Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

WDK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C24N4sing1.47Å1.46Å
C25N4sing1.47Å1.45Å
N4C23sing1.47Å1.46Å
N6C30trip1.14Å1.11Å
C23C22sing1.53Å1.53Å
C31C32doub1.38Å1.39ÅAromatic
C31C29sing1.40Å1.39ÅAromatic
C30C29sing1.43Å1.52Å
C32C33sing1.38Å1.39ÅAromatic
C29C28doub1.40Å1.39ÅAromatic
C22C21sing1.53Å1.53Å
C21N3sing1.47Å1.46Å
C33C34doub1.38Å1.39ÅAromatic
C28C34sing1.38Å1.40ÅAromatic
C28C27sing1.51Å1.53Å
N3C20sing1.35Å1.34Å
C27C26sing1.53Å1.55Å
C20O2doub1.21Å1.19Å
C20C19sing1.51Å1.53Å
C19C11sing1.53Å1.53Å
C26N5sing1.47Å1.46Å
C26C1sing1.51Å1.53Å
O1C1doub1.21Å1.19Å
C1N1sing1.35Å1.33Å
C11N2sing1.46Å1.45Å
C11C12sing1.53Å1.53Å
N1C2sing1.46Å1.45Å
N2C10sing1.35Å1.33Å
O3C10doub1.21Å1.19Å
C12C13sing1.51Å1.53Å
C10C2sing1.51Å1.53Å
C2C3sing1.53Å1.53Å
C13C18doub1.38Å1.39ÅAromatic
C13C14sing1.38Å1.39ÅAromatic
C3C4sing1.51Å1.53Å
C18C17sing1.38Å1.39ÅAromatic
C14C15doub1.38Å1.39ÅAromatic
C9C4doub1.38Å1.39ÅAromatic
C9C8sing1.38Å1.39ÅAromatic
C4C5sing1.38Å1.39ÅAromatic
C8C7doub1.38Å1.40ÅAromatic
C5CL1sing1.74Å1.73Å
C5C6doub1.38Å1.39ÅAromatic
C17C16doub1.38Å1.39ÅAromatic
C15C16sing1.38Å1.39ÅAromatic
C7C6sing1.38Å1.38ÅAromatic
C7CL2sing1.74Å1.73Å
C16F1sing1.35Å1.35Å
C11H1sing1.09Å1.10Å
C12H2sing1.09Å1.10Å
C12H3sing1.09Å1.10Å
C14H4sing1.08Å1.08Å
C15H5sing1.08Å1.08Å
C17H6sing1.08Å1.08Å
C18H7sing1.08Å1.08Å
C19H8sing1.09Å1.10Å
C19H9sing1.09Å1.10Å
C2H10sing1.09Å1.10Å
C21H11sing1.09Å1.10Å
C21H12sing1.09Å1.10Å
C22H13sing1.09Å1.10Å
C22H14sing1.09Å1.10Å
C23H15sing1.09Å1.10Å
C23H16sing1.09Å1.10Å
C24H17sing1.09Å1.10Å
C24H18sing1.09Å1.10Å
C24H19sing1.09Å1.10Å
C25H20sing1.09Å1.10Å
C25H21sing1.09Å1.10Å
C25H22sing1.09Å1.10Å
C26H23sing1.09Å1.10Å
C27H24sing1.09Å1.10Å
C27H25sing1.09Å1.10Å
C3H26sing1.09Å1.10Å
C3H27sing1.09Å1.10Å
C31H28sing1.08Å1.08Å
C32H29sing1.08Å1.08Å
C33H30sing1.08Å1.08Å
C34H31sing1.08Å1.08Å
C6H32sing1.08Å1.08Å
C8H33sing1.08Å1.08Å
C9H34sing1.08Å1.08Å
N1H35sing0.97Å1.00Å
N2H36sing0.97Å1.00Å
N3H37sing0.97Å1.00Å
N5H39sing1.01Å1.00Å
N5H40sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C24N4C25109.3°111.0°
C24N4C23109.8°111.0°
N4C24H17109.5°109.4°
N4C24H18109.5°109.4°
N4C24H19109.5°109.4°
C25N4C23110.6°111.0°
N4C25H20109.5°109.4°
N4C25H21109.5°109.5°
N4C25H22109.5°109.5°
N4C23C22112.3°109.4°
N4C23H15108.8°109.5°
N4C23H16108.8°109.5°
N6C30C29179.5°180.0°
C23C22C21112.0°109.4°
C23C22H13108.8°109.5°
C23C22H14108.8°109.4°
C22C23H15108.8°109.5°
C22C23H16108.7°109.5°
C32C31C29119.3°119.9°
C31C32C33120.1°120.1°
C32C31H28120.4°120.0°
C31C32H29119.9°119.9°
C31C29C30119.3°120.2°
C31C29C28121.0°119.7°
C29C31H28120.3°120.1°
C30C29C28119.7°120.2°
C32C33C34120.3°120.3°
C33C32H29120.0°119.9°
C32C33H30119.8°119.9°
C29C28C34119.3°119.9°
C29C28C27121.3°120.0°
C22C21N3109.1°109.4°
C22C21H11109.6°109.5°
C22C21H12109.5°109.5°
C21C22H13108.8°109.5°
C21C22H14108.8°109.5°
C21N3C20122.9°120.0°
N3C21H11109.6°109.4°
N3C21H12109.6°109.4°
C21N3H37118.6°120.0°
C33C34C28120.0°120.1°
C34C33H30119.9°119.8°
C33C34H31120.0°119.9°
C34C28C27119.4°120.1°
C28C34H31120.0°120.0°
C28C27C26108.5°109.4°
C28C27H24109.7°109.5°
C28C27H25109.7°109.4°
N3C20O2120.9°120.0°
N3C20C19119.4°120.0°
C20N3H37118.6°120.0°
C27C26N5112.0°109.5°
C27C26C1110.5°109.4°
C27C26H23108.1°109.5°
C26C27H24109.7°109.5°
C26C27H25109.7°109.5°
O2C20C19119.6°120.0°
C20C19C11110.6°109.5°
C20C19H8109.2°109.4°
C20C19H9109.2°109.5°
C19C11N2110.8°109.5°
C19C11C12111.1°109.5°
C19C11H1108.7°109.5°
C11C19H8109.2°109.5°
C11C19H9109.2°109.5°
N5C26C1108.7°109.5°
N5C26H23109.2°109.5°
C26N5H39109.5°111.0°
C26N5H40109.4°111.0°
C26C1O1120.3°120.0°
C26C1N1118.9°120.0°
C1C26H23108.3°109.5°
O1C1N1120.9°120.0°
C1N1C2122.2°120.0°
C1N1H35118.9°120.0°
N2C11C12107.8°109.5°
C11N2C10122.5°120.0°
N2C11H1109.7°109.4°
C11N2H36118.7°120.0°
C11C12C13106.1°109.5°
C12C11H1108.7°109.5°
C11C12H2110.3°109.5°
C11C12H3110.3°109.4°
N1C2C10108.6°109.5°
N1C2C3110.0°109.5°
N1C2H10110.4°109.5°
C2N1H35118.9°120.0°
N2C10O3121.0°120.0°
N2C10C2119.2°120.0°
C10N2H36118.7°120.0°
O3C10C2119.8°119.9°
C12C13C18120.1°120.0°
C12C13C14120.1°120.0°
C13C12H2110.3°109.5°
C13C12H3110.3°109.5°
C10C2C3109.3°109.5°
C10C2H10109.3°109.5°
C2C3C4108.0°109.5°
C3C2H10109.3°109.4°
C2C3H26109.8°109.5°
C2C3H27109.8°109.4°
C18C13C14119.8°120.0°
C13C18C17120.0°120.0°
C13C18H7120.0°120.0°
C13C14C15120.3°120.0°
C13C14H4119.8°120.0°
C3C4C9120.1°120.0°
C3C4C5120.1°120.0°
C4C3H26109.8°109.4°
C4C3H27109.8°109.5°
C18C17C16119.9°120.0°
C18C17H6120.1°120.0°
C17C18H7120.0°120.0°
C14C15C16119.9°120.0°
C15C14H4119.8°120.0°
C14C15H5120.0°120.0°
C4C9C8119.9°120.0°
C9C4C5119.8°120.0°
C4C9H34120.0°120.0°
C9C8C7120.1°120.1°
C9C8H33120.0°119.9°
C8C9H34120.1°120.0°
C4C5CL1121.2°120.0°
C4C5C6120.2°120.0°
C8C7C6119.9°120.0°
C8C7CL2121.4°120.0°
C7C8H33120.0°120.0°
CL1C5C6118.5°120.0°
C5C6C7120.1°120.0°
C5C6H32120.0°120.0°
C17C16C15120.0°119.9°
C17C16F1120.6°120.0°
C16C17H6120.0°120.0°
C15C16F1119.4°120.0°
C16C15H5120.0°120.0°
C6C7CL2118.7°120.0°
C7C6H32119.9°120.0°
H2C12H3109.5°109.5°
H8C19H9109.5°109.5°
H11C21H12109.5°109.5°
H13C22H14109.5°109.5°
H15C23H16109.4°109.5°
H17C24H18109.4°109.5°
H17C24H19109.5°109.5°
H18C24H19109.5°109.5°
H20C25H21109.4°109.5°
H20C25H22109.4°109.4°
H21C25H22109.5°109.5°
H24C27H25109.5°109.5°
H26C3H27109.5°109.5°
H39N5H40109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C24N4C25C23121.0°124.0°
C24N4C23C22153.1°170.0°
C24N4C23H1586.4°50.0°
C24N4C23H1632.7°70.0°
N4C24H17H18120.0°120.0°
N4C24H17H19120.0°119.9°
N4C24H18H19120.0°119.9°
C24N4C25H20180.0°60.0°
C24N4C25H2160.0°180.0°
C24N4C25H2260.0°59.9°
C25N4C23C2286.2°66.0°
C25N4C23H1534.3°174.0°
C25N4C23H16153.4°54.0°
C25N4C24H17180.0°56.0°
C25N4C24H1860.0°176.0°
C25N4C24H1960.0°64.0°
N4C25H20H21120.0°120.0°
N4C25H20H22120.0°120.0°
N4C25H21H22120.0°120.0°
N4C23C22H15120.5°120.0°
N4C23C22H16120.4°120.0°
N4C23C22C2177.5°180.0°
N4C23C22H1342.9°60.0°
N4C23C22H14162.1°60.0°
N4C23H15H16118.7°120.0°
C23N4C24H1758.5°180.0°
C23N4C24H1861.5°60.0°
C23N4C24H19178.5°60.0°
C23N4C25H2059.0°64.0°
C23N4C25H21179.0°56.0°
C23N4C25H2260.9°176.1°
N6C30C29C3140.1°99.8°
N6C30C29C28140.2°80.1°
C23C22C21H13120.4°120.0°
C23C22C21H14120.4°119.9°
C23C22C21N3160.7°180.0°
C23C22C21H1179.4°60.1°
C23C22C21H1240.7°60.0°
C23C22H13H14118.8°120.0°
C22C23H15H16118.7°120.0°
C32C31C29H28180.0°180.0°
C32C31C29C30179.7°180.0°
C31C32C33H29180.0°180.0°
C32C31C29C280.7°0.0°
C31C32C33C340.0°0.0°
C31C32C33H30180.0°180.0°
C31C29C30C28179.7°180.0°
C29C31C32C330.3°0.0°
C31C29C28C340.8°0.0°
C31C29C28C27179.7°179.7°
C29C31C32H29179.7°180.0°
C30C29C28C34179.5°180.0°
C30C29C28C270.6°0.2°
C30C29C31H280.3°0.0°
C32C33C34H30180.0°180.0°
C32C33C34C280.2°0.0°
C33C32C31H28179.8°180.0°
C32C33C34H31179.8°179.7°
C29C28C34C330.6°0.0°
C29C28C34C27178.9°179.8°
C29C28C27C26132.5°85.3°
C29C28C27H24107.6°34.7°
C29C28C27H2512.7°154.8°
C28C29C31H28179.4°180.0°
C29C28C34H31179.4°179.8°
C22C21N3H11119.9°120.0°
C22C21N3H12119.9°120.0°
C22C21N3C20158.3°180.0°
C22C21H11H12120.2°120.1°
C21C22H13H14118.8°120.1°
C21C22C23H15162.1°60.0°
C21C22C23H1643.0°60.0°
C22C21N3H3721.7°0.0°
C21N3C20H37180.0°180.0°
C21N3C20O20.4°0.1°
C21N3C20C19179.9°180.0°
N3C21H11H12120.2°120.0°
N3C21C22H1340.3°60.0°
N3C21C22H1478.9°60.1°
C33C34C28H31180.0°179.7°
