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W5H

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C6doub1.21Å1.23Å
C6Osing1.34Å1.23Å
C6C5sing1.51Å1.56Å
C5C4sing1.51Å1.48Å
C3C4doub1.35Å1.37ÅAromatic
C3C2sing1.41Å1.42ÅAromatic
C4Nsing1.36Å1.39ÅAromatic
C2C1doub1.35Å1.38ÅAromatic
NCsing1.46Å1.45Å
NC1sing1.36Å1.39ÅAromatic
C1H1sing1.08Å1.08Å
C5H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C3H4sing1.08Å1.08Å
C2H5sing1.08Å1.08Å
OH6sing0.97Å0.95Å
CH7sing1.09Å1.10Å
CH8sing1.09Å1.10Å
CH9sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C6O125.8°120.0°
O1C6C5116.3°120.0°
OC6C5118.0°120.0°
C6OH6109.5°117.0°
C6C5C4112.6°109.5°
C6C5H2108.7°109.5°
C6C5H3108.7°109.5°
C5C4C3130.5°125.9°
C5C4N122.0°125.9°
C4C5H2108.7°109.4°
C4C5H3108.7°109.5°
C4C3C2108.1°107.4°
C3C4N107.4°108.3°
C4C3H4125.9°126.3°
C3C2C1108.2°107.4°
C2C3H4125.9°126.3°
C3C2H5125.9°126.3°
C4NC125.0°125.6°
C4NC1109.5°108.7°
C2C1N106.8°108.2°
C2C1H1126.6°125.9°
C1C2H5125.9°126.2°
CNC1125.5°125.7°
NCH7109.5°109.5°
NCH8109.4°109.5°
NCH9109.5°109.5°
NC1H1126.6°125.9°
H2C5H3109.4°109.5°
H7CH8109.5°109.4°
H7CH9109.5°109.5°
H8CH9109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C6OC5178.4°180.0°
O1C6C5C4163.8°0.0°
O1C6C5H275.7°119.9°
O1C6C5H343.3°120.0°
O1C6OH60.0°0.0°
OC6C5C414.7°180.0°
OC6C5H2105.8°60.1°
OC6C5H3135.2°60.0°
C6C5C4H2120.5°120.0°
C6C5C4H3120.5°120.0°
C6C5C4C3103.3°84.9°
C6C5C4N79.6°95.0°
C6C5H2H3118.5°120.1°
C5C6OH6178.4°180.0°
C5C4C3N177.4°179.9°
C5C4C3C2176.8°180.0°
C5C4NC3.2°0.0°
C5C4NC1176.9°179.9°
C4C5H2H3118.6°120.0°
C5C4C3H43.2°0.1°
C4C3C2H4180.0°179.9°
C4C3C2C10.3°0.1°
C3C4NC179.1°179.9°
C3C4NC10.7°0.2°
C3C4C5H2136.2°35.1°
C3C4C5H317.2°155.0°
C4C3C2H5179.7°180.0°
C2C3C4N0.6°0.0°
C3C2C1H5180.0°179.9°
C3C2C1N0.2°0.2°
C3C2C1H1179.8°180.0°
C4NC1C20.6°0.2°
C4NCC1179.8°179.9°
C4NC1H1179.4°180.0°
NC4C5H240.8°145.0°
NC4C5H3159.9°25.0°
NC4C3H4179.4°180.0°
C4NCH7180.0°90.1°
C4NCH860.0°150.0°
C4NCH960.0°30.0°
C2C1NC179.3°179.9°
C2C1NH1180.0°179.8°
C1C2C3H4179.7°179.8°
CNC1H10.7°0.1°
NCH7H8120.0°120.0°
NCH7H9120.0°120.0°
NCH8H9120.0°120.0°
NC1C2H5179.8°179.9°
C1NCH70.1°90.0°
C1NCH8119.8°29.9°
C1NCH9120.1°149.9°
H1C1C2H50.2°0.1°
H4C3C2H50.3°0.1°
H7CH8H9120.0°120.0°

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PDB entries from 2024-07-24

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