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WAQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C6doub1.33Å1.34ÅAromatic
N1C2sing1.32Å1.39ÅAromatic
C2N3doub1.32Å1.39ÅAromatic
C2H2sing1.08Å1.08Å
N3C4sing1.33Å1.35ÅAromatic
C5C4doub1.41Å1.34ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C6C5sing1.41Å1.35ÅAromatic
C5N7sing1.35Å1.34ÅAromatic
N6C6sing1.38Å1.33Å
N6HN6sing0.97Å1.00Å
N6HN6Asing0.97Å1.00Å
N7C8doub1.30Å1.32ÅAromatic
C8N9sing1.36Å1.35ÅAromatic
C8H8sing1.08Å1.08Å
N9C1'sing1.46Å1.47Å
C2'C1'sing1.55Å1.51Å
C1'O4'sing1.44Å1.43Å
C1'H1'sing1.09Å1.10Å
C2'O2'sing1.43Å1.40Å
C2'C3'sing1.54Å1.53Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'O3'sing1.43Å1.42Å
C3'C4'sing1.55Å1.49Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
O4'C4'sing1.44Å1.46Å
C4'C5'sing1.53Å1.52Å
C4'H4'sing1.09Å1.10Å
O5'C5'sing1.43Å1.37Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
O5'PBGsing1.61Å1.63Å
CAWOABsing1.34Å1.27Å
OABHOABsing0.97Å0.95Å
OACCAXdoub1.21Å1.25Å
OADPBGdoub1.48Å1.50Å
OAECAWdoub1.21Å1.28Å
PBGOAHsing1.61Å1.63Å
OAHHOAHsing0.97Å0.95Å
CAMCAKsing1.53Å1.52Å
CAKCALsing1.53Å1.56Å
CAKHAKsing1.09Å1.10Å
CAKHAKAsing1.09Å1.10Å
CANCALsing1.53Å1.51Å
CALHALsing1.09Å1.10Å
CALHALAsing1.09Å1.10Å
CAOCAMsing1.53Å1.52Å
CAMHAMsing1.09Å1.10Å
CAMHAMAsing1.09Å1.10Å
CANCAWsing1.51Å1.53Å
CANHANsing1.09Å1.10Å
CANHANAsing1.09Å1.10Å
CAXCAOsing1.51Å1.56Å
CAOHAOsing1.09Å1.10Å
CAOHAOAsing1.09Å1.10Å
PBGOAUsing1.61Å1.60Å
OAUCAXsing1.34Å1.37Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6N1C2118.8°121.2°
N1C6C5121.8°118.5°
N1C6N6120.7°120.8°
N1C2N3119.5°122.5°
N1C2H2120.3°118.8°
N3C2H2120.2°118.8°
C2N3C4118.4°120.7°
N3C4C5121.6°119.1°
N3C4N9131.0°134.9°
C5C4N9107.4°106.0°
C4C5C6119.9°118.2°
C4C5N7108.0°107.1°
C4N9C8108.6°107.5°
C4N9C1'123.0°126.3°
C6C5N7132.1°134.7°
C5C6N6117.5°120.7°
C5N7C8108.6°109.5°
C6N6HN6109.5°120.0°
C6N6HN6A109.5°120.0°
HN6N6HN6A109.5°120.0°
N7C8N9107.4°109.9°
N7C8H8126.3°125.1°
N9C8H8126.3°125.0°
C8N9C1'128.3°126.2°
N9C1'C2'107.4°110.4°
N9C1'O4'115.5°110.4°
N9C1'H1'109.5°110.4°
C2'C1'O4'105.2°104.8°
C2'C1'H1'108.9°110.5°
C1'C2'O2'110.4°110.5°
C1'C2'C3'102.2°104.0°
C1'C2'H2'111.4°110.5°
O4'C1'H1'110.0°110.4°
C1'O4'C4'108.9°105.3°
O2'C2'C3'108.1°110.5°
O2'C2'H2'113.1°110.5°
C2'O2'HO2'109.5°113.9°
C3'C2'H2'111.1°110.6°
C2'C3'O3'111.3°110.5°
C2'C3'C4'99.4°104.1°
C2'C3'H3'110.7°110.5°
O3'C3'C4'111.4°110.4°
O3'C3'H3'112.2°110.4°
C3'O3'HO3'109.5°114.0°
C4'C3'H3'111.2°110.6°
C3'C4'O4'104.3°104.7°
C3'C4'C5'110.0°110.4°
C3'C4'H4'111.7°110.4°
O4'C4'C5'107.0°110.3°
O4'C4'H4'112.3°110.5°
C5'C4'H4'111.2°110.4°
C4'C5'O5'105.9°109.5°
C4'C5'H5'110.3°109.4°
C4'C5'H5'A110.4°109.5°
O5'C5'H5'110.3°109.5°
O5'C5'H5'A110.4°109.5°
C5'O5'PBG119.9°123.0°
H5'C5'H5'A109.5°109.5°
O5'PBGOAD110.0°109.5°
O5'PBGOAH105.1°109.5°
O5'PBGOAU105.0°109.5°
CAWOABHOAB109.5°117.0°
OABCAWOAE126.7°120.0°
OABCAWCAN115.4°120.0°
OACCAXCAO123.7°120.0°
OACCAXOAU125.2°120.0°
OADPBGOAH114.2°109.5°
OADPBGOAU114.3°109.5°
OAECAWCAN117.9°120.0°
PBGOAHHOAH109.5°114.0°
OAHPBGOAU107.3°109.4°
CAMCAKCAL111.2°109.5°
CAMCAKHAK109.0°109.5°
CAMCAKHAKA109.0°109.5°
CAKCAMCAO110.7°109.5°
CAKCAMHAM109.2°109.5°
CAKCAMHAMA109.2°109.5°
CALCAKHAK109.0°109.4°
CALCAKHAKA109.0°109.5°
CAKCALCAN110.8°109.5°
CAKCALHAL109.1°109.4°
CAKCALHALA109.1°109.4°
HAKCAKHAKA109.5°109.5°
CANCALHAL109.1°109.5°
CANCALHALA109.1°109.5°
CALCANCAW104.5°109.5°
CALCANHAN110.7°109.5°
CALCANHANA110.7°109.5°
HALCALHALA109.5°109.5°
CAOCAMHAM109.1°109.4°
CAOCAMHAMA109.2°109.4°
CAMCAOCAX111.4°109.5°
CAMCAOHAO109.0°109.4°
CAMCAOHAOA109.0°109.5°
HAMCAMHAMA109.5°109.5°
CAWCANHAN110.7°109.4°
CAWCANHANA110.7°109.4°
HANCANHANA109.5°109.5°
CAXCAOHAO109.0°109.5°
CAXCAOHAOA109.0°109.5°
CAOCAXOAU111.0°120.0°
HAOCAOHAOA109.5°109.5°
PBGOAUCAX126.8°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6N1C2N31.0°0.1°
C6N1C2H2179.0°180.0°
N1C6C5C41.5°0.0°
N1C6C5N6179.8°180.0°
N1C6C5N7178.8°180.0°
N1C6N6HN60.0°0.1°
N1C6N6HN6A120.0°180.0°
N1C2N3H2180.0°180.0°
N1C2N3C41.8°0.1°
C2N1C6C50.9°0.0°
C2N1C6N6179.3°180.0°
C2N3C4C52.4°0.0°
C2N3C4N9179.8°180.0°
H2C2N3C4178.2°180.0°
N3C4C5N9177.9°180.0°
N3C4C5C62.3°0.0°
N3C4C5N7177.9°180.0°
N3C4N9C8178.3°180.0°
N3C4N9C1'4.8°0.0°
C4C5C6N7179.7°180.0°
C4C5C6N6178.7°180.0°
C4C5N7C80.6°0.0°
C5C4N9C80.6°0.0°
C5C4N9C1'177.6°180.0°
N9C4C5C6179.8°180.0°
N9C4C5N70.0°0.0°
C4N9C8N71.0°0.0°
C4N9C8C1'176.7°180.0°