C33C34C28C27179.5°179.7°
C34C33C32H29179.9°180.0°
C34C28C27C2646.4°95.0°
C34C28C27H2473.5°145.0°
C34C28C27H25166.2°25.0°
C28C34C33H30179.8°180.0°
C28C27C26H24119.8°120.0°
C28C27C26H25119.9°119.9°
C28C27C26N5178.9°65.0°
C28C27C26C159.7°175.0°
C28C27C26H2358.6°55.0°
C28C27H24H25120.4°120.0°
C27C28C34H310.5°0.0°
N3C20O2C19179.5°179.9°
N3C20C19C11119.5°180.0°
N3C20C19H8120.3°60.0°
N3C20C19H90.6°60.0°
C20N3C21H1138.4°60.0°
C20N3C21H1281.8°60.0°
C27C26N5C1122.4°120.0°
C27C26N5H23119.7°120.1°
C27C26C1H23118.2°120.0°
C27C26C1O148.8°100.3°
C27C26C1N1130.6°80.0°
C26C27H24H25120.4°120.0°
C27C26N5H39180.0°64.0°
C27C26N5H4060.0°60.0°
O2C20C19C1160.9°0.0°
O2C20C19H859.3°120.0°
O2C20C19H9178.9°120.0°
O2C20N3H37179.6°180.0°
C20C19C11H8120.2°120.0°
C20C19C11H9120.2°120.0°
C20C19C11N2177.2°65.0°
C20C19C11C1263.0°175.0°
C20C19C11H156.6°55.0°
C20C19H8H9119.5°120.0°
C19C20N3H370.1°0.0°
C19C11N2C12121.8°120.0°
C19C11N2H1120.0°120.0°
C19C11C12H1119.6°120.0°
C19C11N2C1090.0°155.0°
C19C11C12C13178.2°175.0°
C19C11C12H262.4°65.0°
C19C11C12H358.7°55.0°
C11C19H8H9119.4°120.0°
C19C11N2H3690.0°25.0°
N5C26C1H23118.5°120.0°
N5C26C1O174.5°19.7°
N5C26C1N1106.1°160.0°
N5C26C27H2459.1°175.0°
N5C26C27H2561.2°54.9°
C26N5H39H40120.0°124.0°
C26C1O1N1179.4°179.7°
C26C1N1C2179.9°180.0°
C1C26C27H24179.6°55.0°
C1C26C27H2560.2°65.1°
C26C1N1H350.2°0.1°
C1C26N5H3957.5°176.0°
C1C26N5H40177.6°60.0°
O1C1N1C20.4°0.3°
O1C1C26H23167.0°139.7°
O1C1N1H35179.6°179.8°
C1N1C2H35180.0°179.9°
C1N1C2C10109.0°154.9°
C1N1C2C3131.5°85.0°
C1N1C2H1010.9°35.0°
N1C1C26H2312.4°40.0°
N2C11C12H1118.8°120.0°
C11N2C10H36180.0°180.0°
C11N2C10O30.5°0.0°
N2C11C12C1360.2°65.0°
C11N2C10C2179.4°180.0°
N2C11C12H259.3°55.1°
N2C11C12H3179.6°175.0°
N2C11C19H857.0°175.0°
N2C11C19H962.6°55.0°
C12C11N2C10148.1°85.0°
C11C12C13H2119.4°120.0°
C11C12C13H3119.5°120.0°
C11C12C13C1882.5°90.0°
C11C12C13C1496.9°89.7°
C11C12H2H3121.6°119.9°
C12C11C19H8176.9°55.0°
C12C11C19H957.2°65.0°
C12C11N2H3631.9°95.0°
N1C2C10N2135.0°180.0°
N1C2C10O345.1°0.1°
N1C2C10C3120.0°120.1°
N1C2C10H10120.5°120.0°
N1C2C3H10121.3°120.0°
N1C2C3C474.3°65.0°
N1C2C3H26166.0°175.0°
N1C2C3H2745.5°55.0°
N2C10O3C2179.9°179.9°
N2C10C2C3105.1°59.9°
C10N2C11H130.0°35.0°
N2C10C2H1014.4°60.0°
O3C10C2C374.8°120.0°
O3C10C2H10165.7°120.1°
O3C10N2H36179.5°180.0°
C12C13C18C14179.4°179.7°
C12C13C18C17179.6°179.8°
C12C13C14C15179.5°180.0°
C13C12C11H158.6°55.0°
C13C12H2H3121.6°120.0°
