Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

WD9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C23C22doub1.35Å1.37ÅAromatic
C23C24sing1.40Å1.38ÅAromatic
C22N21sing1.35Å1.32ÅAromatic
C14N13sing1.46Å1.46Å
C14C15sing1.51Å1.54Å
N13C9sing1.37Å1.46Å
N11C12doub1.31Å1.34ÅAromatic
N11N10sing1.40Å1.41ÅAromatic
C12C4sing1.39Å1.39ÅAromatic
C24N25doub1.31Å1.33ÅAromatic
N21C20sing1.40Å1.46Å
N21N25sing1.40Å1.37ÅAromatic
C15C20doub1.39Å1.40ÅAromatic
C15C16sing1.38Å1.39ÅAromatic
N10C9sing1.37Å1.36ÅAromatic
N10C5sing1.37Å1.29ÅAromatic
C9N8doub1.32Å1.32ÅAromatic
C20C19sing1.39Å1.39ÅAromatic
C16C17doub1.38Å1.38ÅAromatic
C4C5doub1.38Å1.41ÅAromatic
C4C2sing1.51Å1.53Å
C5N6sing1.34Å1.36ÅAromatic
N8C7sing1.34Å1.33ÅAromatic
C19C18doub1.38Å1.39ÅAromatic
C17C18sing1.38Å1.38ÅAromatic
C2C3sing1.53Å1.52Å
C2C1sing1.53Å1.53Å
N6C7doub1.32Å1.33ÅAromatic
C7O26sing1.35Å1.41Å
C32C27sing1.53Å1.52Å
C32N31sing1.47Å1.49Å
C27O26sing1.43Å1.40Å
C27C28sing1.53Å1.49Å
C28C29sing1.53Å1.48Å
N31C30sing1.47Å1.49Å
C29C30sing1.53Å1.52Å
C2H1sing1.09Å1.10Å
C3H2sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C12H5sing1.08Å1.08Å
C1H6sing1.09Å1.10Å
C1H7sing1.09Å1.10Å
C1H8sing1.09Å1.10Å
N13H9sing0.97Å1.00Å
C14H10sing1.09Å1.10Å
C14H11sing1.09Å1.10Å
C16H12sing1.08Å1.08Å
C17H13sing1.08Å1.08Å
C18H14sing1.08Å1.08Å
C19H15sing1.08Å1.08Å
C22H16sing1.08Å1.08Å
C23H17sing1.08Å1.08Å
C24H18sing1.08Å1.08Å
C27H19sing1.09Å1.10Å
C28H20sing1.09Å1.10Å
C28H21sing1.09Å1.10Å
C29H22sing1.09Å1.10Å
C29H23sing1.09Å1.10Å
C30H24sing1.09Å1.10Å
C30H25sing1.09Å1.10Å
N31H26sing1.01Å1.00Å
C32H28sing1.09Å1.10Å
C32H29sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C22C23C24107.5°107.9°
C23C22N21108.0°107.7°
C23C22H16126.0°126.1°
C22C23H17126.3°126.0°
C23C24N25107.5°108.2°
C24C23H17126.2°126.0°
C23C24H18126.3°125.8°
C22N21C20127.1°126.1°
C22N21N25108.9°107.9°
N21C22H16126.0°126.2°
N13C14C15115.2°109.5°
C14N13C9123.0°120.0°
C14N13H9106.0°120.0°
N13C14H10108.0°109.5°
N13C14H11108.0°109.5°
C14C15C20121.0°120.0°
C14C15C16119.8°120.0°
C15C14H10108.0°109.5°
C15C14H11108.0°109.4°
N13C9N10119.2°120.2°
N13C9N8120.7°120.3°
C9N13H9106.0°120.0°
C12N11N10107.4°108.8°
N11C12C4107.6°109.0°
N11C12H5126.2°125.5°
N11N10C9129.9°133.4°
N11N10C5110.1°107.6°
C12C4C5107.2°107.6°
C12C4C2126.5°126.2°
C4C12H5126.2°125.6°
