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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6C6sing1.38Å1.33Å
C6N1doub1.33Å1.34ÅAromatic
C6C5sing1.41Å1.32ÅAromatic
N1C2sing1.32Å1.48ÅAromatic
C5N7sing1.36Å1.33ÅAromatic
C5C4doub1.40Å1.34ÅAromatic
N7C8doub1.30Å1.33ÅAromatic
C2N3doub1.32Å1.47ÅAromatic
C4N3sing1.33Å1.33ÅAromatic
C4N9sing1.37Å1.34ÅAromatic
C8N9sing1.36Å1.35ÅAromatic
N9C1'sing1.47Å1.51Å
C1'O4'sing1.44Å1.46Å
C1'C2'sing1.54Å1.52Å
O4'C4'sing1.44Å1.46Å
C2'C3'sing1.55Å1.49Å
C2'O2'sing1.43Å1.42Å
C5'O5'sing1.43Å1.43Å
C5'C4'sing1.53Å1.58Å
O5'Psing1.61Å1.67Å
C3'C4'sing1.54Å1.57Å
C3'O3'sing1.43Å1.42Å
OP1Pdoub1.48Å1.52Å
PNsing1.68Å1.62Å
POP2sing1.61Å1.49Å
NCAsing1.47Å1.47Å
OCdoub1.21Å1.26Å
CACsing1.51Å1.51Å
CACBsing1.53Å1.56Å
COXTsing1.34Å1.25Å
OE1CDdoub1.21Å1.26Å
CGCBsing1.53Å1.53Å
CGCDsing1.51Å1.54Å
CDOE2sing1.34Å1.25Å
C2H1sing1.08Å1.08Å
CAH2sing1.09Å1.10Å
CBH3sing1.09Å1.10Å
CBH4sing1.09Å1.10Å
CGH5sing1.09Å1.10Å
CGH6sing1.09Å1.10Å
C1'H7sing1.09Å1.10Å
C2'H8sing1.09Å1.10Å
O2'H9sing0.97Å0.95Å
OP2H10sing0.97Å0.95Å
C3'H11sing1.09Å1.10Å
O3'H12sing0.97Å0.95Å
C4'H13sing1.09Å1.10Å
C5'H14sing1.09Å1.10Å
C5'H15sing1.09Å1.10Å
OE2H16sing0.97Å0.95Å
OXTH17sing0.97Å0.95Å
NH18sing1.01Å1.00Å
C8H19sing1.08Å1.08Å
N6H20sing0.97Å1.00Å
N6H21sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6C6N1120.9°120.8°
N6C6C5116.0°120.8°
C6N6H20109.5°120.0°
C6N6H21109.5°120.0°
N1C6C5122.7°118.5°
C6N1C2121.9°121.2°
C6C5N7131.0°134.6°
C6C5C4120.9°118.2°
N1C2N3108.8°122.4°
N1C2H1125.6°118.8°
N7C5C4108.0°107.2°
C5N7C8108.5°109.3°
C5C4N3119.9°119.1°
C5C4N9108.0°106.0°
N7C8N9107.9°110.0°
N7C8H19126.1°125.0°
C2N3C4125.2°120.7°
N3C2H1125.6°118.8°
N3C4N9132.0°134.9°
C4N9C8107.5°107.5°
C4N9C1'130.2°126.3°
C8N9C1'122.3°126.2°
N9C8H19126.1°125.0°
N9C1'O4'113.8°110.4°
N9C1'C2'109.9°110.4°
N9C1'H7109.0°110.4°
O4'C1'C2'105.6°104.8°
C1'O4'C4'108.3°105.3°
O4'C1'H7109.7°110.4°
C1'C2'C3'101.5°104.0°
C1'C2'O2'112.5°110.5°
C2'C1'H7108.8°110.3°
C1'C2'H8110.0°110.5°
O4'C4'C5'107.2°110.5°
O4'C4'C3'105.1°104.8°
O4'C4'H13109.8°110.4°
C3'C2'O2'110.5°110.5°
C2'C3'C4'104.7°104.0°
C2'C3'O3'104.6°110.5°
C3'C2'H8110.5°110.5°
C2'C3'H11111.0°110.5°
O2'C2'H8111.5°110.6°
C2'O2'H9109.5°114.1°
O5'C5'C4'111.2°109.5°
C5'O5'P124.3°123.0°
O5'C5'H14109.0°109.5°
O5'C5'H15109.0°109.5°
C5'C4'C3'117.9°110.4°
C5'C4'H13108.3°110.3°
C4'C5'H14109.0°109.5°
C4'C5'H15109.0°109.4°
O5'POP1116.4°109.5°
O5'PN99.9°109.5°
O5'POP2101.4°109.5°
C4'C3'O3'114.1°110.5°
C4'C3'H11109.9°110.5°
C3'C4'H13108.4°110.4°
O3'C3'H11112.1°110.6°
C3'O3'H12109.5°114.0°
OP1PN107.6°109.5°
OP1POP2118.6°109.5°
NPOP2111.5°109.5°
PNCA108.4°111.0°
PNH18109.8°111.0°
POP2H10109.5°114.0°
NCAC109.4°109.5°
NCACB114.5°109.5°
NCAH2108.5°109.5°
CANH18109.7°111.0°
OCCA116.6°120.0°
OCOXT128.3°120.0°
CCACB108.9°109.4°
CACOXT115.1°120.0°
CCAH2108.0°109.5°
CACBCG113.9°109.4°
CBCAH2107.4°109.5°
CACBH3108.4°109.5°
CACBH4108.4°109.5°
COXTH17109.5°117.0°
OE1CDCG118.0°120.0°
OE1CDOE2124.5°120.0°
CBCGCD107.6°109.5°
CGCBH3108.3°109.4°
CGCBH4108.3°109.5°
CBCGH5109.9°109.5°
CBCGH6109.9°109.5°
CGCDOE2117.5°120.0°
CDCGH5109.9°109.5°
CDCGH6110.0°109.5°
CDOE2H16109.5°117.0°
H3CBH4109.5°109.5°
H5CGH6109.4°109.5°
H14C5'H15109.5°109.5°
H20N6H21109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6C6N1C5172.3°180.0°
N6C6N1C2179.1°180.0°
N6C6C5N73.7°0.0°
N6C6C5C4178.5°180.0°
C6N6H20H21120.0°180.0°
N1C6C5N7176.3°180.0°
N1C6C5C45.8°0.0°
C6N1C2N37.5°0.0°
C6N1C2H1172.5°180.0°
N1C6N6H200.0°0.1°
N1C6N6H21120.0°180.0°
C5C6N1C28.6°0.0°
C6C5N7C4178.1°180.0°
C6C5N7C8176.1°180.0°
C6C5C4N32.9°0.0°
C6C5C4N9176.4°180.0°
C5C6N6H20172.8°180.0°
C5C6N6H2152.8°0.0°
N1C2N3H1180.0°180.0°
N1C2N3C45.0°0.0°
N7C5C4N3178.8°180.0°
N7C5C4N91.9°0.0°
C5N7C8N91.3°0.0°
C5N7C8H19178.7°180.0°
C4C5N7C82.0°0.0°
C5C4N3C23.1°0.0°
C5C4N3N9179.2°179.9°
C5C4N9C81.1°0.0°
C5C4N9C1'179.1°180.0°
N7C8N9C40.1°0.0°
N7C8N9H19180.0°180.0°
N7C8N9C1'179.7°180.0°
C2N3C4N9176.1°180.0°
N3C4N9C8179.7°180.0°
N3C4N9C1'0.2°0.1°
C4N3C2H1174.9°180.0°
C4N9C8C1'179.9°179.9°
C4N9C1'O4'24.4°156.5°
C4N9C1'C2'142.6°88.1°
C4N9C1'H798.3°34.1°
C4N9C8H19179.9°180.0°
C8N9C1'O4'155.4°23.6°
C8N9C1'C2'37.2°91.8°
C8N9C1'H781.9°145.9°
N9C1'O4'C2'120.6°118.9°
N9C1'O4'H7122.3°122.3°
N9C1'C2'H7119.2°122.3°
N9C1'O4'C4'93.0°159.3°
N9C1'C2'C3'84.6°142.9°
N9C1'C2'O2'157.3°98.5°
N9C1'C2'H832.4°24.2°
C1'N9C8H190.3°0.0°
O4'C1'C2'H7117.7°118.8°
O4'C1'C2'C3'38.5°24.0°
O4'C1'C2'O2'79.6°142.6°
C1'O4'C4'C5'120.6°159.4°
C1'O4'C4'C3'5.6°40.5°
O4'C1'C2'H8155.5°94.7°
C1'O4'C4'H13122.0°78.4°
C2'C1'O4'C4'27.6°40.5°
C1'C2'C3'O2'119.5°118.7°
C1'C2'C3'H8116.6°118.6°
C1'C2'O2'H8124.1°122.7°
C1'C2'C3'C4'34.1°0.0°
C1'C2'C3'O3'154.5°118.7°
C1'C2'O2'H9180.0°180.0°
C1'C2'C3'H1184.4°118.6°
O4'C4'C3'C2'18.7°24.0°
O4'C4'C5'O5'135.7°69.5°
O4'C4'C5'C3'118.2°115.5°
O4'C4'C5'H13118.5°122.3°
O4'C4'C3'H13117.4°118.9°
O4'C4'C3'O3'132.5°142.6°
C4'O4'C1'H7144.6°78.3°
O4'C4'C3'H11100.6°94.6°
O4'C4'C5'H14104.0°170.5°
O4'C4'C5'H1515.5°50.5°
