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SummaryGeometryRelated PDB entries

W5P

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C03C02sing1.53Å1.44Å
C03C04sing1.53Å1.43Å
C02F01sing1.40Å1.28Å
C02C07sing1.53Å1.53Å
C07N06sing1.47Å1.45Å
C04C05sing1.53Å1.50Å
C05N06sing1.47Å1.51Å
N06C08sing1.38Å1.41Å
C08C16doub1.40Å1.39ÅAromatic
C08N09sing1.33Å1.32ÅAromatic
C15C16sing1.46Å1.39ÅAromatic
C15C14doub1.34Å1.32ÅAromatic
C16C12sing1.41Å1.34ÅAromatic
N09C10doub1.32Å1.26ÅAromatic
C14N13sing1.37Å1.33ÅAromatic
C12N13sing1.37Å1.31ÅAromatic
C12N11doub1.33Å1.31ÅAromatic
C10N11sing1.32Å1.25ÅAromatic
C10H101sing1.08Å1.08Å
C15H151sing1.08Å1.08Å
C02H021sing1.09Å1.10Å
C03H032sing1.09Å1.10Å
C03H031sing1.09Å1.10Å
C04H042sing1.09Å1.10Å
C04H041sing1.09Å1.10Å
C05H051sing1.09Å1.10Å
C05H052sing1.09Å1.10Å
C07H072sing1.09Å1.10Å
C07H071sing1.09Å1.10Å
C14H141sing1.08Å1.08Å
N13H131sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C02C03C04115.3°109.2°
C03C02F01109.7°109.5°
C03C02C07124.6°109.2°
C03C02H021108.2°109.5°
C02C03H032108.0°109.5°
C02C03H031108.0°109.5°
C03C04C05108.4°109.3°
C04C03H032108.0°109.6°
C04C03H031108.0°109.6°
C03C04H042109.7°109.6°
C03C04H041109.7°109.5°
F01C02C0795.7°109.5°
F01C02H021110.6°109.5°
C02C07N06106.8°109.6°
C07C02H021107.2°109.6°
C02C07H072110.1°109.5°
C02C07H071110.1°109.5°
C07N06C05103.7°111.2°
C07N06C08130.4°111.0°
N06C07H072110.1°109.4°
N06C07H071110.1°109.4°
C04C05N06114.6°109.5°
C05C04H042109.7°109.5°
C05C04H041109.8°109.4°
C04C05H051108.2°109.5°
C04C05H052108.2°109.5°
C05N06C08125.6°111.0°
N06C05H051108.2°109.5°
N06C05H052108.2°109.4°
N06C08C16127.2°120.8°
N06C08N09115.3°120.9°
C16C08N09117.5°118.3°
C08C16C15136.5°135.1°
C08C16C12115.9°118.7°
C08N09C10121.7°121.0°
C16C15C14106.3°106.8°
C15C16C12107.5°106.2°
C16C15H151126.8°126.6°
C15C14N13108.5°109.8°
C14C15H151126.8°126.6°
C15C14H141125.8°125.1°
C16C12N13107.4°107.2°
C16C12N11121.8°118.5°
N09C10N11123.4°122.7°
N09C10H101118.3°118.6°
C14N13C12110.2°110.0°
N13C14H141125.7°125.1°
C14N13H131124.9°125.0°
N13C12N11130.5°134.2°
C12N13H131124.9°125.0°
C12N11C10119.0°120.7°
N11C10H101118.3°118.6°
H032C03H031109.4°109.6°
H042C04H041109.5°109.5°
H051C05H052109.5°109.5°
H072C07H071109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C02C03C04H032120.9°119.9°
C02C03C04H031120.9°119.9°
C03C02F01C07129.9°119.7°
C03C02F01H021119.3°120.1°
C03C02C07H021127.6°120.0°
C03C02C07N0639.8°59.2°
C02C03C04C0532.4°57.7°
C02C03H032H031117.4°120.1°
C02C03C04H04287.4°62.3°
C02C03C04H041152.2°177.6°
C03C02C07H07279.8°60.9°
C03C02C07H071159.3°179.1°
C04C03C02F0185.3°62.2°
C04C03C02C0726.8°57.7°
C03C04C05H042119.8°120.0°
C03C04C05H041119.8°119.9°
C03C04C05N0659.1°59.2°
C04C03C02H021154.0°177.7°
C04C03H032H031117.3°120.3°
C03C04H042H041120.5°120.1°
C03C04C05H051179.8°179.2°
C03C04C05H05261.7°60.8°
F01C02C07H021113.7°120.1°
F01C02C07N0678.9°60.7°
F01C02C03H03235.6°57.7°
F01C02C03H031153.9°177.8°
F01C02C07H072161.5°179.2°
F01C02C07H07140.6°59.2°
C02C07N06H072119.6°120.1°
C02C07N06H071119.6°120.0°
C02C07N06C0555.7°61.7°
C02C07N06C08130.0°174.2°
C07C02C03H032147.6°177.6°
C07C02C03H03194.1°62.3°
C02C07H072H071121.2°120.0°
C07N06C05C0473.5°61.7°
C07N06C05C08174.7°124.1°
C07N06C08C1626.1°55.8°
C07N06C08N09154.5°124.4°
N06C07C02H021167.4°179.2°
C07N06C05H051165.7°178.2°
C07N06C05H05247.2°58.3°
N06C07H072H071121.3°119.9°
C04C05N06H051120.8°120.0°
C04C05N06H052120.7°120.0°
C04C05N06C08111.8°174.2°
C05C04C03H032153.2°177.6°
C05C04C03H03188.5°62.2°
C05C04H042H041120.5°120.0°
C04C05H051H052117.6°120.0°
C05N06C08C16160.7°180.0°
C05N06C08N0918.7°0.2°
N06C05C04H04260.7°60.8°
N06C05C04H041178.9°179.1°
N06C05H051H052117.7°120.0°
C05N06C07H07263.9°58.3°
C05N06C07H071175.2°178.2°
N06C08C16N09179.4°179.8°
N06C08C16C153.9°0.2°
N06C08C16C12174.0°180.0°
N06C08N09C10173.5°179.8°
C08N06C05H0519.0°54.1°
C08N06C05H052127.4°65.8°
C08N06C07H072110.4°65.7°
C08N06C07H07110.5°54.2°
C08C16C15C12178.0°179.8°
C08C16C15C14179.7°179.3°
C16C08N09C105.9°0.0°
C08C16C12N13179.2°179.8°
C08C16C12N115.4°0.5°
C08C16C15H1510.3°0.0°
N09C08C16C15176.7°180.0°
N09C08C16C125.3°0.2°
C08N09C10N116.4°0.0°
C08N09C10H101173.6°179.7°
C16C15C14H151180.0°179.4°
C16C15C14N133.0°0.7°
C15C16C12N130.7°0.0°
C15C16C12N11176.1°179.7°
C16C15C14H141176.9°180.0°
C14C15C16C122.3°0.4°
C15C14N13H141180.0°179.3°
C15C14N13C122.8°0.8°
C15C14N13H131177.3°179.2°
C16C12N13C141.2°0.5°
C16C12N13N11174.9°179.6°
C16C12N11C105.6°0.5°
C12C16C15H151177.7°179.8°
C16C12N13H131178.8°179.5°
N09C10N11C126.0°0.2°
N09C10N11H101180.0°179.8°
C14N13C12H131180.0°180.0°
C14N13C12N11173.7°179.9°
N13C14C15H151177.0°179.9°
N13C12N11C10179.9°180.0°
C12N13C14H141177.2°180.0°
C12N11C10H101174.0°180.0°
N11C12N13H1316.3°0.1°
H151C15C14H1413.0°0.6°
H021C02C03H03285.1°62.4°
H021C02C03H03133.1°57.7°
H021C02C07H07247.8°59.1°
H021C02C07H07173.0°60.9°
H032C03C04H04233.4°57.6°
H032C03C04H04186.9°62.6°
H031C03C04H042151.7°177.8°
H031C03C04H04131.3°57.6°
H042C04C05H05160.0°59.2°
H042C04C05H052178.5°179.2°
H041C04C05H05160.4°60.9°
H041C04C05H05258.1°59.1°
H141C14N13H1312.8°0.0°

246704

PDB entries from 2025-12-24

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