Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

W1M

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CNsing1.47Å1.46Å
C1Nsing1.35Å1.38ÅAromatic
C1C2doub1.35Å1.36ÅAromatic
NN1sing1.28Å1.36ÅAromatic
C2C3sing1.42Å1.44ÅAromatic
N1C3doub1.32Å1.35ÅAromatic
C3C4sing1.48Å1.48Å
C4Odoub1.22Å1.23Å
C4N2sing1.35Å1.37Å
N2C5sing1.40Å1.42Å
C6C5doub1.39Å1.39ÅAromatic
C6C7sing1.38Å1.38ÅAromatic
C5C10sing1.39Å1.39ÅAromatic
C7C8doub1.38Å1.38ÅAromatic
C10C9doub1.40Å1.39ÅAromatic
C8C9sing1.40Å1.39ÅAromatic
C9C11sing1.48Å1.50Å
C11O2doub1.21Å1.25Å
C11O1sing1.35Å1.26Å
C6H1sing1.08Å1.08Å
C7H2sing1.08Å1.08Å
C8H3sing1.08Å1.08Å
C10H4sing1.08Å1.08Å
O1H5sing0.97Å0.95Å
N2H6sing0.97Å1.00Å
C2H7sing1.08Å1.08Å
C1H8sing1.08Å1.08Å
CH9sing1.09Å1.10Å
CH10sing1.09Å1.10Å
CH11sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CNC1127.6°124.9°
CNN1119.2°124.9°
NCH9109.5°109.4°
NCH10109.5°109.4°
NCH11109.5°109.4°
NC1C2106.7°107.2°
C1NN1113.2°110.2°
NC1H8126.7°126.4°
C1C2C3104.9°105.5°
C1C2H7127.6°127.2°
C2C1H8126.7°126.3°
NN1C3103.7°110.1°
C2C3N1111.5°107.0°
C2C3C4128.2°126.5°
C3C2H7127.5°127.3°
N1C3C4120.1°126.5°
C3C4O120.6°120.0°
C3C4N2116.3°120.0°
OC4N2123.0°120.0°
C4N2C5127.1°120.0°
C4N2H6116.5°120.0°
N2C5C6118.6°120.0°
N2C5C10121.7°120.0°
C5N2H6116.5°120.0°
C5C6C7120.1°120.2°
C6C5C10119.7°120.0°
C5C6H1120.0°119.9°
C6C7C8120.2°120.2°
C7C6H1120.0°119.9°
C6C7H2119.9°119.8°
C5C10C9120.1°119.8°
C5C10H4119.9°120.1°
C7C8C9120.3°120.0°
C8C7H2119.9°119.9°
C7C8H3119.8°120.0°
C10C9C8119.6°119.8°
C10C9C11120.0°120.1°
C9C10H4120.0°120.1°
C8C9C11120.3°120.1°
C9C8H3119.8°120.0°
C9C11O2117.5°120.0°
C9C11O1117.6°120.0°
O2C11O1124.9°120.1°
C11O1H5109.5°117.0°
H9CH10109.4°109.5°
H9CH11109.5°109.5°
H10CH11109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CNC1N1178.3°180.0°
CNC1C2177.6°180.0°
CNN1C3177.9°180.0°
CNC1H82.4°0.1°
NCH9H10120.0°120.0°
NCH9H11120.0°120.0°
NCH10H11120.0°120.0°
NC1C2H8180.0°179.9°
NC1C2C30.5°0.0°
C1NN1C30.6°0.1°
NC1C2H7179.5°180.0°
C1NCH9178.2°90.0°
C1NCH1061.8°150.0°
C1NCH1158.2°30.0°
C2C1NN10.7°0.1°
C1C2C3H7180.0°180.0°
C1C2C3N10.1°0.0°
C1C2C3C4174.7°179.9°
NN1C3C20.3°0.1°
NN1C3C4174.8°180.0°
N1NC1H8179.3°180.0°
N1NCH90.0°90.0°
N1NCH10120.0°30.0°
N1NCH11120.0°150.0°
C2C3N1C4175.1°179.9°
C2C3C4O175.6°0.1°
C2C3C4N28.3°179.9°
C3C2C1H8179.5°179.9°
N1C3C4O10.2°180.0°
N1C3C4N2165.9°0.0°
N1C3C2H7179.8°179.9°
C3C4ON2175.9°180.0°
C3C4N2C5173.2°175.4°
C3C4N2H66.8°4.6°
C4C3C2H75.2°0.0°
OC4N2C510.8°4.6°
OC4N2H6169.3°175.5°
C4N2C5H6180.0°179.9°
C4N2C5C649.0°144.6°
C4N2C5C10129.8°35.1°
N2C5C6C10178.8°179.7°
N2C5C6C7178.0°179.7°
N2C5C10C9178.9°179.7°
N2C5C6H12.0°0.4°
N2C5C10H41.0°0.3°
C5C6C7H1180.0°179.9°
C5C6C7C80.6°0.0°
C6C5C10C90.1°0.1°
C5C6C7H2179.4°180.0°
C6C5C10H4179.8°180.0°
C6C5N2H6131.0°35.3°
C7C6C5C100.8°0.0°
C6C7C8H2180.0°180.0°
C6C7C8C90.6°0.0°
C6C7C8H3179.4°180.0°
C5C10C9H4180.0°180.0°
C5C10C9C81.3°0.0°
C5C10C9C11175.2°179.9°
C10C5C6H1179.2°180.0°
C10C5N2H650.2°145.0°
C7C8C9C101.5°0.0°
C7C8C9H3180.0°180.0°
C7C8C9C11175.0°180.0°
C8C7C6H1179.4°179.9°
C10C9C8C11176.5°180.0°
C10C9C11O27.7°0.1°
C10C9C11O1171.4°180.0°
C10C9C8H3178.5°180.0°
C8C9C11O2175.8°180.0°
C8C9C11O15.1°0.0°
C9C8C7H2179.5°180.0°
C8C9C10H4178.7°180.0°
C9C11O2O1179.0°179.9°
C11C9C8H35.0°0.0°
C11C9C10H44.8°0.0°
C9C11O1H5179.0°180.0°
O2C11O1H50.0°0.1°
H1C6C7H20.6°0.0°
H2C7C8H30.5°0.0°
H7C2C1H80.5°0.1°
H9CH10H11120.0°120.1°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon