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SummaryGeometryRelated PDB entries

W79

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C07C04sing1.51Å1.51Å
C12N11doub1.32Å1.33ÅAromatic
C12C13sing1.38Å1.40ÅAromatic
N11C16sing1.32Å1.34ÅAromatic
C04C05doub1.39Å1.39ÅAromatic
C04C03sing1.38Å1.39ÅAromatic
C05C06sing1.38Å1.39ÅAromatic
C03C02doub1.39Å1.39ÅAromatic
C09C13sing1.51Å1.52Å
C09C08sing1.53Å1.53Å
C13C14doub1.38Å1.39ÅAromatic
C16C15doub1.39Å1.39ÅAromatic
C06C08sing1.51Å1.52Å
C06N01doub1.32Å1.35ÅAromatic
C02N01sing1.32Å1.35ÅAromatic
C02N02sing1.39Å1.36Å
C15C14sing1.40Å1.40ÅAromatic
C15C21sing1.48Å1.49Å
C21C22doub1.39Å1.39ÅAromatic
C21C26sing1.39Å1.39ÅAromatic
C22C23sing1.38Å1.40ÅAromatic
C26C25doub1.38Å1.39ÅAromatic
C23C24doub1.38Å1.39ÅAromatic
C25C24sing1.38Å1.39ÅAromatic
C25C27sing1.51Å1.51Å
C27N28sing1.47Å1.47Å
N28C29sing1.47Å1.47Å
N02H1sing0.97Å1.00Å
N02H2sing0.97Å1.00Å
C03H3sing1.08Å1.08Å
C07H4sing1.09Å1.10Å
C07H5sing1.09Å1.10Å
C07H6sing1.09Å1.10Å
C05H7sing1.08Å1.08Å
C08H8sing1.09Å1.10Å
C08H9sing1.09Å1.10Å
C09H10sing1.09Å1.10Å
C09H11sing1.09Å1.10Å
C14H12sing1.08Å1.08Å
C12H13sing1.08Å1.08Å
C16H14sing1.08Å1.08Å
C26H15sing1.08Å1.08Å
C22H16sing1.08Å1.08Å
C23H17sing1.08Å1.08Å
C24H18sing1.08Å1.08Å
C27H19sing1.09Å1.10Å
C27H20sing1.09Å1.10Å
N28H21sing1.01Å1.00Å
C29H23sing1.09Å1.10Å
C29H24sing1.09Å1.10Å
C29H25sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C07C04C05120.3°120.7°
C07C04C03120.7°120.7°
C04C07H4109.5°109.5°
C04C07H5109.5°109.5°
C04C07H6109.5°109.5°
N11C12C13121.4°121.0°
C12N11C16120.8°121.9°
N11C12H13119.3°119.5°
C12C13C09116.8°120.4°
C12C13C14119.2°119.3°
C13C12H13119.3°119.5°
N11C16C15120.7°120.6°
N11C16H14119.7°119.7°
C05C04C03119.0°118.5°
C04C05C06120.2°119.3°
C04C05H7119.9°120.3°
C04C03C02119.6°119.1°
C04C03H3120.2°120.5°
C05C06C08120.8°119.6°
C05C06N01119.3°120.9°
C06C05H7119.9°120.4°
C03C02N01119.8°120.6°
C03C02N02121.0°119.7°
C02C03H3120.2°120.5°
C13C09C08119.8°109.5°
C09C13C14123.9°120.4°
C13C09H10106.8°109.5°
C13C09H11106.8°109.5°
C09C08C06102.1°109.5°
C09C08H8111.3°109.5°
C09C08H9111.3°109.5°
C08C09H10106.8°109.5°
C08C09H11106.9°109.5°
C13C14C15117.9°118.3°
C13C14H12121.1°120.8°
C16C15C14120.0°118.9°
C16C15C21118.7°120.5°
C15C16H14119.7°119.7°
C08C06N01119.9°119.5°
C06C08H8111.3°109.5°
C06C08H9111.3°109.4°
C06N01C02122.1°121.6°
N01C02N02119.2°119.7°
C02N02H1109.5°120.1°
