Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VZS

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
COsing1.43Å1.43Å
OC1sing1.36Å1.37Å
C2C1doub1.39Å1.39ÅAromatic
C2C3sing1.38Å1.38ÅAromatic
C1C7sing1.39Å1.40ÅAromatic
C3C4doub1.38Å1.39ÅAromatic
C7Nsing1.40Å1.42Å
C7C6doub1.39Å1.39ÅAromatic
NC8sing1.35Å1.38Å
C4C6sing1.38Å1.39ÅAromatic
C4C5sing1.51Å1.51Å
C10N2sing1.35Å1.36ÅAromatic
C10N4doub1.30Å1.30ÅAromatic
C8N1sing1.35Å1.35Å
C8O1doub1.22Å1.23Å
N1N2sing1.40Å1.40Å
N2C9sing1.35Å1.36ÅAromatic
N4N3sing1.29Å1.39ÅAromatic
C9N3doub1.31Å1.30ÅAromatic
N1H1sing0.97Å1.00Å
C5H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C5H4sing1.09Å1.10Å
C6H5sing1.08Å1.08Å
C10H6sing1.08Å1.08Å
C9H7sing1.08Å1.08Å
NH8sing0.97Å1.00Å
CH9sing1.09Å1.10Å
CH10sing1.09Å1.10Å
CH11sing1.09Å1.10Å
C3H12sing1.08Å1.08Å
C2H13sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
COC1117.8°117.0°
OCH9109.5°109.5°
OCH10109.5°109.5°
OCH11109.4°109.5°
OC1C2124.8°120.1°
OC1C7114.8°120.1°
C1C2C3119.4°120.0°
C2C1C7120.3°119.8°
C1C2H13120.3°120.0°
C2C3C4121.6°120.2°
C2C3H12119.2°119.9°
C3C2H13120.3°120.0°
C1C7N117.8°120.1°
C1C7C6119.0°119.8°
C3C4C6118.5°120.2°
C3C4C5120.8°119.9°
C4C3H12119.2°119.9°
NC7C6123.2°120.1°
C7NC8125.8°120.0°
C7NH8117.1°119.9°
C7C6C4121.2°120.0°
C7C6H5119.4°120.0°
NC8N1114.0°120.0°
NC8O1123.6°120.0°
C8NH8117.1°120.1°
C6C4C5120.6°119.9°
C4C6H5119.4°120.0°
C4C5H2109.5°109.5°
C4C5H3109.5°109.5°
C4C5H4109.5°109.5°
N2C10N4110.1°107.3°
C10N2N1125.8°127.0°
C10N2C9105.6°106.0°
N2C10H6124.9°126.3°
C10N4N3107.1°109.7°
N4C10H6125.0°126.4°
N1C8O1122.4°120.0°
C8N1N2123.1°120.0°
C8N1H1118.4°120.0°
N1N2C9128.6°127.0°
N2N1H1118.4°120.0°
N2C9N3110.1°107.3°
N2C9H7125.0°126.4°
N4N3C9107.1°109.6°
N3C9H7124.9°126.3°
H2C5H3109.5°109.5°
H2C5H4109.5°109.4°
H3C5H4109.4°109.5°
H9CH10109.5°109.5°
H9CH11109.5°109.5°
H10CH11109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
COC1C25.7°0.0°
COC1C7171.4°180.0°
OCH9H10120.0°120.0°
OCH9H11120.0°120.0°
OCH10H11120.0°119.9°
OC1C2C7176.9°180.0°
OC1C2C3175.9°179.7°
OC1C7N3.3°0.1°
OC1C7C6175.7°180.0°
C1OCH9180.0°180.0°
C1OCH1060.0°60.0°
C1OCH1160.0°59.9°
OC1C2H134.1°0.0°
C1C2C3H13180.0°179.7°
C1C2C3C40.2°0.5°
C2C1C7N179.5°180.0°
C2C1C7C61.5°0.0°
C1C2C3H12179.8°180.0°
C3C2C1C71.0°0.2°
C2C3C4H12180.0°179.5°
C2C3C4C61.0°0.5°
C2C3C4C5178.4°179.8°
C1C7NC6179.0°180.0°
C1C7NC8176.8°145.4°
C1C7C6C40.7°0.0°
C1C7C6H5179.3°179.9°
C1C7NH83.2°34.7°
C7C1C2H13179.0°180.0°
C3C4C6C70.5°0.2°
C3C4C6C5179.4°179.8°
C3C4C5H289.7°90.3°
C3C4C5H3150.3°29.8°
C3C4C5H430.3°149.8°
C3C4C6H5179.5°179.8°
C4C3C2H13179.8°179.8°
C7NC8H8180.0°179.9°
NC7C6C4179.7°180.0°
C7NC8N1172.0°175.6°
C7NC8O18.0°4.4°
NC7C6H50.3°0.0°
C6C7NC82.2°34.6°
C7C6C4H5180.0°180.0°
C7C6C4C5178.9°180.0°
C6C7NH8177.8°145.4°
NC8N1O1180.0°179.9°
NC8N1N2180.0°180.0°
NC8N1H10.0°0.4°
C6C4C5H289.7°90.0°
C6C4C5H330.3°150.0°
C6C4C5H4150.3°30.0°
C6C4C3H12179.0°180.0°
C4C5H2H3120.0°120.0°
C4C5H2H4120.0°120.0°
C4C5H3H4120.0°120.0°
C5C4C6H51.1°0.1°
C5C4C3H121.6°0.2°
N2C10N4H6180.0°179.9°
C10N2N1C8112.6°179.7°
C10N2N1C9177.4°179.8°
N2C10N4N30.4°0.0°
C10N2C9N30.6°0.1°
C10N2N1H167.4°0.1°
C10N2C9H7179.4°180.0°
N4C10N2N1177.3°179.9°
N4C10N2C90.6°0.1°
C10N4N3C90.0°0.0°
C8N1N2H1180.0°179.6°
C8N1N2C970.1°0.4°
N1C8NH87.9°4.5°
O1C8N1N20.0°0.1°
O1C8N1H1180.0°179.7°
O1C8NH8172.0°175.6°
N1N2C9N3177.2°179.9°
N1N2C10H62.8°0.2°
N1N2C9H72.8°0.2°
N2C9N3N40.4°0.1°
N2C9N3H7180.0°179.9°
C9N2N1H1109.9°179.9°
C9N2C10H6179.4°180.0°
N3N4C10H6179.6°179.9°
N4N3C9H7179.6°179.9°
H2C5H3H4120.0°119.9°
H9CH10H11120.0°120.0°
H12C3C2H130.2°0.2°

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon