Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VYK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CNsing1.47Å1.48Å
CLC6sing1.74Å1.62Å
C6C7doub1.38Å1.39ÅAromatic
C6C5sing1.38Å1.34ÅAromatic
C7C2sing1.38Å1.36ÅAromatic
C5C4doub1.38Å1.35ÅAromatic
OC9doub1.21Å1.21Å
NC8sing1.47Å1.48Å
NC1sing1.47Å1.50Å
C2C3doub1.38Å1.34ÅAromatic
C2C1sing1.51Å1.39Å
C4C3sing1.38Å1.38ÅAromatic
C8C9sing1.51Å1.45Å
C9N1sing1.35Å1.36Å
N1H1sing0.97Å1.00Å
N1H2sing0.97Å1.00Å
C7H3sing1.08Å1.08Å
C8H4sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C1H6sing1.09Å1.10Å
C1H7sing1.09Å1.10Å
C5H8sing1.08Å1.08Å
C4H9sing1.08Å1.08Å
C3H10sing1.08Å1.08Å
CH12sing1.09Å1.10Å
CH13sing1.09Å1.10Å
CH14sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CNC8106.9°111.0°
CNC1110.6°111.0°
NCH12109.5°109.5°
NCH13109.5°109.4°
NCH14109.5°109.5°
CLC6C7119.0°120.0°
CLC6C5114.7°120.0°
C7C6C5125.3°119.9°
C6C7C2115.5°120.0°
C6C7H3122.2°120.0°
C6C5C4117.0°120.0°
C6C5H8121.5°120.0°
C7C2C3120.1°120.1°
C7C2C1123.0°120.0°
C2C7H3122.2°120.0°
C5C4C3119.3°120.1°
C4C5H8121.5°120.0°
C5C4H9120.4°120.0°
OC9C8117.7°120.0°
OC9N1127.2°120.0°
C8NC1103.5°111.0°
NC8C9106.0°109.4°
NC8H4110.4°109.5°
NC8H5110.3°109.5°
NC1C2109.3°109.5°
NC1H6109.5°109.5°
NC1H7109.5°109.4°
C3C2C1116.0°120.0°
C2C3C4122.2°120.0°
C2C3H10118.9°120.0°
C2C1H6109.5°109.5°
C2C1H7109.5°109.5°
C3C4H9120.4°119.9°
C4C3H10118.9°120.0°
C8C9N1115.1°120.0°
C9C8H4110.3°109.5°
C9C8H5110.3°109.4°
C9N1H1120.0°120.0°
C9N1H2120.0°120.0°
H1N1H2120.0°120.0°
H4C8H5109.5°109.5°
H6C1H7109.5°109.4°
H12CH13109.5°109.4°
H12CH14109.4°109.5°
H13CH14109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CNC8C1116.9°124.0°
CNC1C260.8°66.0°
CNC8C989.6°66.1°
CNC8H4151.0°53.9°
CNC8H529.9°174.0°
CNC1H659.2°173.9°
CNC1H7179.2°54.0°
NCH12H13120.0°119.9°
NCH12H14120.0°120.0°
NCH13H14120.0°120.0°
CLC6C7C5168.2°180.0°
CLC6C7C2159.1°180.0°
CLC6C5C4162.4°180.0°
CLC6C7H320.9°0.3°
CLC6C5H817.6°0.2°
C6C7C2H3180.0°179.7°
C7C6C5C46.3°0.0°
C6C7C2C34.6°0.3°
C6C7C2C1164.2°179.8°
C7C6C5H8173.7°179.8°
C5C6C7C29.1°0.0°
C6C5C4H8180.0°179.8°
C6C5C4C30.9°0.3°
C5C6C7H3170.9°179.7°
C6C5C4H9179.1°179.8°
C7C2C1N118.8°89.9°
C7C2C3C1169.6°179.9°
C7C2C3C41.9°0.6°
C7C2C1H61.2°150.0°
C7C2C1H7121.2°30.0°
C7C2C3H10178.1°179.9°
C5C4C3C24.9°0.6°
C5C4C3H9180.0°179.9°
C5C4C3H10175.1°179.9°
OC9C8N74.7°0.0°
OC9C8N1178.8°180.0°
OC9N1H10.0°180.0°
OC9N1H2180.0°0.3°
OC9C8H4165.8°120.0°
OC9C8H544.7°120.0°
C8NC1C2175.0°170.0°
NC8C9H4119.5°120.0°
NC8C9H5119.5°120.0°
NC8C9N1104.1°180.0°
NC8H4H5121.6°120.1°
C8NC1H655.0°49.9°
C8NC1H765.0°70.0°
C8NCH12180.0°60.0°
C8NCH1360.0°179.9°
C8NCH1460.0°60.0°
NC1C2C371.9°90.0°
NC1C2H6120.0°120.0°
NC1C2H7120.0°120.0°
C1NC8C9153.5°170.0°
C1NC8H434.1°70.0°
C1NC8H587.0°50.1°
NC1H6H7120.1°119.9°
C1NCH1267.9°64.0°
C1NCH13172.1°56.0°
C1NCH1452.1°176.0°
C2C3C4H10180.0°179.5°
C3C2C7H3175.3°180.0°
C3C2C1H6168.1°30.0°
C3C2C1H748.1°150.0°
C2C3C4H9175.1°179.5°
C1C2C3C4171.4°179.5°
C1C2C7H315.8°0.1°
C2C1H6H7120.0°120.0°
C1C2C3H108.6°0.0°
C3C4C5H8179.1°180.0°
C8C9N1H1178.6°0.0°
C8C9N1H21.4°179.7°
C9C8H4H5121.6°120.0°
C9N1H1H2180.0°179.8°
N1C9C8H415.4°60.0°
N1C9C8H5136.5°60.0°
H8C5C4H90.9°0.1°
H9C4C3H104.9°0.0°
H12CH13H14120.0°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon