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WD1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6C5sing1.53Å1.53Å
C6C7sing1.53Å1.52Å
C3N1sing1.47Å1.49Å
C3C4sing1.53Å1.52Å
C5C4sing1.53Å1.52Å
N1C2sing1.47Å1.49Å
C7C8sing1.53Å1.52Å
C2C1sing1.53Å1.52Å
C4C9sing1.53Å1.53Å
C9C8sing1.53Å1.51Å
C8F1sing1.40Å1.41Å
C1O1sing1.43Å1.42Å
C1O2sing1.43Å1.43Å
O1H1sing0.97Å0.95Å
O2H2sing0.97Å0.95Å
C2H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
N1H5sing1.01Å1.00Å
C3H7sing1.09Å1.10Å
C3H8sing1.09Å1.10Å
C4H9sing1.09Å1.10Å
C5H10sing1.09Å1.10Å
C5H11sing1.09Å1.10Å
C6H12sing1.09Å1.10Å
C6H13sing1.09Å1.10Å
C7H14sing1.09Å1.10Å
C7H15sing1.09Å1.10Å
C8H16sing1.09Å1.10Å
C9H17sing1.09Å1.10Å
C9H18sing1.09Å1.10Å
C1H19sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C6C7112.5°109.5°
C6C5C4112.3°109.5°
C6C5H10108.7°109.5°
C6C5H11108.8°109.5°
C5C6H12108.7°109.4°
C5C6H13108.7°109.5°
C6C7C8111.8°109.5°
C7C6H12108.7°109.5°
C7C6H13108.7°109.5°
C6C7H14108.9°109.5°
C6C7H15108.9°109.4°
N1C3C4113.5°109.5°
C3N1C2113.0°111.0°
C3N1H5108.6°111.0°
N1C3H7108.5°109.5°
N1C3H8108.4°109.5°
C3C4C5112.3°109.5°
C3C4C9111.3°109.5°
C4C3H7108.4°109.5°
C4C3H8108.5°109.5°
C3C4H9107.4°109.5°
C5C4C9110.8°109.4°
C5C4H9107.4°109.5°
C4C5H10108.8°109.5°
C4C5H11108.7°109.5°
N1C2C1113.9°109.5°
N1C2H3108.3°109.5°
N1C2H4108.4°109.5°
C2N1H5108.6°111.0°
C7C8C9110.5°109.5°
C7C8F1108.6°109.5°
C8C7H14108.9°109.5°
C8C7H15108.9°109.5°
C7C8H16109.0°109.5°
C2C1O1109.1°109.5°
C2C1O2105.8°109.4°
C1C2H3108.4°109.5°
C1C2H4108.4°109.5°
C2C1H19109.1°109.4°
C4C9C8111.9°109.5°
C9C4H9107.3°109.5°
C4C9H17108.8°109.5°
C4C9H18108.9°109.5°
C9C8F1109.3°109.5°
C9C8H16109.0°109.4°
C8C9H17108.9°109.5°
C8C9H18108.9°109.5°
F1C8H16110.4°109.5°
O1C1O2112.0°109.5°
C1O1H1109.5°114.0°
O1C1H19110.4°109.5°
C1O2H2109.5°114.0°
O2C1H19110.4°109.5°
H3C2H4109.5°109.4°
H7C3H8109.5°109.5°
H10C5H11109.4°109.4°
H12C6H13109.5°109.4°
H14C7H15109.4°109.5°
H17C9H18109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C6C7H12120.5°120.0°
C5C6C7H13120.5°120.1°
C6C5C4C3101.1°180.0°
C6C5C4H10120.4°120.0°
C6C5C4H11120.5°120.0°
C5C6C7C831.2°60.0°
C6C5C4C924.1°59.9°
C6C5C4H9141.1°60.0°
C6C5H10H11118.7°120.0°
C5C6H12H13118.6°120.0°
C5C6C7H1489.2°180.0°
C5C6C7H15151.5°60.0°
C7C6C5C460.7°60.0°
C6C7C8H14120.4°120.0°
C6C7C8H15120.4°120.0°
C6C7C8C928.9°60.0°
C6C7C8F190.9°60.0°
C7C6C5H10178.8°180.0°
C7C6C5H1159.7°60.0°
C7C6H12H13118.6°120.0°
C6C7H14H15118.9°120.0°
C6C7C8H16148.7°180.0°
N1C3C4H7120.6°120.0°
N1C3C4H8120.6°120.0°
N1C3C4C5157.0°65.0°
C3N1C2H5120.5°124.0°
C3N1C2C1140.9°180.0°
N1C3C4C978.1°175.0°
C3N1C2H398.5°60.0°
C3N1C2H420.2°59.9°
N1C3H7H8118.1°120.0°
N1C3C4H939.1°55.0°
C3C4C5C9125.2°120.0°
C3C4C5H9117.9°120.0°
C4C3N1C2103.6°180.0°
C3C4C9H9117.2°120.0°
C3C4C9C8162.4°180.0°
C4C3N1H517.0°56.1°
C4C3H7H8118.2°120.0°
C3C4C5H1019.4°60.0°
C3C4C5H11138.5°60.0°
C3C4C9H1742.1°60.0°
C3C4C9H1877.2°60.0°
C5C4C9H9117.0°120.0°
C5C4C9C836.7°60.0°
C5C4C3H736.3°55.0°
C5C4C3H882.4°175.0°
C4C5H10H11118.7°120.0°
C4C5C6H12178.8°60.0°
C4C5C6H1359.7°180.0°
C5C4C9H1783.7°60.0°
C5C4C9H18157.1°180.0°
N1C2C1H3120.6°120.0°
N1C2C1H4120.6°120.0°
N1C2C1O125.5°60.0°
N1C2C1O295.1°60.0°
N1C2H3H4118.0°120.0°
C2N1C3H717.0°60.0°
C2N1C3H8135.8°60.0°
N1C2C1H19146.2°180.0°
C7C8C9C466.3°60.0°
C7C8C9F1119.5°120.0°
C7C8C9H16119.7°120.0°
C7C8F1H16119.5°120.1°
C8C7C6H12151.6°60.0°
C8C7C6H1389.3°180.0°
C8C7H14H15118.9°120.0°
C7C8C9H1754.1°60.0°
C7C8C9H18173.3°180.0°
C2C1O1O2116.7°120.0°
C2C1O1H19119.9°120.0°
C2C1O2H19117.8°120.0°
C2C1O1H1180.0°60.0°
C2C1O2H2180.0°180.0°
C1C2H3H4118.0°120.0°
C1C2N1H520.3°56.0°
C4C9C8H17120.4°120.0°
C4C9C8H18120.4°120.0°
C4C9C8F153.2°60.0°
C9C4C3H7161.2°65.0°
C9C4C3H842.5°55.0°
C9C4C5H10144.5°180.0°
C9C4C5H1196.4°60.0°
C4C9C8H16174.0°180.0°
C4C9H17H18118.9°120.0°
C9C8F1H16119.9°120.0°
C8C9C4H980.3°60.0°
C9C8C7H14149.3°180.0°
C9C8C7H1591.4°60.0°
C8C9H17H18118.9°120.0°
F1C8C7H1429.4°60.0°
F1C8C7H15148.7°180.0°
F1C8C9H17173.6°180.0°
F1C8C9H1867.2°60.0°
O1C1O2H19123.5°120.0°
O1C1O2H261.3°60.0°
O1C1C2H395.1°60.0°
O1C1C2H4146.2°180.0°
O2C1O1H163.3°60.0°
O2C1C2H3144.3°180.0°
O2C1C2H425.6°60.0°
H1O1C1H1960.2°179.9°
H2O2C1H1962.2°60.0°
H3C2N1H5141.0°64.0°
H3C2C1H1925.6°60.0°
H4C2N1H5100.3°176.1°
H4C2C1H1993.1°60.0°
H5N1C3H7137.6°63.9°
H5N1C3H8103.6°176.1°
H7C3C4H981.6°175.0°
H8C3C4H9159.7°65.0°
H9C4C5H1098.5°60.0°
H9C4C5H1120.6°180.0°
H9C4C9H17159.3°180.0°
H9C4C9H1840.0°60.0°
H10C5C6H1258.4°60.0°
H10C5C6H1360.7°59.9°
H11C5C6H1260.7°180.0°
H11C5C6H13179.8°60.0°
H12C6C7H1431.3°60.0°
H12C6C7H1588.0°180.0°
H13C6C7H14150.3°60.0°
H13C6C7H1531.1°60.0°
H14C7C8H1690.9°60.0°
H15C7C8H1628.3°60.0°
H16C8C9H1765.7°60.0°
H16C8C9H1853.6°60.0°

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PDB entries from 2024-07-17

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