Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

W8S

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C31C32sing1.38Å1.39ÅAromatic
C31C30doub1.38Å1.39ÅAromatic
C32C33doub1.38Å1.39ÅAromatic
C30C28sing1.38Å1.41ÅAromatic
C33C27sing1.38Å1.41ÅAromatic
C28C27doub1.38Å1.37ÅAromatic
C28C29sing1.51Å1.54Å
C27C26sing1.51Å1.54Å
C29N25sing1.47Å1.46Å
C26N25sing1.47Å1.46Å
N25C23sing1.35Å1.44Å
C12N11sing1.46Å1.45Å
C23O24doub1.22Å1.18Å
C23C22sing1.47Å1.53Å
O21C20sing1.36Å1.39Å
C22C20doub1.40Å1.38ÅAromatic
C22C15sing1.41Å1.40ÅAromatic
N11C13sing1.36Å1.33ÅAromatic
N11N10sing1.40Å1.37ÅAromatic
C20C19sing1.38Å1.38ÅAromatic
N14C15sing1.39Å1.45Å
N14C13sing1.39Å1.46Å
C15C16doub1.38Å1.39ÅAromatic
C13C34doub1.36Å1.38ÅAromatic
N10C09doub1.32Å1.33ÅAromatic
C19C17doub1.39Å1.39ÅAromatic
C16C17sing1.39Å1.39ÅAromatic
C17O18sing1.36Å1.39Å
C01O02sing1.43Å1.40Å
C34C09sing1.41Å1.40ÅAromatic
C09C05sing1.48Å1.52Å
C04C05doub1.39Å1.39ÅAromatic
C04C03sing1.39Å1.38ÅAromatic
C05C06sing1.39Å1.38ÅAromatic
O02C03sing1.36Å1.40Å
C03C08doub1.39Å1.39ÅAromatic
C06C07doub1.38Å1.39ÅAromatic
C08C07sing1.38Å1.39ÅAromatic
C12H1sing1.09Å1.10Å
C12H2sing1.09Å1.10Å
C12H3sing1.09Å1.10Å
C01H4sing1.09Å1.10Å
C01H5sing1.09Å1.10Å
C01H6sing1.09Å1.10Å
C04H7sing1.08Å1.08Å
C06H8sing1.08Å1.08Å
C07H9sing1.08Å1.08Å
C08H10sing1.08Å1.08Å
C16H11sing1.08Å1.08Å
C19H12sing1.08Å1.08Å
C26H13sing1.09Å1.10Å
C29H14sing1.09Å1.10Å
C30H15sing1.08Å1.08Å
C31H16sing1.08Å1.08Å
C32H17sing1.08Å1.08Å
C33H18sing1.08Å1.08Å
C34H19sing1.08Å1.08Å
N14H20sing0.97Å1.00Å
O18H21sing0.97Å0.95Å
O21H22sing0.97Å0.95Å
C26H23sing1.09Å1.10Å
C29H24sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C32C31C30120.1°120.0°
C31C32C33120.5°119.9°
C32C31H16119.9°120.0°
C31C32H17119.7°120.1°
C31C30C28119.8°120.1°
C31C30H15120.1°120.0°
C30C31H16120.0°120.0°
C32C33C27119.0°120.1°
C33C32H17119.8°120.0°
C32C33H18120.5°119.9°
C30C28C27119.8°119.9°
C30C28C29130.6°131.2°
C28C30H15120.1°119.9°
C33C27C28120.7°119.9°
C33C27C26130.3°131.2°
C27C33H18120.5°120.0°
C27C28C29109.5°108.9°
C28C27C26109.0°108.8°
C28C29N25105.1°107.7°
C28C29H14110.5°109.8°
C28C29H24110.6°109.8°
C27C26N25105.6°107.7°
C27C26H13110.4°109.8°
C27C26H23110.4°109.9°
C29N25C26109.7°106.9°
C29N25C23125.1°126.5°
N25C29H14110.6°109.8°
N25C29H24110.5°109.8°
C26N25C23125.2°126.6°
N25C26H13110.4°109.8°
N25C26H23110.4°109.8°
N25C23O24119.6°120.0°
N25C23C22120.7°120.0°
C12N11C13127.8°126.0°
C12N11N10121.9°125.9°
N11C12H1109.5°109.5°
N11C12H2109.5°109.5°
N11C12H3109.5°109.5°
O24C23C22119.7°120.0°
C23C22C20119.0°120.2°
C23C22C15119.8°120.3°
O21C20C22120.3°120.1°
O21C20C19121.1°120.1°
C20O21H22109.5°114.0°
C20C22C15121.2°119.6°
C22C20C19118.6°119.8°
C22C15N14119.2°120.1°
C22C15C16120.1°119.8°
C13N11N10110.3°108.0°
N11C13N14127.1°126.1°
N11C13C34107.4°107.7°
N11N10C09107.4°108.3°
C20C19C17120.9°120.2°
