8° | 119.8° |
H02 | C01 | H01 | 109.5° | 109.5° |
C | CA | HA | 106.8° | 109.4° |
C05 | C03 | C04 | 118.9° | 120.5° |
C03 | C05 | C08 | 120.7° | 120.2° |
C03 | C05 | H06 | 119.6° | 119.9° |
C03 | C04 | C07 | 120.8° | 120.2° |
C03 | C04 | H05 | 119.6° | 119.9° |
C07 | C04 | H05 | 119.6° | 119.9° |
C04 | C07 | C09 | 119.5° | 119.8° |
C04 | C07 | H07 | 120.3° | 120.1° |
C08 | C05 | H06 | 119.7° | 119.8° |
C05 | C08 | C09 | 119.5° | 119.8° |
C05 | C08 | H08 | 120.2° | 120.2° |
C09 | C07 | H07 | 120.2° | 120.1° |
C07 | C09 | C08 | 120.5° | 119.5° |
C09 | C08 | H08 | 120.3° | 120.1° |
H09 | C10 | H10 | 109.5° | 109.4° |
H09 | C10 | H11 | 109.5° | 109.4° |
H10 | C10 | H11 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OXT | C | O | CA | 174.3° | 180.0° |
OXT | C | CA | N | 25.5° | 153.7° |
OXT | C | CA | C01 | 153.4° | 86.3° |
OXT | C | CA | HA | 90.8° | 33.6° |
O | C | CA | N | 159.9° | 26.3° |
O | C | CA | C01 | 32.1° | 93.7° |
O | C | CA | HA | 83.7° | 146.3° |
O | C | OXT | HXT | 0.0° | 0.1° |
O03 | N02 | O04 | C09 | 179.7° | 179.9° |
O03 | N02 | C09 | C07 | 0.9° | 180.0° |
O03 | N02 | C09 | C08 | 178.8° | 0.1° |
O04 | N02 | C09 | C07 | 179.3° | 0.1° |
O04 | N02 | C09 | C08 | 1.0° | 180.0° |
O04 | N02 | O03 | H03 | 0.0° | 0.0° |
CA | N | C10 | H | 120.5° | 124.0° |
N | CA | C01 | C | 125.5° | 120.0° |
N | CA | C01 | HA | 118.6° | 120.1° |
N | CA | C01 | C03 | 58.0° | 65.0° |
N | CA | C01 | H02 | 179.0° | 175.0° |
N | CA | C01 | H01 | 63.0° | 55.0° |
N | CA | C | HA | 116.4° | 120.0° |
CA | N | C10 | H09 | 180.0° | 179.2° |
CA | N | C10 | H10 | 60.0° | 59.2° |
CA | N | C10 | H11 | 60.0° | 60.9° |
C10 | N | CA | C01 | 68.3° | 155.7° |
C10 | N | CA | C | 166.0° | 84.3° |
C10 | N | CA | HA | 50.0° | 35.6° |
N | C10 | H09 | H10 | 120.0° | 120.1° |
N | C10 | H09 | H11 | 120.0° | 120.0° |
N | C10 | H10 | H11 | 120.0° | 120.0° |
H | N | CA | C01 | 171.2° | 80.3° |
H | N | CA | C | 45.5° | 39.7° |
H | N | CA | HA | 70.5° | 159.7° |
H | N | C10 | H09 | 59.5° | 56.8° |
H | N | C10 | H10 | 179.5° | 176.8° |
H | N | C10 | H11 | 60.5° | 63.1° |
N02 | C09 | C07 | C04 | 179.7° | 180.0° |
N02 | C09 | C08 | C05 | 179.6° | 179.4° |
N02 | C09 | C07 | C08 | 179.7° | 179.9° |
N02 | C09 | C07 | H07 | 0.3° | 0.1° |
N02 | C09 | C08 | H08 | 0.4° | 0.6° |
C09 | N02 | O03 | H03 | 179.7° | 179.9° |
CA | C01 | C03 | H02 | 121.0° | 120.0° |
CA | C01 | C03 | H01 | 121.0° | 120.0° |
CA | C01 | H02 | H01 | 116.9° | 120.0° |
C01 | CA | C | HA | 115.8° | 119.9° |
CA | C01 | C03 | C05 | 91.0° | 90.0° |
CA | C01 | C03 | C04 | 89.3° | 90.0° |
C03 | C01 | H02 | H01 | 116.9° | 120.0° |
C03 | C01 | CA | C | 67.5° | 175.0° |
C03 | C01 | CA | HA | 176.6° | 55.1° |
C01 | C03 | C05 | C04 | 179.7° | 180.0° |
C01 | C03 | C04 | C07 | 179.9° | 180.0° |
C01 | C03 | C04 | H05 | 0.1° | 0.3° |
C01 | C03 | C05 | C08 | 179.8° | 179.5° |
C01 | C03 | C05 | H06 | 0.2° | 0.2° |
H02 | C01 | CA | C | 53.5° | 55.0° |
H02 | C01 | CA | HA | 62.4° | 64.9° |
H02 | C01 | C03 | C05 | 30.0° | 150.0° |
H02 | C01 | C03 | C04 | 149.7° | 30.0° |
H01 | C01 | CA | C | 171.5° | 65.0° |
H01 | C01 | CA | HA | 55.6° | 175.0° |
H01 | C01 | C03 | C05 | 148.0° | 30.0° |
H01 | C01 | C03 | C04 | 31.7° | 150.0° |
CA | C | OXT | HXT | 175.0° | 179.9° |
C05 | C03 | C04 | C07 | 0.3° | 0.0° |
C05 | C03 | C04 | H05 | 179.7° | 179.7° |
C03 | C05 | C08 | H06 | 180.0° | 179.3° |
C03 | C05 | C08 | C09 | 0.3° | 0.8° |
C03 | C05 | C08 | H08 | 179.7° | 179.2° |
C03 | C04 | C07 | H05 | 180.0° | 179.7° |
C04 | C03 | C05 | C08 | 0.4° | 0.5° |
C04 | C03 | C05 | H06 | 179.5° | 179.8° |
C03 | C04 | C07 | C09 | 0.1° | 0.3° |
C03 | C04 | C07 | H07 | 179.9° | 179.8° |
C04 | C07 | C09 | H07 | 180.0° | 179.9° |
C04 | C07 | C09 | C08 | 0.0° | 0.1° |
H05 | C04 | C07 | C09 | 179.9° | 180.0° |
H05 | C04 | C07 | H07 | 0.1° | 0.1° |
C05 | C08 | C09 | C07 | 0.1° | 0.5° |
C05 | C08 | C09 | H08 | 180.0° | 180.0° |
H06 | C05 | C08 | C09 | 179.7° | 180.0° |
H06 | C05 | C08 | H08 | 0.4° | 0.1° |
C07 | C09 | C08 | H08 | 179.9° | 179.5° |
H07 | C07 | C09 | C08 | 180.0° | 180.0° |
H09 | C10 | H10 | H11 | 120.0° | 119.9° |