C3'C2'O2'H8123.3°122.7°
C2'C3'C4'C5'138.0°142.9°
C2'C3'C4'O3'113.8°118.6°
C2'C3'C4'H11119.3°118.6°
C2'C3'O3'H11120.4°122.7°
C3'C2'C1'H7156.2°94.9°
C3'C2'O2'H967.4°65.3°
C2'C3'O3'H12180.0°61.5°
C2'C3'C4'H1398.6°94.9°
O2'C2'C3'C4'85.4°118.7°
O2'C2'C3'O3'34.9°0.0°
O2'C2'C1'H738.1°23.8°
O2'C2'C3'H11156.1°122.7°
O5'C5'C4'H14120.2°120.0°
O5'C5'C4'H15120.2°120.0°
O5'C5'C4'C3'17.6°175.0°
C5'O5'POP1134.1°50.0°
C5'O5'PN110.4°70.0°
C5'O5'POP24.0°170.0°
O5'C5'C4'H13105.8°52.8°
O5'C5'H14H15119.2°120.1°
C4'C5'O5'P83.8°180.0°
C5'C4'C3'H13123.3°122.2°
C5'C4'C3'O3'108.2°98.4°
C5'C4'C3'H1118.7°24.3°
C4'C5'H14H15119.2°120.0°
O5'POP1N111.0°120.0°
O5'POP1OP2121.4°120.0°
O5'PNOP2106.5°120.0°
O5'PNCA169.1°60.0°
O5'POP2H10128.8°60.0°
PO5'C5'H1436.4°60.0°
PO5'C5'H15155.9°60.0°
O5'PNH1849.3°63.9°
C4'C3'O3'H11125.8°122.7°
C4'C3'C2'H8150.7°118.6°
C4'C3'O3'H1266.2°176.1°
C3'C4'C5'H14137.8°55.0°
C3'C4'C5'H15102.7°65.0°
O3'C3'C2'H888.9°122.7°
O3'C3'C4'H1315.1°23.7°
OP1PNOP2131.6°120.0°
OP1PNCA69.0°180.0°
OP1POP2H100.0°180.0°
OP1PNH18171.2°56.1°
PNCAH18119.8°123.9°
PNCAC171.1°95.0°
PNCACB66.4°145.0°
PNCAH253.6°25.0°
NPOP2H10125.7°60.0°
OP2PNCA62.6°60.0°
OP2PNH1857.2°176.1°
NCACO17.6°0.0°
NCACCB125.9°120.0°
NCACH2117.8°120.0°
NCACBH2120.5°120.1°
NCACOXT162.1°179.9°
NCACBCG45.1°65.0°
NCACBH3165.8°54.9°
NCACBH475.5°175.0°
OCCAOXT179.7°179.9°
OCCACB108.3°120.0°
OCCAH2135.4°120.0°
OCOXTH170.0°0.1°
CCACBH2116.7°120.0°
CCACBCG77.7°175.0°
CCACBH342.9°65.0°
CCACBH4161.6°55.0°
CACOXTH17179.7°180.0°
CCANH1869.1°141.1°
CBCACOXT72.0°60.0°
CACBCGH3120.7°120.0°
CACBCGH4120.7°120.0°
CACBCGCD139.9°180.0°
CACBH3H4118.0°120.1°
CACBCGH520.1°60.0°
CACBCGH6100.4°60.0°
CBCANH1853.5°21.1°
OXTCCAH244.3°60.0°
OE1CDCGCB118.7°0.0°
OE1CDCGOE2178.1°180.0°
OE1CDCGH51.1°120.0°
OE1CDCGH6121.6°120.0°
OE1CDOE2H160.0°0.0°
CBCGCDH5119.7°120.0°
CBCGCDH6119.7°120.0°
CBCGCDOE263.2°180.0°
CGCBCAH2165.6°55.0°
CGCBH3H4117.9°120.0°
CBCGH5H6120.8°120.0°
CDCGCBH399.4°60.0°
CDCGCBH419.2°60.0°
CDCGH5H6120.9°120.0°
CGCDOE2H16178.0°180.0°
OE2CDCGH5177.0°60.0°
OE2CDCGH656.5°60.0°
H2CACBH373.7°175.0°
H2CACBH445.0°65.0°
H2CANH18173.4°99.0°
H3CBCGH5140.8°180.0°
H3CBCGH620.3°60.0°
H4CBCGH5100.5°60.0°
H4CBCGH6139.0°180.0°
H7C1'C2'H886.9°146.5°
H8C2'O2'H955.9°57.3°
H8C2'C3'H1132.2°0.0°
H11C3'O3'H1259.6°61.2°
H11C3'C4'H13142.0°146.5°
H13C4'C5'H1414.4°67.2°
H13C4'C5'H15133.9°172.8°

251801

PDB entries from 2026-04-08

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