C20C19H12119.6°119.9°
C15N14C13121.5°120.0°
N14C15C16120.7°120.1°
C15N14H20119.2°120.0°
N14C13C34125.5°126.2°
C13N14H20119.3°120.1°
C15C16C17118.4°120.2°
C15C16H11120.8°119.9°
C13C34C09106.5°107.7°
C13C34H19126.8°126.1°
N10C09C34108.5°108.2°
N10C09C05122.1°125.9°
C19C17C16120.8°120.4°
C19C17O18117.1°119.8°
C17C19H12119.5°119.9°
C16C17O18122.1°119.8°
C17C16H11120.8°119.9°
C17O18H21109.5°114.0°
C01O02C03114.9°116.9°
O02C01H4109.5°109.4°
O02C01H5109.5°109.5°
O02C01H6109.4°109.4°
C34C09C05129.4°125.9°
C09C34H19126.8°126.1°
C09C05C04117.5°120.1°
C09C05C06121.3°120.1°
C05C04C03120.1°119.8°
C04C05C06121.2°119.8°
C05C04H7119.9°120.1°
C04C03O02120.3°119.9°
C04C03C08119.3°120.0°
C03C04H7120.0°120.1°
C05C06C07118.5°120.0°
C05C06H8120.7°120.0°
O02C03C08120.4°120.0°
C03C08C07120.4°120.2°
C03C08H10119.8°119.9°
C06C07C08120.6°120.2°
C07C06H8120.8°120.0°
C06C07H9119.7°119.9°
C08C07H9119.7°119.9°
C07C08H10119.9°119.9°
H1C12H2109.4°109.5°
H1C12H3109.5°109.4°
H2C12H3109.5°109.5°
H4C01H5109.4°109.5°
H4C01H6109.5°109.4°
H5C01H6109.5°109.6°
H13C26H23109.4°109.8°
H14C29H24109.4°109.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C32C31C30H16180.0°180.0°
C31C32C33H17180.0°179.9°
C32C31C30C280.2°0.0°
C31C32C33C270.7°0.0°
C32C31C30H15179.7°179.9°
C31C32C33H18179.3°180.0°
C30C31C32C330.6°0.0°
C31C30C28H15180.0°179.9°
C31C30C28C270.1°0.1°
C31C30C28C29179.4°179.9°
C30C31C32H17179.4°179.9°
C32C33C27H18180.0°179.9°
C32C33C27C280.4°0.1°
C32C33C27C26179.9°180.0°
C33C32C31H16179.4°180.0°
C30C28C27C330.0°0.1°
C30C28C27C29179.6°179.9°
C30C28C27C26179.8°179.9°
C30C28C29N25174.1°179.9°
C30C28C29H1454.8°60.3°
C28C30C31H16179.8°179.9°
C30C28C29H2466.6°60.6°
C33C27C28C26179.8°180.0°
C33C27C28C29179.6°180.0°
C33C27C26N25173.8°180.0°
C33C27C26H1366.8°60.4°
C27C33C32H17179.3°179.9°
C33C27C26H2354.4°60.4°
C27C28C29N255.4°0.0°
C28C27C26N256.5°0.0°
C28C27C26H13113.0°119.5°
C27C28C29H14124.8°119.5°
C27C28C30H15180.0°180.0°
C28C27C33H18179.6°180.0°
C28C27C26H23125.9°119.6°
C27C28C29H24113.9°119.6°
C29C28C27C260.6°0.0°
C28C29N25H14119.3°119.6°
C28C29N25H24119.3°119.5°
C28C29N25C269.6°0.0°
C28C29N25C23170.6°179.9°
C28C29H14H24122.0°120.9°
C29C28C30H150.5°0.2°
C27C26N25C2910.0°0.0°
C27C26N25H13119.4°119.5°
C27C26N25H23119.4°119.6°
C27C26N25C23170.2°180.0°
C27C26H13H23121.8°120.9°
C26C27C33H180.1°0.0°
C29N25C26C23179.8°180.0°
C29N25C23O240.2°180.0°
C29N25C23C22178.8°0.0°
C29N25C26H13109.4°119.5°
N25C29H14H24122.0°120.9°
C29N25C26H23129.4°119.6°
C26N25C23O24180.0°0.0°
C26N25C23C221.0°180.0°
N25C26H13H23121.8°120.9°
C26N25C29H14128.9°119.6°
C26N25C29H24109.8°119.5°
N25C23O24C22179.0°180.0°
N25C23C22C20107.6°90.0°
N25C23C22C1573.6°90.0°
C23N25C26H1370.4°60.4°
C23N25C29H1451.3°60.5°
C23N25C26H2350.8°60.4°
C23N25C29H2470.1°60.4°
C12N11C13N10178.4°180.0°
C12N11C13N142.2°0.2°
C12N11C13C34179.7°180.0°
