VYP
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | sing | 1.38Å | 1.37Å | |
C2 | N7 | doub | 1.33Å | 1.39Å | Aromatic |
C2 | N3 | sing | 1.33Å | 1.39Å | Aromatic |
N7 | C6 | sing | 1.32Å | 1.34Å | Aromatic |
N3 | C4 | doub | 1.32Å | 1.34Å | Aromatic |
C6 | C5 | doub | 1.40Å | 1.41Å | Aromatic |
C4 | C5 | sing | 1.40Å | 1.40Å | Aromatic |
C5 | C8 | sing | 1.48Å | 1.46Å | |
C8 | C9 | doub | 1.40Å | 1.40Å | Aromatic |
C8 | N13 | sing | 1.33Å | 1.36Å | Aromatic |
C9 | C10 | sing | 1.38Å | 1.40Å | Aromatic |
N13 | C12 | doub | 1.32Å | 1.38Å | Aromatic |
C10 | N11 | doub | 1.32Å | 1.34Å | Aromatic |
C12 | N14 | sing | 1.38Å | 1.40Å | |
C12 | N11 | sing | 1.32Å | 1.39Å | Aromatic |
C18 | C19 | sing | 1.53Å | 1.54Å | |
C18 | O17 | sing | 1.43Å | 1.40Å | |
C19 | N14 | sing | 1.47Å | 1.48Å | |
N14 | C15 | sing | 1.47Å | 1.48Å | |
O17 | C16 | sing | 1.43Å | 1.40Å | |
C16 | C15 | sing | 1.53Å | 1.54Å | |
C9 | H24 | sing | 1.08Å | 1.08Å | |
C10 | H25 | sing | 1.08Å | 1.08Å | |
C4 | H22 | sing | 1.08Å | 1.08Å | |
C6 | H23 | sing | 1.08Å | 1.08Å | |
C15 | H26 | sing | 1.09Å | 1.10Å | |
C15 | H27 | sing | 1.09Å | 1.10Å | |
C19 | H33 | sing | 1.09Å | 1.10Å | |
C19 | H32 | sing | 1.09Å | 1.10Å | |
C16 | H28 | sing | 1.09Å | 1.10Å | |
C16 | H29 | sing | 1.09Å | 1.10Å | |
C18 | H31 | sing | 1.09Å | 1.10Å | |
C18 | H30 | sing | 1.09Å | 1.10Å | |
N1 | H21 | sing | 0.97Å | 1.00Å | |
N1 | H20 | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N1 | C2 | N7 | 117.1° | 119.1° |
N1 | C2 | N3 | 117.3° | 119.1° |
C2 | N1 | H21 | 109.5° | 120.0° |
C2 | N1 | H20 | 109.4° | 120.0° |
N7 | C2 | N3 | 125.6° | 121.9° |
C2 | N7 | C6 | 115.2° | 120.9° |
C2 | N3 | C4 | 115.2° | 120.9° |
N7 | C6 | C5 | 123.8° | 119.1° |
N7 | C6 | H23 | 118.1° | 120.5° |
N3 | C4 | C5 | 123.9° | 119.0° |
N3 | C4 | H22 | 118.1° | 120.5° |
C6 | C5 | C4 | 116.4° | 118.3° |
C6 | C5 | C8 | 121.5° | 120.9° |
C5 | C6 | H23 | 118.1° | 120.4° |
C4 | C5 | C8 | 122.1° | 120.8° |
C5 | C4 | H22 | 118.1° | 120.5° |
C5 | C8 | C9 | 122.3° | 120.5° |
C5 | C8 | N13 | 115.4° | 120.5° |
C9 | C8 | N13 | 122.3° | 119.0° |
C8 | C9 | C10 | 117.1° | 118.4° |
C8 | C9 | H24 | 121.5° | 120.7° |
C8 | N13 | C12 | 116.1° | 120.6° |
C9 | C10 | N11 | 124.0° | 119.3° |
C10 | C9 | H24 | 121.4° | 120.8° |
C9 | C10 | H25 | 118.0° | 120.3° |
N13 | C12 | N14 | 116.8° | 119.1° |
N13 | C12 | N11 | 125.5° | 121.7° |
C10 | N11 | C12 | 114.9° | 121.0° |
N11 | C10 | H25 | 118.0° | 120.4° |
N14 | C12 | N11 | 117.6° | 119.1° |
C12 | N14 | C19 | 119.9° | 111.0° |
C12 | N14 | C15 | 119.5° | 111.0° |
C19 | C18 | O17 | 110.6° | 109.3° |