C02N02H2109.5°120.0°
C14C15C21121.3°120.5°
C15C14H12121.0°120.8°
C15C21C22120.3°120.1°
C15C21C26119.7°120.1°
C22C21C26120.0°119.8°
C21C22C23120.2°119.9°
C21C22H16119.9°120.0°
C21C26C25119.8°119.8°
C21C26H15120.1°120.1°
C22C23C24119.6°120.1°
C23C22H16119.9°120.1°
C22C23H17120.2°120.0°
C26C25C24120.3°120.1°
C26C25C27119.6°119.9°
C25C26H15120.1°120.1°
C23C24C25120.1°120.3°
C24C23H17120.2°119.9°
C23C24H18120.0°119.9°
C24C25C27120.0°120.0°
C25C24H18119.9°119.9°
C25C27N28107.5°109.5°
C25C27H19109.9°109.4°
C25C27H20109.9°109.5°
C27N28C29109.8°111.0°
N28C27H19110.0°109.5°
N28C27H20110.0°109.5°
C27N28H21109.4°111.0°
C29N28H21109.4°111.0°
N28C29H23109.5°109.5°
N28C29H24109.5°109.5°
N28C29H25109.5°109.5°
H1N02H2109.5°119.9°
H4C07H5109.5°109.5°
H4C07H6109.4°109.4°
H5C07H6109.5°109.5°
H8C08H9109.5°109.5°
H10C09H11109.5°109.4°
H19C27H20109.5°109.5°
H23C29H24109.4°109.4°
H23C29H25109.5°109.4°
H24C29H25109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C07C04C05C03179.6°180.0°
C07C04C05C06180.0°180.0°
C07C04C03C02179.9°180.0°
C07C04C03H30.2°0.1°
C04C07H4H5120.0°120.0°
C04C07H4H6120.0°120.0°
C04C07H5H6120.0°120.0°
C07C04C05H70.0°0.1°
N11C12C13H13180.0°180.0°
N11C12C13C09179.9°180.0°
N11C12C13C140.3°0.2°
C12N11C16C150.5°0.3°
C12N11C16H14179.5°180.0°
C13C12N11C160.4°0.1°
C12C13C09C14179.8°179.7°
C12C13C09C08177.9°90.3°
C12C13C14C150.3°0.3°
C12C13C09H1056.4°149.7°
C12C13C09H1160.7°29.7°
C12C13C14H12179.7°179.7°
N11C16C15H14180.0°179.7°
N11C16C15C140.5°0.3°
N11C16C15C21179.8°180.0°
C16N11C12H13179.7°180.0°
C04C05C06H7180.0°180.0°
C05C04C03C020.3°0.0°
C04C05C06C08178.6°180.0°
C04C05C06N011.1°0.0°
C05C04C03H3179.7°179.9°
C05C04C07H490.2°90.0°
C05C04C07H5149.8°150.0°
C05C04C07H629.8°30.0°
C03C04C05C060.5°0.0°
C04C03C02H3180.0°179.9°
C04C03C02N010.8°0.1°
C04C03C02N02179.3°179.7°
C03C04C07H490.2°90.1°
C03C04C07H529.8°30.0°
C03C04C07H6149.8°150.0°
C03C04C05H7179.5°179.9°
C05C06C08C0987.1°125.0°
C05C06C08N01177.5°180.0°
C05C06N01C021.6°0.0°
C05C06C08H831.7°115.0°
C05C06C08H9154.1°5.0°
C03C02N01C061.4°0.0°
C03C02N01N02178.5°179.7°
C03C02N02H1178.5°179.7°
C03C02N02H258.5°0.0°
C13C09C08H10121.5°120.0°
C13C09C08H11121.4°120.0°
C13C09C08C06175.0°180.0°
C09C13C14C15179.9°180.0°
C13C09C08H866.1°60.0°
C13C09C08H956.2°60.0°
C13C09H10H11115.3°120.0°
C09C13C14H120.1°0.0°
C09C13C12H130.1°0.0°
C08C09C13C142.3°90.0°
C09C08C06H8118.8°120.0°