C12N11N10C09179.9°179.8°
N11C12H1H2120.0°120.1°
N11C12H1H3120.0°120.0°
N11C12H2H3120.0°120.0°
O24C23C22C2073.4°90.0°
O24C23C22C15105.4°90.0°
C23C22C20O210.9°0.1°
C23C22C20C15178.8°180.0°
C23C22C20C19179.0°180.0°
C23C22C15N142.1°0.2°
C23C22C15C16179.7°180.0°
O21C20C22C19179.9°179.9°
O21C20C22C15179.7°180.0°
O21C20C19C17179.9°180.0°
O21C20C19H120.1°0.1°
C20C22C15N14179.1°179.7°
C20C22C15C160.9°0.0°
C22C20C19C170.2°0.1°
C22C20C19H12179.8°179.9°
C22C20O21H22180.0°90.0°
C15C22C20C190.2°0.1°
C22C15N14C16178.2°179.8°
C22C15N14C13175.8°139.3°
C22C15C16C171.1°0.0°
C22C15C16H11178.9°180.0°
C22C15N14H204.2°40.7°
N11C13N14C1576.7°173.3°
N11C13N14C34177.8°179.8°
C13N11N10C091.6°0.2°
N11C13C34C090.5°0.2°
C13N11C12H1178.3°90.0°
C13N11C12H261.8°149.9°
C13N11C12H358.2°29.9°
N11C13C34H19179.5°179.8°
N11C13N14H20103.2°6.8°
N10N11C13N14179.5°179.8°
N10N11C13C341.3°0.0°
N11N10C09C341.2°0.3°
N11N10C09C05179.7°180.0°
N10N11C12H10.0°90.0°
N10N11C12H2120.0°30.0°
N10N11C12H3120.0°150.0°
C20C19C17H12180.0°180.0°
C20C19C17C160.1°0.0°
C20C19C17O18180.0°180.0°
C19C20O21H220.1°90.1°
C15N14C13H20180.0°180.0°
C15N14C13C34105.4°6.5°
N14C15C16C17179.3°179.8°
N14C15C16H110.7°0.2°
C13N14C15C162.5°41.0°
N14C13C34C09178.7°180.0°
N14C13C34H191.3°0.0°
C15C16C17C190.7°0.0°
C15C16C17H11180.0°180.0°
C15C16C17O18179.4°180.0°
C16C15N14H20177.5°139.1°
C13C34C09N100.4°0.3°
C13C34C09H19180.0°180.0°
C13C34C09C05178.8°180.0°
C34C13N14H2074.6°173.4°
N10C09C34C05178.3°179.7°
N10C09C05C0425.5°0.3°
N10C09C05C06153.3°179.7°
N10C09C34H19179.6°179.7°
C19C17C16O18179.9°180.0°
C19C17C16H11179.3°180.0°
C19C17O18H21180.0°90.1°
C16C17C19H12179.9°180.0°
C16C17O18H210.1°89.9°
O18C17C16H110.6°0.0°
O18C17C19H120.0°0.0°
C01O02C03C046.1°179.8°
C01O02C03C08174.0°0.1°
O02C01H4H5120.0°120.0°
O02C01H4H6120.0°119.9°
O02C01H5H6120.0°120.0°
C34C09C05C04156.4°180.0°
C34C09C05C0624.8°0.0°
C09C05C04C06178.8°180.0°
C09C05C04C03179.1°180.0°
C09C05C06C07178.6°180.0°
C09C05C04H70.9°0.0°
C09C05C06H81.4°0.1°
C05C09C34H191.2°0.0°
C05C04C03H7180.0°180.0°
C05C04C03O02179.4°179.7°
C05C04C03C080.7°0.0°
C04C05C06C070.2°0.0°
C04C05C06H8179.8°180.0°
C03C04C05C060.3°0.0°
C04C03O02C08179.9°179.7°
C04C03C08C070.7°0.0°
C04C03C08H10179.3°179.9°
C05C06C07H8180.0°179.9°
C05C06C07C080.2°0.1°
C06C05C04H7179.7°180.0°
C05C06C07H9179.8°180.0°
O02C03C08C07179.4°179.7°
C03O02C01H4180.0°180.0°
C03O02C01H560.0°60.0°
C03O02C01H660.0°60.1°
O02C03C04H70.6°0.3°
O02C03C08H100.6°0.3°
C03C08C07C060.3°0.1°
C03C08C07H10180.0°179.9°
C08C03C04H7179.3°180.0°
C03C08C07H9179.7°180.0°
C06C07C08H9180.0°180.0°
C06C07C08H10179.7°180.0°
C08C07C06H8179.8°180.0°
H1C12H2H3120.0°119.9°
H4C01H5H6120.0°120.0°
H8C06C07H90.1°0.1°
H9C07C08H100.3°0.1°
H15C30C31H160.2°0.1°
H16C31C32H170.6°0.1°
H17C32C33H180.7°0.0°

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon