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W3D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
BRC5sing1.89Å1.87Å
C6C5doub1.37Å1.35Å
C6Csing1.40Å1.40Å
OCdoub1.22Å1.23Å
C5C4sing1.40Å1.42Å
CNsing1.35Å1.38Å
C4C3doub1.35Å1.34Å
NC3sing1.36Å1.36Å
NC1sing1.46Å1.46Å
C1C2sing1.51Å1.51Å
C2O1doub1.21Å1.31Å
C2O2sing1.34Å1.20Å
C4H1sing1.08Å1.08Å
C6H2sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C1H4sing1.09Å1.10Å
C1H5sing1.09Å1.10Å
O2H6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
BRC5C6118.7°120.4°
BRC5C4118.2°120.3°
C5C6C119.4°119.3°
C6C5C4123.1°119.3°
C5C6H2120.3°120.3°
C6CO123.1°120.0°
C6CN116.8°120.1°
CC6H2120.3°120.4°
OCN119.9°120.0°
C5C4C3116.2°119.9°
C5C4H1121.9°120.1°
CNC3122.2°120.8°
CNC1118.5°119.6°
C4C3N122.0°120.7°
C3C4H1121.9°120.0°
C4C3H3119.0°119.7°
C3NC1119.3°119.6°
NC3H3119.0°119.6°
NC1C2111.0°109.5°
NC1H4109.1°109.5°
NC1H5109.1°109.4°
C1C2O1116.3°120.0°
C1C2O2121.3°120.0°
C2C1H4109.1°109.5°
C2C1H5109.1°109.5°
O1C2O2122.4°120.0°
C2O2H6109.5°117.0°
H4C1H5109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
BRC5C6C4177.4°179.9°
BRC5C6C175.3°179.9°
BRC5C4C3174.7°180.0°
BRC5C4H15.3°0.3°
BRC5C6H24.7°0.0°
C5C6CH2180.0°180.0°
C5C6CO172.8°180.0°
C5C6CN2.4°0.0°
C6C5C4C32.7°0.0°
C6C5C4H1177.3°179.7°
C6CON175.0°180.0°
CC6C5C42.0°0.0°
C6CNC36.4°0.0°
C6CNC1172.3°180.0°
OCNC3169.0°180.0°
OCNC112.3°0.0°
OCC6H27.2°0.0°
C5C4C3H1180.0°179.7°
C5C4C3N1.3°0.0°
C4C5C6H2177.9°180.0°
C5C4C3H3178.7°179.7°
CNC3C45.9°0.0°
CNC3C1178.7°180.0°
CNC1C2112.7°90.0°
NCC6H2177.6°180.0°
CNC3H3174.1°179.7°
CNC1H47.5°149.9°
CNC1H5127.1°30.0°
C4C3NH3180.0°179.7°
C4C3NC1172.8°180.0°
C3NC1C266.0°90.0°
NC3C4H1178.7°179.7°
C3NC1H4173.8°30.1°
C3NC1H554.2°150.0°
NC1C2H4120.2°120.1°
NC1C2H5120.2°120.0°
NC1C2O18.0°0.0°
NC1C2O2171.5°180.0°
C1NC3H37.2°0.3°
NC1H4H5119.3°119.9°
C1C2O1O2179.5°180.0°
C2C1H4H5119.3°120.0°
C1C2O2H6179.4°180.0°
O1C2C1H4112.2°120.0°
O1C2C1H5128.2°120.0°
O1C2O2H60.0°0.0°
O2C2C1H468.3°59.9°
O2C2C1H551.3°60.0°
H1C4C3H31.3°0.0°

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PDB entries from 2024-07-17

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