C24N25N21108.0°108.2°
N25C24H18126.2°125.9°
C20N21N25123.8°126.0°
N21C20C15123.0°120.1°
N21C20C19117.5°120.0°
C20C15C16119.1°119.9°
C15C20C19119.4°119.9°
C15C16C17121.0°120.1°
C15C16H12119.5°120.0°
C9N10C5120.0°118.9°
N10C9N8120.0°119.5°
N10C5C4107.5°107.0°
N10C5N6119.9°119.4°
C9N8C7120.0°120.9°
C20C19C18120.9°119.9°
C20C19H15119.5°120.1°
C16C17C18119.7°120.1°
C17C16H12119.5°120.0°
C16C17H13120.1°119.9°
C5C4C2126.0°126.2°
C4C5N6132.5°133.6°
C4C2C3110.5°109.5°
C4C2C1112.5°109.5°
C4C2H1107.5°109.4°
C5N6C7120.2°120.0°
N8C7N6119.8°121.2°
N8C7O26120.8°119.4°
C19C18C17119.7°120.1°
C19C18H14120.2°119.9°
C18C19H15119.5°120.1°
C18C17H13120.2°119.9°
C17C18H14120.1°120.0°
C3C2C1111.1°109.5°
C3C2H1107.5°109.5°
C2C3H2109.5°109.5°
C2C3H3109.5°109.5°
C2C3H4109.5°109.4°
C1C2H1107.5°109.5°
C2C1H6109.5°109.5°
C2C1H7109.5°109.5°
C2C1H8109.5°109.5°
N6C7O26119.2°119.4°
C7O26C27110.6°117.0°
C27C32N31112.9°109.5°
C32C27O26106.6°109.5°
C32C27C28113.7°109.3°
C32C27H19108.2°109.5°
C27C32H28108.6°109.5°
C27C32H29108.6°109.5°
C32N31C30116.1°111.2°
C32N31H26107.8°111.0°
N31C32H28108.6°109.5°
N31C32H29108.6°109.5°
O26C27C28109.6°109.5°
O26C27H19109.9°109.5°
C27C28C29114.7°109.2°
C28C27H19108.7°109.5°
C27C28H20108.2°109.6°
C27C28H21108.2°109.5°
C28C29C30112.6°109.3°
C29C28H20108.2°109.5°
C29C28H21108.2°109.5°
C28C29H22108.7°109.5°
C28C29H23108.7°109.5°
N31C30C29110.7°109.5°
N31C30H24109.2°109.5°
N31C30H25109.2°109.4°
C30N31H26107.8°111.0°
C30C29H22108.7°109.5°
C30C29H23108.7°109.5°
C29C30H24109.2°109.5°
C29C30H25109.1°109.5°
H2C3H3109.5°109.5°
H2C3H4109.5°109.5°
H3C3H4109.4°109.5°
H6C1H7109.5°109.4°
H6C1H8109.5°109.5°
H7C1H8109.4°109.5°
H10C14H11109.4°109.5°
H20C28H21109.4°109.5°
H22C29H23109.5°109.5°
H24C30H25109.5°109.4°
H28C32H29109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C22C23C24H17180.0°180.0°
C23C22N21H16180.0°179.9°
C22C23C24N250.0°0.2°
C23C22N21C20177.7°180.0°
C23C22N21N253.2°0.3°
C22C23C24H18180.0°180.0°
C24C23C22N212.0°0.0°
C23C24N25H18180.0°179.8°
C23C24N25N211.9°0.4°
C24C23C22H16178.0°180.0°
C22N21N25C243.2°0.4°
C22N21C20N25173.7°179.7°
C22N21C20C1552.9°179.7°
C22N21C20C19130.1°0.6°
N21C22C23H17178.0°180.0°
N13C14C15H10120.8°120.0°
N13C14C15H11120.9°120.0°
C14N13C9H9121.9°179.9°
N13C14C15C20157.8°80.0°
N13C14C15C1621.3°99.7°
C14N13C9N10170.7°180.0°
C14N13C9N88.6°0.1°
N13C14H10H11117.4°120.0°
C15C14N13C952.8°180.0°
C14C15C20N210.8°0.0°
C14C15C20C16179.0°179.7°
C14C15C20C19177.8°179.7°
C14C15C16C17179.3°180.0°
C15C14N13H969.1°0.0°
C15C14H10H11117.4°120.0°
C14C15C16H120.7°0.0°
N13C9N10N110.4°0.4°
N13C9N10N8179.3°179.9°
N13C9N10C5179.7°180.0°
N13C9N8C7178.7°180.0°
C9N13C14H1068.0°60.0°
C9N13C14H11173.6°60.1°
N11C12C4H5180.0°179.9°
C12N11N10C9179.5°180.0°
C12N11N10C50.2°0.4°
N11C12C4C53.0°0.1°
N11C12C4C2177.5°179.7°
N10N11C12C41.8°0.3°
N11N10C9C5179.3°179.6°
N11N10C9N8179.7°179.5°
N11N10C5C42.0°0.3°
N11N10C5N6179.1°179.7°
N10N11C12H5178.2°179.8°
C12C4C5N103.1°0.2°
C12C4C5C2174.6°179.8°
C12C4C5N6179.7°179.8°
C12C4C2C3114.8°59.7°
C12C4C2C1120.4°60.3°
C12C4C2H12.3°179.8°
C24N25N21C20177.9°179.9°
N25C24C23H17180.0°179.8°
N21C20C15C19176.9°179.7°
N21C20C15C16178.2°179.7°
N21C20C19C18179.5°179.7°
N21C20C19H150.5°0.0°
C20N21C22H162.3°0.1°
N25N21C20C15120.9°0.0°
N25N21C20C1956.1°179.7°
N25N21C22H16176.8°179.8°
N21N25C24H18178.1°179.8°
C20C15C16C170.3°0.2°
C15C20C19C182.4°0.6°
C20C15C14H1036.9°40.0°
C20C15C14H1181.4°160.0°
C20C15C16H12179.7°179.7°
C15C20C19H15177.6°179.7°
C16C15C20C191.3°0.6°
C15C16C17H12180.0°180.0°
C15C16C17C180.7°0.0°
C16C15C14H10142.1°140.3°
C16C15C14H1199.6°20.3°
C15C16C17H13179.2°180.0°
C9N10C5C4178.6°180.0°
C9N10C5N61.5°0.0°
N10C9N8C72.0°0.0°
N10C9N13H948.8°0.1°
C5N10C9N81.0°0.1°
N10C5C4N6176.6°180.0°
N10C5C4C2177.7°180.0°
N10C5N6C72.9°0.1°
C9N8C7N63.5°0.0°
C9N8C7O26178.7°179.9°
N8C9N13H9130.5°180.0°
C20C19C18H15180.0°179.7°
C20C19C18C171.9°0.4°
C20C19C18H14178.1°179.8°
C16C17C18C190.4°0.0°
C16C17C18H13180.0°179.9°
C16C17C18H14179.6°179.9°
C5C4C2C358.8°120.0°
C5C4C2C166.0°120.0°
C4C5N6C7179.2°180.0°
C5C4C2H1175.8°0.0°
C5C4C12H5177.0°180.0°
C2C4C5N65.7°0.0°
C4C2C3C1125.6°120.0°
C4C2C3H1117.0°120.0°
C4C2C1H1118.2°119.9°
C4C2C3H2180.0°60.0°
C4C2C3H360.0°60.0°
C4C2C3H460.0°180.0°
C2C4C12H52.5°0.2°
C4C2C1H6180.0°180.0°
C4C2C1H760.0°60.0°
C4C2C1H860.0°60.0°
C5N6C7N83.9°0.1°
C5N6C7O26179.2°180.0°
N8C7N6O26175.3°179.9°
N8C7O26C275.1°179.9°
C19C18C17H14180.0°179.9°
C19C18C17H13179.7°179.9°
C18C17C16H12179.3°180.0°
C17C18C19H15178.0°180.0°
C3C2C1H1117.4°120.1°
C2C3H2H3120.0°120.0°
C2C3H2H4120.0°120.0°
C2C3H3H4120.0°120.0°
C3C2C1H655.6°60.0°
C3C2C1H764.5°180.0°