C18 | C19 | N14 | 107.4° | 109.2° |
C18 | C19 | H33 | 110.0° | 109.5° |
C18 | C19 | H32 | 110.0° | 109.5° |
C19 | C18 | H31 | 109.2° | 109.5° |
C19 | C18 | H30 | 109.2° | 109.5° |
C18 | O17 | C16 | 112.5° | 113.7° |
O17 | C18 | H31 | 109.2° | 109.5° |
O17 | C18 | H30 | 109.2° | 109.4° |
C19 | N14 | C15 | 113.5° | 110.8° |
N14 | C19 | H33 | 110.0° | 109.5° |
N14 | C19 | H32 | 110.0° | 109.5° |
N14 | C15 | C16 | 108.0° | 109.3° |
N14 | C15 | H26 | 109.9° | 109.5° |
N14 | C15 | H27 | 109.8° | 109.5° |
O17 | C16 | C15 | 110.8° | 109.2° |
O17 | C16 | H28 | 109.1° | 109.5° |
O17 | C16 | H29 | 109.1° | 109.5° |
C16 | C15 | H26 | 109.8° | 109.5° |
C16 | C15 | H27 | 109.9° | 109.4° |
C15 | C16 | H28 | 109.2° | 109.5° |
C15 | C16 | H29 | 109.1° | 109.5° |
H26 | C15 | H27 | 109.4° | 109.5° |
H33 | C19 | H32 | 109.5° | 109.5° |
H28 | C16 | H29 | 109.5° | 109.6° |
H31 | C18 | H30 | 109.5° | 109.6° |
H21 | N1 | H20 | 109.5° | 119.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C2 | N7 | N3 | 179.9° | 179.2° |
N1 | C2 | N7 | C6 | 178.8° | 180.0° |
N1 | C2 | N3 | C4 | 178.8° | 179.7° |
C2 | N1 | H21 | H20 | 120.0° | 180.0° |
N7 | C2 | N3 | C4 | 1.1° | 0.5° |
C2 | N7 | C6 | C5 | 0.1° | 0.6° |
C2 | N7 | C6 | H23 | 179.9° | 179.5° |
N7 | C2 | N1 | H21 | 0.0° | 0.0° |
N7 | C2 | N1 | H20 | 120.0° | 179.9° |
N3 | C2 | N7 | C6 | 1.1° | 0.8° |
C2 | N3 | C4 | C5 | 0.1° | 0.0° |
C2 | N3 | C4 | H22 | 179.9° | 179.7° |
N3 | C2 | N1 | H21 | 179.9° | 179.2° |
N3 | C2 | N1 | H20 | 59.9° | 0.9° |
N7 | C6 | C5 | H23 | 180.0° | 179.9° |
N7 | C6 | C5 | C4 | 1.2° | 0.1° |
N7 | C6 | C5 | C8 | 176.9° | 180.0° |
N3 | C4 | C5 | C6 | 1.2° | 0.2° |
N3 | C4 | C5 | H22 | 180.0° | 179.7° |
N3 | C4 | C5 | C8 | 176.9° | 179.7° |
C6 | C5 | C4 | C8 | 178.1° | 180.0° |
C6 | C5 | C8 | C9 | 168.9° | 0.0° |
C6 | C5 | C8 | N13 | 12.0° | 179.9° |
C6 | C5 | C4 | H22 | 178.8° | 180.0° |
C4 | C5 | C8 | C9 | 13.2° | 180.0° |
C4 | C5 | C8 | N13 | 166.0° | 0.0° |
C4 | C5 | C6 | H23 | 178.8° | 179.9° |
C5 | C8 | C9 | N13 | 179.1° | 180.0° |
C5 | C8 | C9 | C10 | 177.8° | 180.0° |
C5 | C8 | N13 | C12 | 179.6° | 179.4° |
C5 | C8 | C9 | H24 | 2.2° | 0.3° |
C8 | C5 | C4 | H22 | 3.1° | 0.0° |
C8 | C5 | C6 | H23 | 3.1° | 0.1° |
C8 | C9 | C10 | H24 | 180.0° | 179.8° |
C9 | C8 | N13 | C12 | 1.2° | 0.5° |
C8 | C9 | C10 | N11 | 1.4° | 0.3° |
C8 | C9 | C10 | H25 | 178.6° | 179.8° |
N13 | C8 | C9 | C10 | 1.3° | 0.0° |
C8 | N13 | C12 | N14 | 172.3° | 179.8° |
C8 | N13 | C12 | N11 | 4.0° | 0.8° |
N13 | C8 | C9 | H24 | 178.7° | 179.8° |
C9 | C10 | N11 | H25 | 180.0° | 180.0° |
C9 | C10 | N11 | C12 | 0.9° | 0.0° |