C09C08C06H9118.8°120.0°
C09C08C06N0190.4°55.0°
C09C08H8H9123.4°120.0°
C08C09H10H11115.4°120.0°
C13C14C15C160.4°0.0°
C13C14C15H12180.0°180.0°
C13C14C15C21179.7°179.7°
C14C13C09H10123.7°30.0°
C14C13C09H11119.2°150.0°
C14C13C12H13179.8°179.7°
C16C15C14C21179.3°179.8°
C16C15C21C2232.0°180.0°
C16C15C21C26147.1°0.3°
C16C15C14H12179.6°180.0°
C08C06N01C02179.1°180.0°
C08C06C05H71.4°0.0°
C06C08H8H9123.4°120.0°
C06C08C09H1053.6°60.0°
C06C08C09H1163.5°60.0°
C06N01C02N02179.9°179.7°
N01C06C05H7178.9°179.9°
N01C06C08H8150.8°65.0°
N01C06C08H928.4°175.0°
N01C02N02H10.0°0.0°
N01C02N02H2120.0°179.7°
N01C02C03H3179.3°180.0°
C02N02H1H2120.0°179.7°
N02C02C03H30.8°0.4°
C14C15C21C22148.7°0.2°
C14C15C21C2632.1°179.5°
C14C15C16H14179.5°180.0°
C15C21C22C26179.1°179.7°
C15C21C22C23179.5°180.0°
C15C21C26C25179.1°180.0°
C21C15C14H120.3°0.3°
C21C15C16H140.2°0.3°
C15C21C26H150.9°0.0°
C15C21C22H160.5°0.1°
C21C22C23H16180.0°179.9°
C22C21C26C250.0°0.3°
C21C22C23C240.2°0.1°
C22C21C26H15180.0°179.7°
C21C22C23H17179.8°180.0°
C26C21C22C230.4°0.3°
C21C26C25H15180.0°180.0°
C21C26C25C240.6°0.0°
C21C26C25C27179.4°180.0°
C26C21C22H16179.6°179.8°
C22C23C24H17180.0°179.9°
C22C23C24C250.3°0.2°
C22C23C24H18179.7°179.9°
C26C25C24C230.7°0.2°
C26C25C24C27178.8°180.0°
C26C25C27N28111.4°90.0°
C26C25C24H18179.3°180.0°
C26C25C27H198.3°150.0°
C26C25C27H20128.9°30.0°
C23C24C25H18180.0°179.8°
C23C24C25C27179.5°179.8°
C24C23C22H16179.8°180.0°
C24C25C27N2867.4°90.0°
C24C25C26H15179.4°180.0°
C25C24C23H17179.7°179.8°
C24C25C27H19172.9°30.0°
C24C25C27H2052.3°150.0°
C25C27N28H19119.7°120.0°
C25C27N28H20119.7°120.0°
C25C27N28C29169.1°180.0°
C27C25C26H150.6°0.0°
C27C25C24H180.5°0.0°
C25C27H19H20120.9°120.0°
C25C27N28H2149.1°56.1°
C27N28C29H21120.1°123.9°
N28C27H19H20120.9°120.0°
C27N28C29H23180.0°60.0°
C27N28C29H2460.0°60.0°
C27N28C29H2560.0°180.0°
C29N28C27H1971.2°60.0°
C29N28C27H2049.5°60.0°
N28C29H23H24120.0°120.0°
N28C29H23H25120.0°120.0°
N28C29H24H25120.0°120.0°
H4C07H5H6120.0°120.0°
H8C08C09H10172.4°180.0°
H8C08C09H1155.3°60.0°
H9C08C09H1065.2°60.0°
H9C08C09H11177.7°180.0°
H16C22C23H170.2°0.1°
H17C23C24H180.3°0.0°
H19C27N28H21168.7°176.0°
H20C27N28H2170.6°63.9°
H21N28C29H2359.9°176.0°
H21N28C29H24179.9°64.0°
H21N28C29H2560.1°56.0°
H23C29H24H25120.0°119.9°

221716

PDB entries from 2024-06-26

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