C4N9C8H8179.0°180.0°
C4N9C1'C2'105.7°88.2°
C4N9C1'O4'137.3°156.5°
C4N9C1'H1'12.5°34.2°
C5C6N6HN6179.8°180.0°
C5C6N6HN6A59.8°0.0°
C6C5N7C8179.1°180.0°
N7C5C6N61.0°0.0°
C5N7C8N91.0°0.0°
C5N7C8H8179.0°180.0°
C6N6HN6HN6A120.0°180.0°
N7C8N9H8180.0°180.0°
N7C8N9C1'177.8°180.0°
C8N9C1'C2'70.7°91.8°
C8N9C1'O4'46.4°23.5°
C8N9C1'H1'171.2°145.8°
H8C8N9C1'2.2°0.1°
N9C1'C2'O4'123.6°118.8°
N9C1'C2'H1'118.5°122.3°
N9C1'O4'H1'124.6°122.3°
N9C1'C2'O2'152.1°98.6°
N9C1'C2'C3'93.1°142.8°
N9C1'C2'H2'25.5°24.0°
N9C1'O4'C4'113.0°159.3°
C2'C1'O4'H1'117.2°118.9°
C1'C2'O2'C3'111.0°114.6°
C1'C2'O2'H2'125.6°122.6°
C1'C2'C3'H2'118.9°118.7°
C1'C2'O2'HO2'180.0°180.0°
C1'C2'C3'O3'160.5°118.6°
C1'C2'C3'C4'43.1°0.0°
C1'C2'C3'H3'73.9°118.8°
C2'C1'O4'C4'5.2°40.6°
O4'C1'C2'O2'84.4°142.6°
O4'C1'C2'C3'30.4°24.0°
O4'C1'C2'H2'149.1°94.8°
C1'O4'C4'C3'22.9°40.6°
C1'O4'C4'C5'139.5°159.3°
C1'O4'C4'H4'98.2°78.3°
H1'C1'C2'O2'33.6°23.7°
H1'C1'C2'C3'148.3°94.9°
H1'C1'C2'H2'93.0°146.3°
H1'C1'O4'C4'122.4°78.4°
O2'C2'C3'H2'124.7°122.8°
O2'C2'C3'O3'44.1°0.0°
O2'C2'C3'C4'73.4°118.6°
O2'C2'C3'H3'169.6°122.6°
C3'C2'O2'HO2'69.0°65.4°
C2'C3'O3'C4'109.9°114.7°
C2'C3'O3'H3'124.7°122.6°
C2'C3'C4'H3'116.6°118.8°
C2'C3'O3'HO3'180.0°61.4°
C2'C3'C4'O4'40.4°24.0°
C2'C3'C4'C5'154.8°142.8°
C2'C3'C4'H4'81.1°94.9°
H2'C2'O2'HO2'54.4°57.4°
H2'C2'C3'O3'80.5°122.7°
H2'C2'C3'C4'162.0°118.7°
H2'C2'C3'H3'45.0°0.1°
O3'C3'C4'H3'126.0°122.6°
O3'C3'C4'O4'157.7°142.7°
O3'C3'C4'C5'87.8°98.6°
O3'C3'C4'H4'36.2°23.7°
C4'C3'O3'HO3'70.1°176.1°
C3'C4'O4'C5'116.6°118.8°
C3'C4'O4'H4'121.2°118.9°
C3'C4'C5'H4'124.4°122.3°
C3'C4'C5'O5'38.2°175.0°
C3'C4'C5'H5'157.6°55.1°
C3'C4'C5'H5'A81.2°64.9°
H3'C3'O3'HO3'55.4°61.2°
H3'C3'C4'O4'76.2°94.7°
H3'C3'C4'C5'38.2°24.0°
H3'C3'C4'H4'162.3°146.3°
O4'C4'C5'H4'122.9°122.4°
O4'C4'C5'O5'74.5°69.7°
O4'C4'C5'H5'44.9°170.4°
O4'C4'C5'H5'A166.0°50.4°
C4'C5'O5'H5'119.4°119.9°
C4'C5'O5'H5'A119.5°120.0°
C4'C5'H5'H5'A121.6°120.0°
C4'C5'O5'PBG179.0°180.0°
H4'C4'C5'O5'162.6°52.7°
H4'C4'C5'H5'78.0°67.3°
H4'C4'C5'H5'A43.1°172.7°
O5'C5'H5'H5'A121.6°120.0°
C5'O5'PBGOAD170.2°55.0°
C5'O5'PBGOAH66.4°65.0°
C5'O5'PBGOAU46.7°175.0°
H5'C5'O5'PBG59.6°60.1°
H5'AC5'O5'PBG61.5°60.0°
O5'PBGOADOAH117.9°120.0°
O5'PBGOADOAU117.9°120.0°
O5'PBGOAHOAU111.5°120.0°
O5'PBGOAHHOAH120.7°60.0°
O5'PBGOAUCAX176.9°175.0°
OABCAWOAECAN176.8°179.9°
OABCAWCANCAL78.6°179.9°
OABCAWCANHAN40.6°59.9°
OABCAWCANHANA162.2°60.1°
HOABOABCAWOAE0.0°0.1°
HOABOABCAWCAN176.9°180.0°
OACCAXCAOCAM9.4°0.1°
OACCAXCAOOAU175.8°179.9°
OACCAXCAOHAO110.9°120.0°
OACCAXCAOHAOA129.7°120.0°
OACCAXOAUPBG7.4°0.0°
OADPBGOAHOAU127.8°120.0°
OADPBGOAHHOAH0.0°180.0°
OADPBGOAUCAX56.2°55.0°
OAECAWCANCAL104.3°0.0°
OAECAWCANHAN136.6°120.0°
OAECAWCANHANA14.9°120.0°
OAHPBGOAUCAX71.6°65.0°
HOAHOAHPBGOAU127.8°60.0°
CAMCAKCALHAK120.2°120.0°
CAMCAKCALHAKA120.3°120.0°
CAMCAKHAKHAKA119.2°120.0°
CAMCAKCALCAN71.7°180.0°
CAMCAKCALHAL168.1°60.0°
CAMCAKCALHALA48.5°60.0°
CAKCAMCAOHAM120.2°120.0°
CAKCAMCAOHAMA120.2°120.0°
CAKCAMHAMHAMA119.4°120.0°
CAKCAMCAOCAX162.3°180.0°
CAKCAMCAOHAO77.4°60.0°
CAKCAMCAOHAOA42.0°60.0°
CALCAKHAKHAKA119.2°120.0°
CAKCALCANHAL120.2°120.0°
CAKCALCANHALA120.2°120.0°
CAKCALHALHALA119.4°120.0°
CALCAKCAMCAO166.2°180.0°
CALCAKCAMHAM73.6°60.0°
CALCAKCAMHAMA46.0°60.0°
CAKCALCANCAW166.0°180.0°
CAKCALCANHAN74.8°60.0°
CAKCALCANHANA46.8°60.0°
HAKCAKCALCAN48.6°60.0°
HAKCAKCALHAL71.6°60.0°
HAKCAKCALHALA168.8°180.0°
HAKCAKCAMCAO73.5°60.0°
HAKCAKCAMHAM46.7°180.0°
HAKCAKCAMHAMA166.3°60.0°
HAKACAKCALCAN168.1°60.0°
HAKACAKCALHAL47.9°180.0°
HAKACAKCALHALA71.7°60.0°
HAKACAKCAMCAO46.0°60.0°
HAKACAKCAMHAM166.2°60.0°
HAKACAKCAMHAMA74.2°180.0°
CANCALHALHALA119.4°120.1°
CALCANCAWHAN119.2°120.0°
CALCANCAWHANA119.2°120.0°
CALCANHANHANA122.3°120.1°
HALCALCANCAW45.8°60.0°
HALCALCANHAN165.0°180.0°
HALCALCANHANA73.4°59.9°
HALACALCANCAW73.8°60.0°
HALACALCANHAN45.4°59.9°
HALACALCANHANA167.0°180.0°
CAOCAMHAMHAMA119.4°120.0°
CAMCAOCAXHAO120.3°120.0°
CAMCAOCAXHAOA120.3°120.0°
CAMCAOHAOHAOA119.1°120.0°
CAMCAOCAXOAU174.8°180.0°
HAMCAMCAOCAX42.1°60.0°
HAMCAMCAOHAO162.4°180.0°
HAMCAMCAOHAOA78.2°60.0°
HAMACAMCAOCAX77.5°60.0°
HAMACAMCAOHAO42.8°60.0°
HAMACAMCAOHAOA162.2°180.0°
CAWCANHANHANA122.3°120.0°
CAXCAOHAOHAOA119.1°120.0°
CAOCAXOAUPBG176.9°180.0°
HAOCAOCAXOAU64.9°60.0°
HAOACAOCAXOAU54.5°60.0°

221716

PDB entries from 2024-06-26

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