N13 | C12 | N11 | C10 | 3.8° | 0.5° |
N13 | C12 | N14 | N11 | 176.6° | 179.5° |
N13 | C12 | N14 | C19 | 10.2° | 179.5° |
N13 | C12 | N14 | C15 | 158.8° | 56.9° |
C10 | N11 | C12 | N14 | 172.4° | 180.0° |
N11 | C10 | C9 | H24 | 178.6° | 180.0° |
C12 | N14 | C19 | C18 | 154.4° | 177.7° |
C12 | N14 | C19 | C15 | 150.3° | 123.8° |
C12 | N14 | C15 | C16 | 155.1° | 177.6° |
C12 | N14 | C15 | H26 | 35.3° | 62.5° |
C12 | N14 | C15 | H27 | 85.1° | 57.7° |
C12 | N14 | C19 | H33 | 34.7° | 57.7° |
C12 | N14 | C19 | H32 | 85.9° | 62.4° |
N11 | C12 | N14 | C19 | 173.2° | 0.0° |
N11 | C12 | N14 | C15 | 24.6° | 123.6° |
C12 | N11 | C10 | H25 | 179.1° | 180.0° |
C19 | C18 | O17 | H31 | 120.2° | 120.0° |
C19 | C18 | O17 | H30 | 120.2° | 119.9° |
C18 | C19 | N14 | H33 | 119.7° | 120.0° |
C18 | C19 | N14 | H32 | 119.7° | 119.9° |
C18 | C19 | N14 | C15 | 55.3° | 58.6° |
C19 | C18 | O17 | C16 | 62.0° | 58.6° |
C18 | C19 | H33 | H32 | 120.9° | 120.1° |
C19 | C18 | H31 | H30 | 119.5° | 120.2° |
O17 | C18 | C19 | N14 | 56.9° | 56.8° |
C18 | O17 | C16 | C15 | 60.9° | 58.7° |
O17 | C18 | C19 | H33 | 176.5° | 176.7° |
O17 | C18 | C19 | H32 | 62.8° | 63.1° |
C18 | O17 | C16 | H28 | 178.9° | 61.3° |
C18 | O17 | C16 | H29 | 59.3° | 178.6° |
O17 | C18 | H31 | H30 | 119.5° | 120.0° |
C19 | N14 | C15 | C16 | 54.5° | 58.7° |
C19 | N14 | C15 | H26 | 174.2° | 61.3° |
C19 | N14 | C15 | H27 | 65.3° | 178.6° |
N14 | C19 | H33 | H32 | 120.9° | 120.1° |
N14 | C19 | C18 | H31 | 177.0° | 176.8° |
N14 | C19 | C18 | H30 | 63.3° | 63.1° |
N14 | C15 | C16 | O17 | 55.0° | 56.9° |
N14 | C15 | C16 | H26 | 119.8° | 120.0° |
N14 | C15 | C16 | H27 | 119.8° | 119.9° |
N14 | C15 | H26 | H27 | 120.7° | 120.1° |
C15 | N14 | C19 | H33 | 175.0° | 178.5° |
C15 | N14 | C19 | H32 | 64.4° | 61.3° |
N14 | C15 | C16 | H28 | 175.2° | 63.0° |
N14 | C15 | C16 | H29 | 65.2° | 176.8° |
O17 | C16 | C15 | H28 | 120.2° | 119.9° |
O17 | C16 | C15 | H29 | 120.2° | 119.9° |
O17 | C16 | C15 | H26 | 174.8° | 63.1° |
O17 | C16 | C15 | H27 | 64.8° | 176.9° |
O17 | C16 | H28 | H29 | 119.3° | 120.1° |
C16 | O17 | C18 | H31 | 177.9° | 178.6° |
C16 | O17 | C18 | H30 | 58.2° | 61.3° |
C16 | C15 | H26 | H27 | 120.7° | 120.0° |
C15 | C16 | H28 | H29 | 119.4° | 120.1° |
H24 | C9 | C10 | H25 | 1.4° | 0.0° |
H26 | C15 | C16 | H28 | 65.0° | 177.0° |
H26 | C15 | C16 | H29 | 54.6° | 56.8° |
H27 | C15 | C16 | H28 | 55.4° | 56.9° |
H27 | C15 | C16 | H29 | 175.0° | 63.3° |
H33 | C19 | C18 | H31 | 63.3° | 63.3° |
H33 | C19 | C18 | H30 | 56.3° | 56.9° |
H32 | C19 | C18 | H31 | 57.3° | 56.8° |
H32 | C19 | C18 | H30 | 177.0° | 177.0° |