C12C13C14H40.5°0.0°
C12C13C18H70.4°0.0°
C10C2C3H10119.5°120.0°
C10C2C3C4166.6°175.0°
C10C2C3H2646.8°55.0°
C10C2C3H2773.6°65.0°
C10C2N1H3571.0°25.0°
C2C10N2H360.7°0.1°
C2C3C4H26119.8°120.0°
C2C3C4H27119.8°119.9°
C2C3C4C986.9°95.3°
C2C3C4C592.2°85.0°
C2C3H26H27120.7°120.0°
C3C2N1H3548.5°95.1°
C13C18C17H7180.0°179.8°
C18C13C14C150.1°0.2°
C13C18C17C160.2°0.5°
C18C13C12H2158.1°30.0°
C18C13C12H337.0°150.0°
C18C13C14H4179.9°179.8°
C13C18C17H6179.7°179.7°
C14C13C18C170.2°0.5°
C13C14C15H4180.0°180.0°
C13C14C15C160.1°0.0°
C14C13C12H222.5°150.3°
C14C13C12H3143.6°30.3°
C13C14C15H5179.9°180.0°
C14C13C18H7179.8°179.7°
C3C4C9C5179.1°179.7°
C3C4C9C8179.2°179.7°
C3C4C5CL10.5°0.0°
C3C4C5C6179.5°179.9°
C4C3C2H1047.1°55.0°
C4C3H26H27120.7°120.0°
C3C4C9H340.8°0.1°
C18C17C16H6180.0°179.7°
C18C17C16C150.2°0.3°
C18C17C16F1179.8°179.8°
C14C15C16C170.2°0.0°
C14C15C16H5180.0°180.0°
C14C15C16F1179.9°179.9°
C4C9C8H34180.0°179.6°
C4C9C8C70.1°0.6°
C9C4C5CL1179.6°179.7°
C9C4C5C60.4°0.2°
C9C4C3H26153.3°144.7°
C9C4C3H2732.9°24.7°
C4C9C8H33179.9°179.7°
C8C9C4C50.1°0.6°
C9C8C7H33180.0°179.7°
C9C8C7C60.1°0.3°
C9C8C7CL2180.0°179.7°
C4C5CL1C6180.0°180.0°
C4C5C6C70.5°0.1°
C5C4C3H2627.6°35.0°
C5C4C3H27148.1°155.0°
C4C5C6H32179.5°180.0°
C5C4C9H34179.9°179.8°
C8C7C6C50.2°0.0°
C8C7C6CL2179.9°179.9°
C8C7C6H32179.8°179.9°
C7C8C9H34179.9°179.7°
CL1C5C6C7179.6°180.0°
CL1C5C6H320.4°0.1°
C5C6C7H32180.0°179.9°
C5C6C7CL2179.7°179.9°
C17C16C15F1179.9°179.9°
C17C16C15H5179.9°180.0°
C16C17C18H7179.8°179.7°
C16C15C14H4179.9°180.0°
C15C16C17H6179.8°180.0°
C6C7C8H33179.9°180.0°
CL2C7C6H320.3°0.0°
CL2C7C8H330.0°0.1°
F1C16C15H50.1°0.0°
F1C16C17H60.2°0.0°
H1C11C12H2178.1°175.0°
H1C11C12H360.8°65.0°
H1C11C19H863.6°65.0°
H1C11C19H9176.7°175.0°
H1C11N2H36150.0°145.0°
H4C14C15H50.1°0.0°
H6C17C18H70.2°0.0°
H10C2C3H2672.7°65.0°
H10C2C3H27166.8°175.0°
H10C2N1H35169.1°145.0°
H11C21C22H13160.2°59.9°
H11C21C22H1441.0°NaN°
H11C21N3H37141.6°120.0°
H12C21C22H1379.7°180.0°
H12C21C22H14161.1°59.9°
H12C21N3H3798.3°120.0°
H13C22C23H1577.5°NaN°
H13C22C23H16163.4°60.0°
H14C22C23H1541.7°60.0°
H14C22C23H1677.4°180.0°
H17C24H18H19120.0°120.1°
H20C25H21H22120.0°120.0°
H23C26C27H2461.3°65.0°
H23C26C27H25178.5°175.0°
H23C26N5H3960.4°56.0°
H23C26N5H4059.6°180.0°
H28C31C32H290.3°0.0°
H29C32C33H300.0°0.0°
H30C33C34H310.2°0.3°
H33C8C9H340.1°0.1°

250835

PDB entries from 2026-03-18

PDB statisticsPDBj update infoContact PDBjnumon