C3C2C1H8175.6°60.0°
C1C2C3H254.4°60.0°
C1C2C3H3174.4°180.0°
C1C2C3H465.6°60.0°
C2C1H6H7120.0°120.0°
C2C1H6H8120.0°120.0°
C2C1H7H8120.0°120.1°
N6C7O26C27170.1°0.1°
C7O26C27C32113.9°90.2°
C7O26C27C28122.6°150.0°
C7O26C27H193.2°29.9°
C27C32N31H28120.5°120.0°
C27C32N31H29120.5°120.0°
C32C27O26C28123.5°119.8°
C32C27O26H19117.1°120.1°
C32C27C28H19120.6°120.0°
C32C27C28C2925.5°57.6°
C27C32N31C3021.3°61.7°
C32C27C28H2095.3°177.6°
C32C27C28H21146.3°62.2°
C27C32N31H2699.6°174.1°
C27C32H28H29118.4°120.0°
N31C32C27O2668.6°179.1°
N31C32C27C2852.4°59.2°
C32N31C30H26120.9°124.1°
C32N31C30C2932.3°61.7°
N31C32C27H19173.3°60.8°
C32N31C30H2487.9°178.2°
C32N31C30H25152.4°58.3°
N31C32H28H29118.4°120.0°
O26C27C28H19120.1°120.0°
O26C27C28C2993.7°177.6°
O26C27C28H20145.5°62.5°
O26C27C28H2127.1°57.7°
O26C27C32H2852.0°59.1°
O26C27C32H29170.9°60.9°
C27C28C29H20120.8°119.9°
C27C28C29H21120.8°119.9°
C27C28C29C3029.2°57.6°
C27C28H20H21117.6°120.2°
C27C28C29H2291.3°62.3°
C27C28C29H23149.6°177.6°
C28C27C32H28172.9°60.9°
C28C27C32H2968.1°179.2°
C28C29C30N3159.6°59.1°
C28C29C30H22120.5°119.9°
C28C29C30H23120.5°120.0°
C29C28C27H19146.2°62.4°
C29C28H20H21117.6°120.1°
C28C29H22H23118.6°120.1°
C28C29C30H2460.6°179.2°
C28C29C30H25179.8°60.8°
N31C30C29H24120.2°120.1°
N31C30C29H25120.2°120.0°
N31C30C29H2260.9°60.8°
N31C30C29H23179.9°179.1°
N31C30H24H25119.4°120.0°
C30N31C32H28141.8°58.3°
C30N31C32H2999.2°178.3°
C30C29C28H20150.0°177.6°
C30C29C28H2191.6°62.3°
C30C29H22H23118.5°120.1°
C29C30H24H25119.4°120.0°
C29C30N31H26153.2°174.1°
H1C2C3H262.9°180.0°
H1C2C3H357.1°60.0°
H1C2C3H4177.0°60.0°
H1C2C1H661.8°60.0°
H1C2C1H7178.1°59.9°
H1C2C1H858.2°179.9°
H2C3H3H4120.0°120.0°
H6C1H7H8120.0°120.0°
H9N13C14H10170.1°120.0°
H9N13C14H1151.8°120.0°
H12C16C17H130.8°0.1°
H13C17C18H140.3°0.0°
H14C18C19H152.0°0.1°
H16C22C23H172.0°0.1°
H17C23C24H180.0°0.1°
H19C27C28H2025.4°57.6°
H19C27C28H2193.0°177.8°
H19C27C32H2866.2°179.2°
H19C27C32H2952.8°59.2°
H20C28C29H2229.5°57.6°
H20C28C29H2389.6°62.4°
H21C28C29H22147.9°177.8°
H21C28C29H2328.9°57.7°
H22C29C30H24178.9°59.3°
H22C29C30H2559.3°179.2°
H23C29C30H2459.9°60.8°
H23C29C30H2559.7°59.1°
H24C30N31H2633.0°54.1°
H25C30N31H2686.6°65.9°
H26N31C32H2820.9°65.8°
H26N31C32H29139.8°54.1°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon